Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0983

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0982 and B158DRAFT_0983 are separated by 135 nucleotidesB158DRAFT_0983 and B158DRAFT_0984 are separated by 127 nucleotides B158DRAFT_0982: B158DRAFT_0982 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 1,014,500 to 1,016,569 _0982 B158DRAFT_0983: B158DRAFT_0983 - hypothetical protein, at 1,016,705 to 1,018,477 _0983 B158DRAFT_0984: B158DRAFT_0984 - lysine-2,3-aminomutase-related protein, at 1,018,605 to 1,019,636 _0984 Position (kb) 1016 1017 1018 1019Strain fitness (log2 ratio) -1 0 1 2at 1015.724 kb on + strand, within B158DRAFT_0982at 1015.932 kb on + strand, within B158DRAFT_0982at 1015.932 kb on + strand, within B158DRAFT_0982at 1015.932 kb on + strand, within B158DRAFT_0982at 1015.932 kb on + strand, within B158DRAFT_0982at 1016.000 kb on + strand, within B158DRAFT_0982at 1016.128 kb on + strand, within B158DRAFT_0982at 1016.128 kb on + strand, within B158DRAFT_0982at 1016.128 kb on + strand, within B158DRAFT_0982at 1016.136 kb on - strand, within B158DRAFT_0982at 1016.136 kb on - strand, within B158DRAFT_0982at 1016.136 kb on - strand, within B158DRAFT_0982at 1016.242 kb on - strand, within B158DRAFT_0982at 1016.256 kb on - strand, within B158DRAFT_0982at 1016.256 kb on - strand, within B158DRAFT_0982at 1016.256 kb on - strand, within B158DRAFT_0982at 1016.292 kb on - strand, within B158DRAFT_0982at 1016.424 kb on + strandat 1016.424 kb on + strandat 1016.424 kb on + strandat 1016.424 kb on + strandat 1016.429 kb on + strandat 1016.432 kb on - strandat 1016.432 kb on - strandat 1016.432 kb on - strandat 1016.432 kb on - strandat 1016.432 kb on - strandat 1016.432 kb on - strandat 1016.432 kb on - strandat 1016.434 kb on + strandat 1016.441 kb on + strandat 1016.441 kb on + strandat 1016.517 kb on - strandat 1016.523 kb on + strandat 1016.591 kb on - strandat 1016.594 kb on + strandat 1016.602 kb on - strandat 1016.602 kb on - strandat 1016.772 kb on + strandat 1016.772 kb on + strandat 1016.772 kb on + strandat 1016.772 kb on + strandat 1016.772 kb on + strandat 1016.772 kb on + strandat 1016.772 kb on + strandat 1016.780 kb on - strandat 1016.780 kb on - strandat 1016.780 kb on - strandat 1016.782 kb on - strandat 1016.812 kb on + strandat 1016.812 kb on + strandat 1016.815 kb on - strandat 1016.833 kb on - strandat 1016.889 kb on - strand, within B158DRAFT_0983at 1016.923 kb on + strand, within B158DRAFT_0983at 1016.924 kb on + strand, within B158DRAFT_0983at 1016.924 kb on + strand, within B158DRAFT_0983at 1016.931 kb on - strand, within B158DRAFT_0983at 1016.932 kb on - strand, within B158DRAFT_0983at 1016.932 kb on - strand, within B158DRAFT_0983at 1016.943 kb on + strand, within B158DRAFT_0983at 1016.965 kb on + strand, within B158DRAFT_0983at 1016.970 kb on + strand, within B158DRAFT_0983at 1016.970 kb on + strand, within B158DRAFT_0983at 1016.973 kb on - strand, within B158DRAFT_0983at 1016.978 kb on + strand, within B158DRAFT_0983at 1016.986 kb on + strand, within B158DRAFT_0983at 1016.989 kb on - strand, within B158DRAFT_0983at 1016.994 kb on - strand, within B158DRAFT_0983at 1016.994 kb on - strand, within B158DRAFT_0983at 1016.994 kb on - strand, within B158DRAFT_0983at 1017.013 kb on + strand, within B158DRAFT_0983at 1017.018 kb on + strand, within B158DRAFT_0983at 1017.019 kb on + strand, within B158DRAFT_0983at 1017.019 kb on + strand, within B158DRAFT_0983at 1017.019 kb on + strand, within B158DRAFT_0983at 1017.019 kb on + strand, within B158DRAFT_0983at 1017.026 kb on + strand, within B158DRAFT_0983at 1017.026 kb on - strand, within B158DRAFT_0983at 1017.027 kb on - strand, within B158DRAFT_0983at 1017.027 kb on - strand, within B158DRAFT_0983at 1017.027 kb on - strand, within B158DRAFT_0983at 1017.027 kb on - strand, within B158DRAFT_0983at 1017.032 kb on - strand, within B158DRAFT_0983at 1017.063 kb on + strand, within B158DRAFT_0983at 