Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1727 and B158DRAFT_1728 are separated by 221 nucleotides B158DRAFT_1728 and B158DRAFT_1729 are separated by 102 nucleotides
B158DRAFT_1727: B158DRAFT_1727 - ribonucleoside-triphosphate reductase class III catalytic subunit (EC 1.17.4.2), at 1,800,769 to 1,802,808
_1727
B158DRAFT_1728: B158DRAFT_1728 - Uncharacterized conserved protein, at 1,803,030 to 1,803,401
_1728
B158DRAFT_1729: B158DRAFT_1729 - Glutamate decarboxylase and related PLP-dependent proteins, at 1,803,504 to 1,805,483
_1729
Position (kb)
1803
1804 Strain fitness (log2 ratio)
-1
0
1 at 1802.176 kb on - strand, within B158DRAFT_1727 at 1802.220 kb on - strand, within B158DRAFT_1727 at 1802.220 kb on - strand, within B158DRAFT_1727 at 1802.261 kb on + strand, within B158DRAFT_1727 at 1802.350 kb on - strand, within B158DRAFT_1727 at 1802.409 kb on - strand, within B158DRAFT_1727 at 1802.409 kb on - strand, within B158DRAFT_1727 at 1802.419 kb on - strand, within B158DRAFT_1727 at 1802.431 kb on + strand, within B158DRAFT_1727 at 1802.454 kb on - strand, within B158DRAFT_1727 at 1802.564 kb on + strand, within B158DRAFT_1727 at 1802.589 kb on - strand, within B158DRAFT_1727 at 1802.710 kb on - strand at 1802.710 kb on - strand at 1802.780 kb on + strand at 1802.948 kb on + strand at 1802.975 kb on + strand at 1802.990 kb on - strand at 1802.990 kb on - strand at 1803.073 kb on + strand, within B158DRAFT_1728 at 1803.081 kb on - strand, within B158DRAFT_1728 at 1803.081 kb on - strand, within B158DRAFT_1728 at 1803.106 kb on - strand, within B158DRAFT_1728 at 1803.226 kb on + strand, within B158DRAFT_1728 at 1803.228 kb on + strand, within B158DRAFT_1728 at 1803.228 kb on + strand, within B158DRAFT_1728 at 1803.228 kb on + strand, within B158DRAFT_1728 at 1803.228 kb on + strand, within B158DRAFT_1728 at 1803.228 kb on + strand, within B158DRAFT_1728 at 1803.236 kb on - strand, within B158DRAFT_1728 at 1803.236 kb on - strand, within B158DRAFT_1728 at 1803.236 kb on - strand, within B158DRAFT_1728 at 1803.236 kb on - strand, within B158DRAFT_1728 at 1803.236 kb on - strand, within B158DRAFT_1728 at 1803.236 kb on - strand, within B158DRAFT_1728 at 1803.236 kb on - strand, within B158DRAFT_1728 at 1803.240 kb on + strand, within B158DRAFT_1728 at 1803.271 kb on + strand, within B158DRAFT_1728 at 1803.273 kb on - strand, within B158DRAFT_1728 at 1803.279 kb on - strand, within B158DRAFT_1728 at 1803.279 kb on - strand, within B158DRAFT_1728 at 1803.279 kb on - strand, within B158DRAFT_1728 at 1803.279 kb on - strand, within B158DRAFT_1728 at 1803.279 kb on - strand, within B158DRAFT_1728 at 1803.279 kb on - strand, within B158DRAFT_1728 at 1803.304 kb on + strand, within B158DRAFT_1728 at 1803.320 kb on + strand, within B158DRAFT_1728 at 1803.467 kb on + strand at 1803.538 kb on - strand at 1803.572 kb on + strand at 1803.572 kb on + strand at 1803.572 kb on + strand at 1803.572 kb on + strand at 1803.580 kb on - strand at 1803.580 kb on - strand at 1803.664 kb on + strand at 1803.672 kb on - strand at 1803.715 kb on - strand, within B158DRAFT_1729 at 1803.778 kb on - strand, within B158DRAFT_1729 at 1803.820 kb on - strand, within B158DRAFT_1729 at 1803.820 kb on - strand, within B158DRAFT_1729 at 1803.896 kb on - strand, within B158DRAFT_1729 at 1803.973 kb on - strand, within B158DRAFT_1729 at 1803.973 kb on - strand, within B158DRAFT_1729 at 1804.075 kb on + strand, within B158DRAFT_1729 at 1804.075 kb on + strand, within B158DRAFT_1729 at 1804.083 kb on - strand, within B158DRAFT_1729 at 1804.142 kb on + strand, within B158DRAFT_1729 at 1804.207 kb on + strand, within B158DRAFT_1729 at 1804.215 kb on - strand, within B158DRAFT_1729 at 1804.215 kb on - strand, within B158DRAFT_1729 at 1804.243 kb on + strand, within B158DRAFT_1729 at 1804.282 kb on - strand, within B158DRAFT_1729 at 1804.291 kb on + strand, within B158DRAFT_1729 at 1804.317 kb on - strand, within B158DRAFT_1729 at 1804.317 kb on - strand, within B158DRAFT_1729 at 1804.357 kb on + strand, within B158DRAFT_1729
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 1,802,176 - B158DRAFT_1727 0.69 +0.1 1,802,220 - B158DRAFT_1727 0.71 -0.0 1,802,220 - B158DRAFT_1727 0.71 -0.5 1,802,261 + B158DRAFT_1727 0.73 +0.5 1,802,350 - B158DRAFT_1727 0.78 -0.2 1,802,409 - B158DRAFT_1727 0.80 -0.3 1,802,409 - B158DRAFT_1727 0.80 -0.5 1,802,419 - B158DRAFT_1727 0.81 +0.5 1,802,431 + B158DRAFT_1727 0.81 -0.8 1,802,454 - B158DRAFT_1727 0.83 -0.2 1,802,564 + B158DRAFT_1727 0.88 -0.9 1,802,589 - B158DRAFT_1727 0.89 +0.1 1,802,710 - -0.3 1,802,710 - -0.5 1,802,780 + -0.3 1,802,948 + -0.4 1,802,975 + +0.6 1,802,990 - -1.1 1,802,990 - -0.2 1,803,073 + B158DRAFT_1728 0.12 +0.4 1,803,081 - B158DRAFT_1728 0.14 -1.0 1,803,081 - B158DRAFT_1728 0.14 -0.5 1,803,106 - B158DRAFT_1728 0.20 -0.8 1,803,226 + B158DRAFT_1728 0.53 -0.3 1,803,228 + B158DRAFT_1728 0.53 -0.6 1,803,228 + B158DRAFT_1728 0.53 -0.2 1,803,228 + B158DRAFT_1728 0.53 -0.2 1,803,228 + B158DRAFT_1728 0.53 +0.1 1,803,228 + B158DRAFT_1728 0.53 -0.4 1,803,236 - B158DRAFT_1728 0.55 -1.0 1,803,236 - B158DRAFT_1728 0.55 +0.1 1,803,236 - B158DRAFT_1728 0.55 -0.2 1,803,236 - B158DRAFT_1728 0.55 -0.9 1,803,236 - B158DRAFT_1728 0.55 -0.1 1,803,236 - B158DRAFT_1728 0.55 +0.2 1,803,236 - B158DRAFT_1728 0.55 -0.5 1,803,240 + B158DRAFT_1728 0.56 -0.5 1,803,271 + B158DRAFT_1728 0.65 -0.5 1,803,273 - B158DRAFT_1728 0.65 +0.6 1,803,279 - B158DRAFT_1728 0.67 -0.8 1,803,279 - B158DRAFT_1728 0.67 -0.5 1,803,279 - B158DRAFT_1728 0.67 +0.4 1,803,279 - B158DRAFT_1728 0.67 -0.2 1,803,279 - B158DRAFT_1728 0.67 +0.8 1,803,279 - B158DRAFT_1728 0.67 -0.4 1,803,304 + B158DRAFT_1728 0.74 +0.1 1,803,320 + B158DRAFT_1728 0.78 -0.3 1,803,467 + -0.2 1,803,538 - +0.3 1,803,572 + +0.2 1,803,572 + +0.2 1,803,572 + -0.2 1,803,572 + +0.1 1,803,580 - +0.1 1,803,580 - +0.3 1,803,664 + -0.5 1,803,672 - -0.6 1,803,715 - B158DRAFT_1729 0.11 -0.5 1,803,778 - B158DRAFT_1729 0.14 +0.3 1,803,820 - B158DRAFT_1729 0.16 -0.3 1,803,820 - B158DRAFT_1729 0.16 -0.9 1,803,896 - B158DRAFT_1729 0.20 +0.1 1,803,973 - B158DRAFT_1729 0.24 +0.0 1,803,973 - B158DRAFT_1729 0.24 -0.1 1,804,075 + B158DRAFT_1729 0.29 -0.4 1,804,075 + B158DRAFT_1729 0.29 +0.6 1,804,083 - B158DRAFT_1729 0.29 +0.1 1,804,142 + B158DRAFT_1729 0.32 -0.2 1,804,207 + B158DRAFT_1729 0.36 -0.0 1,804,215 - B158DRAFT_1729 0.36 -0.5 1,804,215 - B158DRAFT_1729 0.36 +0.1 1,804,243 + B158DRAFT_1729 0.37 -0.3 1,804,282 - B158DRAFT_1729 0.39 -0.2 1,804,291 + B158DRAFT_1729 0.40 +0.1 1,804,317 - B158DRAFT_1729 0.41 +0.2 1,804,317 - B158DRAFT_1729 0.41 -0.0 1,804,357 + B158DRAFT_1729 0.43 +0.2
Or see this region's nucleotide sequence