Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2066

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2065 and B158DRAFT_2066 are separated by 145 nucleotidesB158DRAFT_2066 and B158DRAFT_2067 are separated by 3 nucleotidesB158DRAFT_2067 and B158DRAFT_2068 are separated by 61 nucleotides B158DRAFT_2065: B158DRAFT_2065 - cell shape determining protein, MreB/Mrl family, at 200,838 to 201,881 _2065 B158DRAFT_2066: B158DRAFT_2066 - rod shape-determining protein MreC, at 202,027 to 202,815 _2066 B158DRAFT_2067: B158DRAFT_2067 - rod shape-determining protein MreD, at 202,819 to 203,316 _2067 B158DRAFT_2068: B158DRAFT_2068 - MAF protein, at 203,378 to 204,007 _2068 Position (kb) 202 203Strain fitness (log2 ratio) -1 0 1at 202.749 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.310 kb on + strandat 203.318 kb on - strandat 203.318 kb on - strandat 203.318 kb on - strandat 203.318 kb on - strandat 203.318 kb on - strandat 203.318 kb on - strandat 203.318 kb on - strandat 203.318 kb on - strandat 203.321 kb on + strandat 203.328 kb on - strandat 203.328 kb on - strandat 203.380 kb on - strandat 203.380 kb on - strandat 203.412 kb on - strandat 203.449 kb on - strand, within B158DRAFT_2068at 203.496 kb on + strand, within B158DRAFT_2068at 203.501 kb on + strand, within B158DRAFT_2068at 203.501 kb on + strand, within B158DRAFT_2068at 203.509 kb on - strand, within B158DRAFT_2068at 203.531 kb on + strand, within B158DRAFT_2068at 203.606 kb on - strand, within B158DRAFT_2068at 203.647 kb on - strand, within B158DRAFT_2068at 203.682 kb on + strand, within B158DRAFT_2068at 203.692 kb on + strand, within B158DRAFT_2068at 203.695 kb on + strand, within B158DRAFT_2068at 203.700 kb on - strand, within B158DRAFT_2068at 203.700 kb on - strand, within B158DRAFT_2068at 203.700 kb on - strand, within B158DRAFT_2068at 203.710 kb on - strand, within B158DRAFT_2068at 203.711 kb on - strand, within B158DRAFT_2068

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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202,749 + +0.8
203,310 + +0.8
203,310 + -0.3
203,310 + +0.0
203,310 + -0.5
203,310 + +0.3
203,310 + +0.5
203,310 + +0.3
203,310 + -0.1
203,310 + -0.2
203,318 - +0.9
203,318 - +1.1
203,318 - +0.5
203,318 - +0.5
203,318 - +0.8
203,318 - +0.6
203,318 - +0.8
203,318 - +1.0
203,321 + +0.1
203,328 - +1.0
203,328 - +0.9
203,380 - +0.5
203,380 - +0.7
203,412 - +0.2
203,449 - B158DRAFT_2068 0.11 +1.1
203,496 + B158DRAFT_2068 0.19 +0.7
203,501 + B158DRAFT_2068 0.20 +0.1
203,501 + B158DRAFT_2068 0.20 +0.4
203,509 - B158DRAFT_2068 0.21 +0.5
203,531 + B158DRAFT_2068 0.24 +0.0
203,606 - B158DRAFT_2068 0.36 +0.7
203,647 - B158DRAFT_2068 0.43 +0.8
203,682 + B158DRAFT_2068 0.48 +0.3
203,692 + B158DRAFT_2068 0.50 -0.3
203,695 + B158DRAFT_2068 0.50 +0.2
203,700 - B158DRAFT_2068 0.51 +0.7
203,700 - B158DRAFT_2068 0.51 +0.4
203,700 - B158DRAFT_2068 0.51 +0.5
203,710 - B158DRAFT_2068 0.53 +0.5
203,711 - B158DRAFT_2068 0.53 -0.1

Or see this region's nucleotide sequence