Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1458

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1456 and B158DRAFT_1457 are separated by 1 nucleotidesB158DRAFT_1457 and B158DRAFT_1458 are separated by 198 nucleotidesB158DRAFT_1458 and B158DRAFT_1459 are separated by 59 nucleotides B158DRAFT_1456: B158DRAFT_1456 - RNA methyltransferase, TrmH family, group 1, at 1,510,679 to 1,511,500 _1456 B158DRAFT_1457: B158DRAFT_1457 - serine O-acetyltransferase, at 1,511,502 to 1,512,296 _1457 B158DRAFT_1458: B158DRAFT_1458 - transcriptional regulator, BadM/Rrf2 family, at 1,512,495 to 1,512,962 _1458 B158DRAFT_1459: B158DRAFT_1459 - cysteine desulfurase IscS, at 1,513,022 to 1,514,236 _1459 Position (kb) 1512 1513Strain fitness (log2 ratio) -3 -2 -1 0 1at 1512.042 kb on + strand, within B158DRAFT_1457at 1512.050 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.163 kb on + strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.171 kb on - strand, within B158DRAFT_1457at 1512.243 kb on - strandat 1512.248 kb on - strandat 1512.249 kb on + strandat 1512.258 kb on - strandat 1512.258 kb on - strandat 1512.258 kb on - strandat 1512.400 kb on + strandat 1512.422 kb on + strandat 1512.430 kb on - strandat 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458at 1512.546 kb on + strand, within B158DRAFT_1458

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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1,512,042 + B158DRAFT_1457 0.68 -1.4
1,512,050 + B158DRAFT_1457 0.69 -1.3
1,512,163 + B158DRAFT_1457 0.83 -1.9
1,512,163 + B158DRAFT_1457 0.83 -1.7
1,512,163 + B158DRAFT_1457 0.83 -1.7
1,512,163 + B158DRAFT_1457 0.83 -0.2
1,512,163 + B158DRAFT_1457 0.83 -0.3
1,512,163 + B158DRAFT_1457 0.83 -0.3
1,512,171 - B158DRAFT_1457 0.84 +0.2
1,512,171 - B158DRAFT_1457 0.84 -0.3
1,512,171 - B158DRAFT_1457 0.84 +0.2
1,512,171 - B158DRAFT_1457 0.84 -1.0
1,512,171 - B158DRAFT_1457 0.84 +0.4
1,512,171 - B158DRAFT_1457 0.84 +0.3
1,512,171 - B158DRAFT_1457 0.84 +0.1
1,512,243 - -0.2
1,512,248 - -0.1
1,512,249 + +0.3
1,512,258 - -0.0
1,512,258 - -0.2
1,512,258 - -0.0
1,512,400 + +0.4
1,512,422 + -0.0
1,512,430 - -0.1
1,512,546 + B158DRAFT_1458 0.11 -1.9
1,512,546 + B158DRAFT_1458 0.11 -3.3
1,512,546 + B158DRAFT_1458 0.11 -2.2
1,512,546 + B158DRAFT_1458 0.11 -2.6
1,512,546 + B158DRAFT_1458 0.11 -2.1

Or see this region's nucleotide sequence