Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2338

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2337 and B158DRAFT_2338 are separated by 23 nucleotidesB158DRAFT_2338 and B158DRAFT_2339 are separated by 157 nucleotidesB158DRAFT_2339 and B158DRAFT_2340 are separated by 92 nucleotides B158DRAFT_2337: B158DRAFT_2337 - Sulfate permease and related transporters (MFS superfamily), at 501,892 to 503,382 _2337 B158DRAFT_2338: B158DRAFT_2338 - Universal stress protein UspA and related nucleotide-binding proteins, at 503,406 to 504,257 _2338 B158DRAFT_2339: B158DRAFT_2339 - tRNA_Asn_GTT, at 504,415 to 504,490 _2339 B158DRAFT_2340: B158DRAFT_2340 - Aspartate/tyrosine/aromatic aminotransferase, at 504,583 to 505,761 _2340 Position (kb) 503 504 505Strain fitness (log2 ratio) -3 -2 -1 0 1at 502.413 kb on + strand, within B158DRAFT_2337at 502.427 kb on + strand, within B158DRAFT_2337at 502.455 kb on - strand, within B158DRAFT_2337at 502.463 kb on + strand, within B158DRAFT_2337at 502.463 kb on + strand, within B158DRAFT_2337at 502.463 kb on + strand, within B158DRAFT_2337at 502.471 kb on - strand, within B158DRAFT_2337at 502.471 kb on - strand, within B158DRAFT_2337at 502.478 kb on + strand, within B158DRAFT_2337at 502.581 kb on - strand, within B158DRAFT_2337at 502.639 kb on + strand, within B158DRAFT_2337at 502.670 kb on - strand, within B158DRAFT_2337at 502.677 kb on - strand, within B158DRAFT_2337at 502.696 kb on + strand, within B158DRAFT_2337at 502.704 kb on - strand, within B158DRAFT_2337at 502.704 kb on - strand, within B158DRAFT_2337at 502.713 kb on - strand, within B158DRAFT_2337at 502.798 kb on + strand, within B158DRAFT_2337at 502.981 kb on + strand, within B158DRAFT_2337at 502.990 kb on - strand, within B158DRAFT_2337at 502.990 kb on - strand, within B158DRAFT_2337at 502.992 kb on + strand, within B158DRAFT_2337at 503.004 kb on + strand, within B158DRAFT_2337at 503.004 kb on + strand, within B158DRAFT_2337at 503.004 kb on + strand, within B158DRAFT_2337at 503.022 kb on - strand, within B158DRAFT_2337at 503.026 kb on + strand, within B158DRAFT_2337at 503.026 kb on + strand, within B158DRAFT_2337at 503.026 kb on + strand, within B158DRAFT_2337at 503.034 kb on - strand, within B158DRAFT_2337at 503.034 kb on - strand, within B158DRAFT_2337at 503.034 kb on - strand, within B158DRAFT_2337at 503.034 kb on - strand, within B158DRAFT_2337at 503.034 kb on - strand, within B158DRAFT_2337at 503.034 kb on - strand, within B158DRAFT_2337at 503.034 kb on - strand, within B158DRAFT_2337at 503.110 kb on - strand, within B158DRAFT_2337at 503.110 kb on - strand, within B158DRAFT_2337at 503.201 kb on + strand, within B158DRAFT_2337at 503.211 kb on + strand, within B158DRAFT_2337at 503.211 kb on + strand, within B158DRAFT_2337at 503.219 kb on + strand, within B158DRAFT_2337at 503.278 kb on + strandat 503.288 kb on + strandat 503.298 kb on + strandat 503.298 kb on + strandat 503.305 kb on + strandat 503.306 