Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1792

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1790 and B158DRAFT_1791 are separated by 129 nucleotidesB158DRAFT_1791 and B158DRAFT_1792 are separated by 294 nucleotidesB158DRAFT_1792 and B158DRAFT_1793 are separated by 45 nucleotides B158DRAFT_1790: B158DRAFT_1790 - hypothetical protein, at 1,884,398 to 1,884,928 _1790 B158DRAFT_1791: B158DRAFT_1791 - hypothetical protein, at 1,885,058 to 1,885,573 _1791 B158DRAFT_1792: B158DRAFT_1792 - L-asparaginases, type I, at 1,885,868 to 1,886,887 _1792 B158DRAFT_1793: B158DRAFT_1793 - Alanine dehydrogenase, at 1,886,933 to 1,888,189 _1793 Position (kb) 1885 1886 1887Strain fitness (log2 ratio) -2 -1 0 1at 1885.044 kb on + strandat 1885.178 kb on + strand, within B158DRAFT_1791at 1885.306 kb on + strand, within B158DRAFT_1791at 1885.306 kb on + strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.414 kb on + strand, within B158DRAFT_1791at 1885.447 kb on - strand, within B158DRAFT_1791at 1885.454 kb on - strand, within B158DRAFT_1791at 1885.695 kb on + strandat 1885.849 kb on + strandat 1885.913 kb on - strandat 1885.929 kb on - strandat 1886.058 kb on + strand, within B158DRAFT_1792at 1886.067 kb on - strand, within B158DRAFT_1792at 1886.118 kb on + strand, within B158DRAFT_1792at 1886.118 kb on + strand, within B158DRAFT_1792at 1886.126 kb on - strand, within B158DRAFT_1792at 1886.157 kb on - strand, within B158DRAFT_1792at 1886.263 kb on + strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.287 kb on + strand, within B158DRAFT_1792at 1886.363 kb on + strand, within B158DRAFT_1792at 1886.410 kb on - strand, within B158DRAFT_1792at 1886.416 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.458 kb on + strand, within B158DRAFT_1792at 1886.577 kb on - strand, within B158DRAFT_1792at 1886.587 kb on - strand, within B158DRAFT_1792at 1886.587 kb on - strand, within B158DRAFT_1792at 1886.816 kb on + strandat 1886.969 kb on + strandat 1886.977 kb on - strandat 1886.977 kb on - strandat 1887.005 kb on + strandat 1887.019 kb on - strandat 1887.064 kb on - strand, within B158DRAFT_1793at 1887.082 kb on - strand, within B158DRAFT_1793at 1887.107 kb on + strand, within B158DRAFT_1793at 1887.112 kb on + strand, within B158DRAFT_1793at 1887.151 kb on + strand, within B158DRAFT_1793at 1887.172 kb on - strand, within B158DRAFT_1793at 1887.215 kb on + strand, within B158DRAFT_1793at 1887.228 kb on + strand, within B158DRAFT_1793at 1887.237 kb on - strand, within B158DRAFT_1793at 1887.249 kb on - strand, within B158DRAFT_1793at 1887.336 kb on + strand, within B158DRAFT_1793at 1887.344 kb on - strand, within B158DRAFT_1793at 1887.372 kb on + strand, within B158DRAFT_1793at 1887.372 kb on + strand, within B158DRAFT_1793at 1887.391 kb on - strand, within B158DRAFT_1793at 1887.391 kb on - strand, within B158DRAFT_1793at 1887.415 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.498 kb on + strand, within B158DRAFT_1793at 1887.504 kb on - strand, within B158DRAFT_1793at 1887.518 kb on - strand, within B158DRAFT_1793at 1887.543 kb on + strand, within B158DRAFT_1793at 1887.543 kb on + strand, within B158DRAFT_1793at 1887.543 kb on + strand, within B158DRAFT_1793at 1887.560 kb on + strand, within B158DRAFT_1793at 1887.577 kb on + strand, within B158DRAFT_1793at 1887.577 kb on + strand, within B158DRAFT_1793at 1887.585 kb on - strand, within B158DRAFT_1793at 1887.585 kb on - strand, within B158DRAFT_1793at 1887.636 kb on + strand, within B158DRAFT_1793at 1887.654 kb on - strand, within B158DRAFT_1793at 1887.692 kb on - strand, within B158DRAFT_1793at 1887.700 kb on - strand, within B158DRAFT_1793at 1887.725 kb on + strand, within B158DRAFT_1793at 1887.733 kb on - strand, within B158DRAFT_1793

