Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0155

Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0154 and B158DRAFT_0155 are separated by 72 nucleotidesB158DRAFT_0155 and B158DRAFT_0156 are separated by 227 nucleotides B158DRAFT_0154: B158DRAFT_0154 - hypothetical protein, at 152,480 to 152,953 _0154 B158DRAFT_0155: B158DRAFT_0155 - Permeases of the drug/metabolite transporter (DMT) superfamily, at 153,026 to 154,012 _0155 B158DRAFT_0156: B158DRAFT_0156 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 154,240 to 154,950 _0156 Position (kb) 153 154 155Strain fitness (log2 ratio) -2 -1 0 1at 152.116 kb on - strandat 152.167 kb on - strandat 152.226 kb on + strandat 152.354 kb on + strandat 152.356 kb on + strandat 152.387 kb on - strandat 152.554 kb on + strand, within B158DRAFT_0154at 152.639 kb on + strand, within B158DRAFT_0154at 152.652 kb on - strand, within B158DRAFT_0154at 152.660 kb on + strand, within B158DRAFT_0154at 152.662 kb on - strand, within B158DRAFT_0154at 152.924 kb on - strandat 152.947 kb on + strandat 152.955 kb on - strandat 152.955 kb on - strandat 153.022 kb on - strandat 153.022 kb on - strandat 153.120 kb on + strandat 153.128 kb on - strand, within B158DRAFT_0155at 153.132 kb on + strand, within B158DRAFT_0155at 153.193 kb on + strand, within B158DRAFT_0155at 153.207 kb on - strand, within B158DRAFT_0155at 153.261 kb on + strand, within B158DRAFT_0155at 153.316 kb on - strand, within B158DRAFT_0155at 153.350 kb on + strand, within B158DRAFT_0155at 153.358 kb on - strand, within B158DRAFT_0155at 153.373 kb on + strand, within B158DRAFT_0155at 153.373 kb on + strand, within B158DRAFT_0155at 153.381 kb on - strand, within B158DRAFT_0155at 153.381 kb on - strand, within B158DRAFT_0155at 153.381 kb on - strand, within B158DRAFT_0155at 153.381 kb on - strand, within B158DRAFT_0155at 153.395 kb on - strand, within B158DRAFT_0155at 153.397 kb on + strand, within B158DRAFT_0155at 153.431 kb on - strand, within B158DRAFT_0155at 153.458 kb on - strand, within B158DRAFT_0155at 153.581 kb on + strand, within B158DRAFT_0155at 153.586 kb on + strand, within B158DRAFT_0155at 153.586 kb on + strand, within B158DRAFT_0155at 153.613 kb on + strand, within B158DRAFT_0155at 153.613 kb on + strand, within B158DRAFT_0155at 153.618 kb on - strand, within B158DRAFT_0155at 153.621 kb on - strand, within B158DRAFT_0155at 153.621 kb on - strand, within B158DRAFT_0155at 153.723 kb on - strand, within B158DRAFT_0155at 153.729 kb on + strand, within B158DRAFT_0155at 153.729 kb on + strand, within B158DRAFT_0155at 153.747 kb on - strand, within B158DRAFT_0155at 153.769 kb on - strand, within B158DRAFT_0155at 153.854 kb on + strand, within B158DRAFT_0155at 153.918 kb on + strandat 154.013 kb on + strandat 154.013 kb on + strandat 154.013 kb on + strandat 154.018 kb on + strandat 154.018 kb on + strandat 154.021 kb on - strandat 154.021 kb on - strandat 154.031 kb on - strandat 154.039 kb on - strandat 154.136 kb on + strandat 154.136 kb on + strandat 154.136 kb on + strandat 154.144 kb on - strandat 154.258 kb on - strandat 154.269 kb on + strandat 154.269 kb on + strandat 154.306 kb on - strandat 154.369 kb on - strand, within B158DRAFT_0156at 154.397 kb on + strand, within B158DRAFT_0156at 154.405 kb on - strand, within B158DRAFT_0156at 154.476 kb on + strand, within B158DRAFT_0156at 154.484 kb on - strand, within B158DRAFT_0156at 154.484 kb on - strand, within B158DRAFT_0156at 154.544 kb on + strand, within B158DRAFT_0156at 154.552 kb on - strand, within B158DRAFT_0156at 154.552 kb on - strand, within B158DRAFT_0156at 154.556 kb on + strand, within B158DRAFT_0156at 154.564 kb on - strand, within B158DRAFT_0156at 154.609 kb on + strand, within B158DRAFT_0156at 154.617 kb on - strand, within B158DRAFT_0156at 154.617 kb on - strand, within B158DRAFT_0156at 154.617 kb on - strand, within B158DRAFT_0156at 154.617 kb on - strand, within B158DRAFT_0156at 154.619 kb on + strand, within B158DRAFT_0156at 154.627 kb on - strand, within B158DRAFT_0156at 154.632 kb on - strand, within B158DRAFT_0156at 154.632 kb on - strand, within B158DRAFT_0156at 154.664 kb on + strand, within B158DRAFT_0156at 154.664 kb on + strand, within B158DRAFT_0156at 154.664 kb on + strand, within B158DRAFT_0156at 154.664 kb on + strand, within B158DRAFT_0156at 154.667 kb on - strand, within B158DRAFT_0156at 154.667 kb on - strand, within B158DRAFT_0156at 154.672 kb on - strand, within B158DRAFT_0156at 154.672 kb on - strand, within B158DRAFT_0156at 154.672 kb on - strand, within B158DRAFT_0156at 154.672 kb on - strand, within B158DRAFT_0156at 154.672 kb on - strand, within B158DRAFT_0156at 154.672 kb on - strand, within B158DRAFT_0156at 154.677 kb on - strand, within B158DRAFT_0156at 154.727 kb on - strand, within B158DRAFT_0156at 154.853 kb on + strand, within B158DRAFT_0156at 154.861 kb on - strand, within B158DRAFT_0156at 154.861 kb on - strand, within B158DRAFT_0156