kb on - strandat 503.328 kb on + strandat 503.328 kb on + strandat 503.364 kb on + strandat 503.364 kb on + strandat 503.372 kb on - strandat 503.372 kb on - strandat 503.384 kb on - strandat 503.389 kb on + strandat 503.439 kb on + strandat 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.568 kb on - strand, within B158DRAFT_2338at 503.669 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.821 kb on - strand, within B158DRAFT_2338at 503.821 kb on - strand, within B158DRAFT_2338at 503.823 kb on - strand, within B158DRAFT_2338at 503.872 kb on + strand, within B158DRAFT_2338at 503.872 kb on + strand, within B158DRAFT_2338at 503.880 kb on - strand, within B158DRAFT_2338at 503.970 kb on - strand, within B158DRAFT_2338at 503.977 kb on + strand, within B158DRAFT_2338at 503.985 kb on - strand, within B158DRAFT_2338at 504.000 kb on - strand, within B158DRAFT_2338at 504.061 kb on + strand, within B158DRAFT_2338at 504.061 kb on + strand, within B158DRAFT_2338at 504.069 kb on - strand, within B158DRAFT_2338at 504.069 kb on - strand, within B158DRAFT_2338at 504.073 kb on + strand, within B158DRAFT_2338at 504.075 kb on + strand, within B158DRAFT_2338at 504.083 kb on - strand, within B158DRAFT_2338at 504.093 kb on - strand, within B158DRAFT_2338at 504.135 kb on - strand, within B158DRAFT_2338at 504.160 kb on - strand, within B158DRAFT_2338at 504.215 kb on - strandat 504.273 kb on + strandat 504.282 kb on - strandat 504.353 kb on + strandat 504.403 kb on - strandat 504.643 kb on + strandat 504.651 kb on - strandat 504.845 kb on + strand, within B158DRAFT_2340at 505.012 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.092 kb on + strand, within B158DRAFT_2340at 505.116 kb on + strand, within B158DRAFT_2340at 505.128 kb on + strand, within B158DRAFT_2340at 505.192 kb on - strand, within B158DRAFT_2340at 505.226 kb on - strand, within B158DRAFT_2340at 505.236 kb on + strand, within B158DRAFT_2340

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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502,413 + B158DRAFT_2337 0.35 -0.1
502,427 + B158DRAFT_2337 0.36 +0.4
502,455 - B158DRAFT_2337 0.38 -0.4
502,463 + B158DRAFT_2337 0.38 +0.4
502,463 + B158DRAFT_2337 0.38 -0.2
502,463 + B158DRAFT_2337 0.38 +0.4
502,471 - B158DRAFT_2337 0.39 -0.2
502,471 - B158DRAFT_2337 0.39 -0.2
502,478 + B158DRAFT_2337 0.39 +0.3
502,581 - B158DRAFT_2337 0.46 -0.6
502,639 + B158DRAFT_2337 0.50 -0.2
502,670 - B158DRAFT_2337 0.52 +0.2
502,677 - B158DRAFT_2337 0.53 -0.1
502,696 + B158DRAFT_2337 0.54 -0.4
502,704 - B158DRAFT_2337 0.54 -0.1
502,704 - B158DRAFT_2337 0.54 +0.2
502,713 - B158DRAFT_2337 0.55 +0.4
502,798 + B158DRAFT_2337 0.61 -0.3
502,981 + B158DRAFT_2337 0.73 +0.1
502,990 - B158DRAFT_2337 0.74 +0.1
502,990 - B158DRAFT_2337 0.74 -0.1
502,992 + B158DRAFT_2337 0.74 -0.3
503,004 + B158DRAFT_2337 0.75 -0.4
503,004 + B158DRAFT_2337 0.75 -1.2
503,004 + B158DRAFT_2337 0.75 -0.5
503,022 - B158DRAFT_2337 0.76 -0.8