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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1,885,044 + +0.4
1,885,178 + B158DRAFT_1791 0.23 -0.3
1,885,306 + B158DRAFT_1791 0.48 -0.0
1,885,306 + B158DRAFT_1791 0.48 -1.0
1,885,314 - B158DRAFT_1791 0.50 +0.0
1,885,314 - B158DRAFT_1791 0.50 -1.8
1,885,314 - B158DRAFT_1791 0.50 -0.5
1,885,314 - B158DRAFT_1791 0.50 -0.9
1,885,414 + B158DRAFT_1791 0.69 -0.6
1,885,447 - B158DRAFT_1791 0.75 +0.5
1,885,454 - B158DRAFT_1791 0.77 +0.2
1,885,695 + +0.4
1,885,849 + -0.1
1,885,913 - +0.2
1,885,929 - -0.2
1,886,058 + B158DRAFT_1792 0.19 +0.0
1,886,067 - B158DRAFT_1792 0.20 -0.1
1,886,118 + B158DRAFT_1792 0.25 +0.0
1,886,118 + B158DRAFT_1792 0.25 -0.4
1,886,126 - B158DRAFT_1792 0.25 +0.4
1,886,157 - B158DRAFT_1792 0.28 -0.1
1,886,263 + B158DRAFT_1792 0.39 -0.2
1,886,271 - B158DRAFT_1792 0.40 +0.0
1,886,271 - B158DRAFT_1792 0.40 -0.5
1,886,271 - B158DRAFT_1792 0.40 +0.0
1,886,287 + B158DRAFT_1792 0.41 +0.1
1,886,363 + B158DRAFT_1792 0.49 -0.2
1,886,410 - B158DRAFT_1792 0.53 -0.4
1,886,416 + B158DRAFT_1792 0.54 -0.7
1,886,424 + B158DRAFT_1792 0.55 +0.4
1,886,424 + B158DRAFT_1792 0.55 -0.1
1,886,424 + B158DRAFT_1792 0.55 -0.1
1,886,424 + B158DRAFT_1792 0.55 +0.8
1,886,424 + B158DRAFT_1792 0.55 -0.0
1,886,424 + B158DRAFT_1792 0.55 -0.5
1,886,424 + B158DRAFT_1792 0.55 +0.3
1,886,424 + B158DRAFT_1792 0.55 +0.1
1,886,432 - B158DRAFT_1792 0.55 -0.0
1,886,432 - B158DRAFT_1792 0.55 +0.1
1,886,432 - B158DRAFT_1792 0.55 -0.8
1,886,432 - B158DRAFT_1792 0.55 -0.4
1,886,432 - B158DRAFT_1792 0.55 -0.0
1,886,432 - B158DRAFT_1792 0.55 -0.1
1,886,458 + B158DRAFT_1792 0.58 +0.1
1,886,577 - B158DRAFT_1792 0.70 -0.0
1,886,587 - B158DRAFT_1792 0.70 -0.3
1,886,587 - B158DRAFT_1792 0.70 -0.2
1,886,816 + -0.2
1,886,969 + -0.3
1,886,977 - -1.7
1,886,977 - -0.1
1,887,005 + -0.8
1,887,019 - -0.1
1,887,064 - B158DRAFT_1793 0.10 -1.2
1,887,082 - B158DRAFT_1793 0.12 -0.4
1,887,107 + B158DRAFT_1793 0.14 -0.7
1,887,112 + B158DRAFT_1793 0.14 -0.5
1,887,151 + B158DRAFT_1793 0.17 -0.5
1,887,172 - B158DRAFT_1793 0.19 -0.5
1,887,215 + B158DRAFT_1793 0.22 -1.0
1,887,228 + B158DRAFT_1793 0.23 -0.7
1,887,237 - B158DRAFT_1793 0.24 -0.1
1,887,249 - B158DRAFT_1793 0.25 -1.2
1,887,336 + B158DRAFT_1793 0.32 -1.7
1,887,344 - B158DRAFT_1793 0.33 -0.8
1,887,372 + B158DRAFT_1793 0.35 -1.2
1,887,372 + B158DRAFT_1793 0.35 -0.1
1,887,391 - B158DRAFT_1793 0.36 -1.3
1,887,391 - B158DRAFT_1793 0.36 -0.9
1,887,415 + B158DRAFT_1793 0.38 -1.4
1,887,488 + B158DRAFT_1793 0.44 -1.5
1,887,488 + B158DRAFT_1793 0.44 -0.5
1,887,488 + B158DRAFT_1793 0.44 -0.9
1,887,488 + B158DRAFT_1793 0.44 -1.5
1,887,488 + B158DRAFT_1793 0.44 -0.9
1,887,488 + B158DRAFT_1793 0.44 -0.5
1,887,488 + B158DRAFT_1793 0.44 -0.9
1,887,488 + B158DRAFT_1793 0.44 -0.8
1,887,488 + B158DRAFT_1793 0.44 -1.6
1,887,488 + B158DRAFT_1793 0.44 -0.7
1,887,496 - B158DRAFT_1793 0.45 -0.4
1,887,496 - B158DRAFT_1793 0.45 -1.4
1,887,496 - B158DRAFT_1793 0.45 +0.0
1,887,496 - B158DRAFT_1793 0.45 +0.3
1,887,496 - B158DRAFT_1793 0.45 -1.2
1,887,496 - B158DRAFT_1793 0.45 -0.6
1,887,496 - B158DRAFT_1793 0.45 -0.9
1,887,498 + B158DRAFT_1793 0.45 -2.2
1,887,504 - B158DRAFT_1793 0.45 -0.3
1,887,518 - B158DRAFT_1793 0.47 -1.0
1,887,543 + B158DRAFT_1793 0.49 -0.8
1,887,543 + B158DRAFT_1793 0.49 +0.0
1,887,543 + B158DRAFT_1793 0.49 -0.2
1,887,560 + B158DRAFT_1793 0.50 -0.8
1,887,577 + B158DRAFT_1793 0.51 -0.8
1,887,577 + B158DRAFT_1793 0.51 +0.8
1,887,585 - B158DRAFT_1793 0.52 -0.3
1,887,585 - B158DRAFT_1793 0.52 -0.5
1,887,636 + B158DRAFT_1793 0.56 -0.6
1,887,654 - B158DRAFT_1793 0.57 -0.4
1,887,692 - B158DRAFT_1793 0.60 -0.7
1,887,700 - B158DRAFT_1793 0.61 -0.6
1,887,725 + B158DRAFT_1793 0.63 -1.2
1,887,733 - B158DRAFT_1793 0.64 -0.4

Or see this region's nucleotide sequence