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml
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152,116 - +0.3
152,167 - +0.2
152,226 + +0.4
152,354 + +1.4
152,356 + -0.2
152,387 - -1.3
152,554 + B158DRAFT_0154 0.16 -0.4
152,639 + B158DRAFT_0154 0.34 -0.5
152,652 - B158DRAFT_0154 0.36 +0.5
152,660 + B158DRAFT_0154 0.38 -0.3
152,662 - B158DRAFT_0154 0.38 +0.3
152,924 - -1.2
152,947 + -0.2
152,955 - -0.3
152,955 - -0.3
153,022 - -0.6
153,022 - -0.4
153,120 + -0.1
153,128 - B158DRAFT_0155 0.10 -0.1
153,132 + B158DRAFT_0155 0.11 -0.0
153,193 + B158DRAFT_0155 0.17 +0.3
153,207 - B158DRAFT_0155 0.18 -0.0
153,261 + B158DRAFT_0155 0.24 -0.1
153,316 - B158DRAFT_0155 0.29 +0.2
153,350 + B158DRAFT_0155 0.33 +0.0
153,358 - B158DRAFT_0155 0.34 +0.1
153,373 + B158DRAFT_0155 0.35 +0.1
153,373 + B158DRAFT_0155 0.35 +0.7
153,381 - B158DRAFT_0155 0.36 +0.1
153,381 - B158DRAFT_0155 0.36 +0.4
153,381 - B158DRAFT_0155 0.36 -0.1
153,381 - B158DRAFT_0155 0.36 +0.0
153,395 - B158DRAFT_0155 0.37 +0.8
153,397 + B158DRAFT_0155 0.38 -0.3
153,431 - B158DRAFT_0155 0.41 -0.8
153,458 - B158DRAFT_0155 0.44 +0.1
153,581 + B158DRAFT_0155 0.56 -0.0
153,586 + B158DRAFT_0155 0.57 +0.4
153,586 + B158DRAFT_0155 0.57 -1.0
153,613 + B158DRAFT_0155 0.59 +0.0
153,613 + B158DRAFT_0155 0.59 +0.2
153,618 - B158DRAFT_0155 0.60 +0.0
153,621 - B158DRAFT_0155 0.60 -0.0
153,621 - B158DRAFT_0155 0.60 -0.7
153,723 - B158DRAFT_0155 0.71 -0.3
153,729 + B158DRAFT_0155 0.71 +0.1
153,729 + B158DRAFT_0155 0.71 -0.2
153,747 - B158DRAFT_0155 0.73 +0.5
153,769 - B158DRAFT_0155 0.75 +0.4
153,854 + B158DRAFT_0155 0.84 +0.9
153,918 + -1.2
154,013 + +0.2
154,013 + -0.0
154,013 + +0.2
154,018 + -0.1
154,018 + +0.7
154,021 - +0.4
154,021 - -0.2
154,031 - +0.1
154,039 - -0.3
154,136 + -0.8
154,136 + +0.2
154,136 + -0.1
154,144 - -0.1
154,258 - -0.4
154,269 + +0.1
154,269 + +0.0
154,306 - -0.9
154,369 - B158DRAFT_0156 0.18 -0.6
154,397 + B158DRAFT_0156 0.22 -0.9
154,405 - B158DRAFT_0156 0.23 -0.1
154,476 + B158DRAFT_0156 0.33 -0.6
154,484 - B158DRAFT_0156 0.34 +0.1
154,484 - B158DRAFT_0156 0.34 -1.6
154,544 + B158DRAFT_0156 0.43 -0.3
154,552 - B158DRAFT_0156 0.44 +0.0
154,552 - B158DRAFT_0156 0.44 -1.3
154,556 + B158DRAFT_0156 0.44 +0.4
154,564 - B158DRAFT_0156 0.46 +0.2
154,609 + B158DRAFT_0156 0.52 -0.6
154,617 - B158DRAFT_0156 0.53 -0.5
154,617 - B158DRAFT_0156 0.53 -0.1
154,617 - B158DRAFT_0156 0.53 +0.2
154,617 - B158DRAFT_0156 0.53 -0.6
154,619 + B158DRAFT_0156 0.53 -0.1
154,627 - B158DRAFT_0156 0.54 -0.2
154,632 - B158DRAFT_0156 0.55 +0.1
154,632 - B158DRAFT_0156 0.55 -0.0
154,664 + B158DRAFT_0156 0.60 -0.7
154,664 + B158DRAFT_0156 0.60 +0.0
154,664 + B158DRAFT_0156 0.60 -0.5
154,664 + B158DRAFT_0156 0.60 +0.4
154,667 - B158DRAFT_0156 0.60 -0.2
154,667 - B158DRAFT_0156 0.60 -0.0
154,672 - B158DRAFT_0156 0.61 -0.6
154,672 - B158DRAFT_0156 0.61 +0.4
154,672 - B158DRAFT_0156 0.61 +0.4
154,672 - B158DRAFT_0156 0.61 +0.5
154,672 - B158DRAFT_0156 0.61 -0.8
154,672 - B158DRAFT_0156 0.61 +0.0
154,677 - B158DRAFT_0156 0.61 -0.0
154,727 - B158DRAFT_0156 0.68 -0.9
154,853 + B158DRAFT_0156 0.86 -0.4
154,861 - B158DRAFT_0156 0.87 +0.0
154,861 - B158DRAFT_0156 0.87 -1.9

Or see this region's nucleotide sequence