503,026 + B158DRAFT_2337 0.76 +0.1
503,026 + B158DRAFT_2337 0.76 +0.3
503,026 + B158DRAFT_2337 0.76 +0.1
503,034 - B158DRAFT_2337 0.77 -0.3
503,034 - B158DRAFT_2337 0.77 -0.2
503,034 - B158DRAFT_2337 0.77 -0.8
503,034 - B158DRAFT_2337 0.77 +0.1
503,034 - B158DRAFT_2337 0.77 -0.6
503,034 - B158DRAFT_2337 0.77 +0.2
503,034 - B158DRAFT_2337 0.77 -0.0
503,110 - B158DRAFT_2337 0.82 -0.1
503,110 - B158DRAFT_2337 0.82 -0.7
503,201 + B158DRAFT_2337 0.88 -0.9
503,211 + B158DRAFT_2337 0.88 -0.3
503,211 + B158DRAFT_2337 0.88 +0.8
503,219 + B158DRAFT_2337 0.89 +0.4
503,278 + -0.5
503,288 + +0.4
503,298 + -0.2
503,298 + -0.3
503,305 + +0.3
503,306 - +0.5
503,328 + -0.0
503,328 + -0.5
503,364 + +0.0
503,364 + -0.1
503,372 - -0.4
503,372 - +0.1
503,384 - -0.0
503,389 + -0.0
503,439 + +0.2
503,496 + B158DRAFT_2338 0.11 +0.0
503,496 + B158DRAFT_2338 0.11 -0.9
503,496 + B158DRAFT_2338 0.11 -0.3
503,496 + B158DRAFT_2338 0.11 +0.4
503,496 + B158DRAFT_2338 0.11 -0.7
503,504 - B158DRAFT_2338 0.12 +1.1
503,504 - B158DRAFT_2338 0.12 +0.0
503,504 - B158DRAFT_2338 0.12 +0.3
503,504 - B158DRAFT_2338 0.12 +0.2
503,504 - B158DRAFT_2338 0.12 -0.2
503,504 - B158DRAFT_2338 0.12 -0.7
503,504 - B158DRAFT_2338 0.12 -0.0
503,504 - B158DRAFT_2338 0.12 -0.1
503,504 - B158DRAFT_2338 0.12 +0.2
503,504 - B158DRAFT_2338 0.12 -0.4
503,568 - B158DRAFT_2338 0.19 -0.1
503,669 + B158DRAFT_2338 0.31 -0.5
503,813 + B158DRAFT_2338 0.48 -0.3
503,813 + B158DRAFT_2338 0.48 -0.6
503,813 + B158DRAFT_2338 0.48 +0.4
503,813 + B158DRAFT_2338 0.48 +0.3
503,813 + B158DRAFT_2338 0.48 -0.9
503,821 - B158DRAFT_2338 0.49 -0.2
503,821 - B158DRAFT_2338 0.49 +0.3
503,823 - B158DRAFT_2338 0.49 -0.3
503,872 + B158DRAFT_2338 0.55 -1.4
503,872 + B158DRAFT_2338 0.55 -0.3
503,880 - B158DRAFT_2338 0.56 -1.3
503,970 - B158DRAFT_2338 0.66 -0.4
503,977 + B158DRAFT_2338 0.67 +1.3
503,985 - B158DRAFT_2338 0.68 -0.3
504,000 - B158DRAFT_2338 0.70 -0.3
504,061 + B158DRAFT_2338 0.77 -0.1
504,061 + B158DRAFT_2338 0.77 +0.1
504,069 - B158DRAFT_2338 0.78 -0.2
504,069 - B158DRAFT_2338 0.78 -0.7
504,073 + B158DRAFT_2338 0.78 +0.4
504,075 + B158DRAFT_2338 0.79 -0.1
504,083 - B158DRAFT_2338 0.79 -0.6
504,093 - B158DRAFT_2338 0.81 +0.5
504,135 - B158DRAFT_2338 0.86 -0.3
504,160 - B158DRAFT_2338 0.88 +0.0
504,215 - +0.2
504,273 + -0.5
504,282 - +0.0
504,353 + +0.0
504,403 - -0.5
504,643 + -1.3
504,651 - -1.3
504,845 + B158DRAFT_2340 0.22 -3.2
505,012 + B158DRAFT_2340 0.36 -1.1
505,080 + B158DRAFT_2340 0.42 -0.7
505,080 + B158DRAFT_2340 0.42 -2.4
505,080 + B158DRAFT_2340 0.42 -1.9
505,080 + B158DRAFT_2340 0.42 -0.4
505,080 + B158DRAFT_2340 0.42 -2.4
505,088 - B158DRAFT_2340 0.43 -1.9
505,088 - B158DRAFT_2340 0.43 -2.3
505,088 - B158DRAFT_2340 0.43 -3.0
505,092 + B158DRAFT_2340 0.43 +0.5
505,116 + B158DRAFT_2340 0.45 -2.7
505,128 + B158DRAFT_2340 0.46 -2.1
505,192 - B158DRAFT_2340 0.52 -3.6
505,226 - B158DRAFT_2340 0.55 -2.1
505,236 + B158DRAFT_2340 0.55 -1.0

Or see this region's nucleotide sequence