Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1791

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1789 and B158DRAFT_1790 are separated by 56 nucleotidesB158DRAFT_1790 and B158DRAFT_1791 are separated by 129 nucleotidesB158DRAFT_1791 and B158DRAFT_1792 are separated by 294 nucleotides B158DRAFT_1789: B158DRAFT_1789 - hypothetical protein, at 1,883,823 to 1,884,341 _1789 B158DRAFT_1790: B158DRAFT_1790 - hypothetical protein, at 1,884,398 to 1,884,928 _1790 B158DRAFT_1791: B158DRAFT_1791 - hypothetical protein, at 1,885,058 to 1,885,573 _1791 B158DRAFT_1792: B158DRAFT_1792 - L-asparaginases, type I, at 1,885,868 to 1,886,887 _1792 Position (kb) 1885 1886Strain fitness (log2 ratio) -2 -1 0 1at 1884.090 kb on - strand, within B158DRAFT_1789at 1884.221 kb on + strand, within B158DRAFT_1789at 1884.223 kb on + strand, within B158DRAFT_1789at 1884.413 kb on + strandat 1884.413 kb on + strandat 1884.421 kb on - strandat 1884.584 kb on - strand, within B158DRAFT_1790at 1884.584 kb on - strand, within B158DRAFT_1790at 1884.710 kb on - strand, within B158DRAFT_1790at 1885.044 kb on + strandat 1885.178 kb on + strand, within B158DRAFT_1791at 1885.306 kb on + strand, within B158DRAFT_1791at 1885.306 kb on + strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.314 kb on - strand, within B158DRAFT_1791at 1885.414 kb on + strand, within B158DRAFT_1791at 1885.447 kb on - strand, within B158DRAFT_1791at 1885.454 kb on - strand, within B158DRAFT_1791at 1885.695 kb on + strandat 1885.849 kb on + strandat 1885.913 kb on - strandat 1885.929 kb on - strandat 1886.058 kb on + strand, within B158DRAFT_1792at 1886.067 kb on - strand, within B158DRAFT_1792at 1886.118 kb on + strand, within B158DRAFT_1792at 1886.118 kb on + strand, within B158DRAFT_1792at 1886.126 kb on - strand, within B158DRAFT_1792at 1886.157 kb on - strand, within B158DRAFT_1792at 1886.263 kb on + strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.287 kb on + strand, within B158DRAFT_1792at 1886.363 kb on + strand, within B158DRAFT_1792at 1886.410 kb on - strand, within B158DRAFT_1792at 1886.416 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.458 kb on + strand, within B158DRAFT_1792

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
remove
1,884,090 - B158DRAFT_1789 0.51 -0.1
1,884,221 + B158DRAFT_1789 0.77 -0.5
1,884,223 + B158DRAFT_1789 0.77 -0.2
1,884,413 + -0.6
1,884,413 + +0.1
1,884,421 - +0.1
1,884,584 - B158DRAFT_1790 0.35 -0.3
1,884,584 - B158DRAFT_1790 0.35 +0.4
1,884,710 - B158DRAFT_1790 0.59 +0.2
1,885,044 + +0.4
1,885,178 + B158DRAFT_1791 0.23 -0.3
1,885,306 + B158DRAFT_1791 0.48 -0.0
1,885,306 + B158DRAFT_1791 0.48 -1.0
1,885,314 - B158DRAFT_1791 0.50 +0.0
1,885,314 - B158DRAFT_1791 0.50 -1.8
1,885,314 - B158DRAFT_1791 0.50 -0.5
1,885,314 - B158DRAFT_1791 0.50 -0.9
1,885,414 + B158DRAFT_1791 0.69 -0.6
1,885,447 - B158DRAFT_1791 0.75 +0.5
1,885,454 - B158DRAFT_1791 0.77 +0.2
1,885,695 + +0.4
1,885,849 + -0.1
1,885,913 - +0.2
1,885,929 - -0.2
1,886,058 + B158DRAFT_1792 0.19 +0.0
1,886,067 - B158DRAFT_1792 0.20 -0.1
1,886,118 + B158DRAFT_1792 0.25 +0.0
1,886,118 + B158DRAFT_1792 0.25 -0.4
1,886,126 - B158DRAFT_1792 0.25 +0.4
1,886,157 - B158DRAFT_1792 0.28 -0.1
1,886,263 + B158DRAFT_1792 0.39 -0.2
1,886,271 - B158DRAFT_1792 0.40 +0.0
1,886,271 - B158DRAFT_1792 0.40 -0.5
1,886,271 - B158DRAFT_1792 0.40 +0.0
1,886,287 + B158DRAFT_1792 0.41 +0.1
1,886,363 + B158DRAFT_1792 0.49 -0.2
1,886,410 - B158DRAFT_1792 0.53 -0.4
1,886,416 + B158DRAFT_1792 0.54 -0.7
1,886,424 + B158DRAFT_1792 0.55 +0.4
1,886,424 + B158DRAFT_1792 0.55 -0.1
1,886,424 + B158DRAFT_1792 0.55 -0.1
1,886,424 + B158DRAFT_1792 0.55 +0.8
1,886,424 + B158DRAFT_1792 0.55 -0.0
1,886,424 + B158DRAFT_1792 0.55 -0.5
1,886,424 + B158DRAFT_1792 0.55 +0.3
1,886,424 + B158DRAFT_1792 0.55 +0.1
1,886,432 - B158DRAFT_1792 0.55 -0.0
1,886,432 - B158DRAFT_1792 0.55 +0.1
1,886,432 - B158DRAFT_1792 0.55 -0.8
1,886,432 - B158DRAFT_1792 0.55 -0.4
1,886,432 - B158DRAFT_1792 0.55 -0.0
1,886,432 - B158DRAFT_1792 0.55 -0.1
1,886,458 + B158DRAFT_1792 0.58 +0.1

Or see this region's nucleotide sequence