1017.150 kb on + strand, within B158DRAFT_0983at 1017.150 kb on + strand, within B158DRAFT_0983at 1017.150 kb on + strand, within B158DRAFT_0983at 1017.150 kb on + strand, within B158DRAFT_0983at 1017.158 kb on - strand, within B158DRAFT_0983at 1017.158 kb on - strand, within B158DRAFT_0983at 1017.158 kb on - strand, within B158DRAFT_0983at 1017.158 kb on - strand, within B158DRAFT_0983at 1017.158 kb on - strand, within B158DRAFT_0983at 1017.231 kb on - strand, within B158DRAFT_0983at 1017.262 kb on + strand, within B158DRAFT_0983at 1017.262 kb on + strand, within B158DRAFT_0983at 1017.296 kb on - strand, within B158DRAFT_0983at 1017.331 kb on + strand, within B158DRAFT_0983at 1017.357 kb on + strand, within B158DRAFT_0983at 1017.365 kb on - strand, within B158DRAFT_0983at 1017.390 kb on + strand, within B158DRAFT_0983at 1017.412 kb on + strand, within B158DRAFT_0983at 1017.412 kb on + strand, within B158DRAFT_0983at 1017.422 kb on - strand, within B158DRAFT_0983at 1017.462 kb on + strand, within B158DRAFT_0983at 1017.636 kb on + strand, within B158DRAFT_0983at 1017.641 kb on + strand, within B158DRAFT_0983at 1017.642 kb on - strand, within B158DRAFT_0983at 1017.646 kb on + strand, within B158DRAFT_0983at 1017.649 kb on - strand, within B158DRAFT_0983at 1017.747 kb on - strand, within B158DRAFT_0983at 1017.747 kb on - strand, within B158DRAFT_0983at 1017.749 kb on - strand, within B158DRAFT_0983at 1017.749 kb on - strand, within B158DRAFT_0983at 1017.766 kb on + strand, within B158DRAFT_0983at 1017.774 kb on - strand, within B158DRAFT_0983at 1017.795 kb on - strand, within B158DRAFT_0983at 1017.936 kb on + strand, within B158DRAFT_0983at 1018.034 kb on + strand, within B158DRAFT_0983at 1018.042 kb on - strand, within B158DRAFT_0983at 1018.071 kb on - strand, within B158DRAFT_0983at 1018.098 kb on - strand, within B158DRAFT_0983at 1018.109 kb on - strand, within B158DRAFT_0983at 1018.148 kb on + strand, within B158DRAFT_0983at 1018.155 kb on + strand, within B158DRAFT_0983at 1018.155 kb on + strand, within B158DRAFT_0983at 1018.155 kb on + strand, within B158DRAFT_0983at 1018.163 kb on - strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.250 kb on + strand, within B158DRAFT_0983at 1018.255 kb on + strand, within B158DRAFT_0983at 1018.292 kb on + strand, within B158DRAFT_0983at 1018.306 kb on + strandat 1018.352 kb on - strandat 1018.352 kb on - strandat 1018.379 kb on + strandat 1018.411 kb on - strandat 1018.466 kb on + strandat 1018.467 kb on + strandat 1018.475 kb on - strandat 1018.485 kb on + strandat 1018.486 kb on + strandat 1018.491 kb on + strandat 1018.494 kb on - strandat 1018.521 kb on + strandat 1018.788 kb on + strand, within B158DRAFT_0984at 1018.881 kb on + strand, within B158DRAFT_0984at 1018.897 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.956 kb on + strand, within B158DRAFT_0984at 1018.964 kb on - strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.977 kb on + strand, within B158DRAFT_0984at 1018.982 kb on + strand, within B158DRAFT_0984at 1018.985 kb on - strand, within B158DRAFT_0984at 1018.985 kb on - strand, within B158DRAFT_0984at 1018.990 kb on - strand, within B158DRAFT_0984at 1019.001 kb on + strand, within B158DRAFT_0984at 1019.004 kb on - strand, within B158DRAFT_0984at 1019.006 kb on + strand, within B158DRAFT_0984at 1019.009 kb on - strand, within B158DRAFT_0984at 1019.020 kb on + strand, within B158DRAFT_0984at 1019.069 kb on + strand, within B158DRAFT_0984at 1019.071 kb on + strand, within B158DRAFT_0984at 1019.127 kb on - strand, within B158DRAFT_0984at 1019.217 kb on - strand, within B158DRAFT_0984at 1019.393 kb on - strand, within B158DRAFT_0984

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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1,015,724 + B158DRAFT_0982 0.59 +0.1
1,015,932 + B158DRAFT_0982 0.69 +0.7
1,015,932 + B158DRAFT_0982 0.69 +0.1
1,015,932 + B158DRAFT_0982 0.69 +0.5
1,015,932 + B158DRAFT_0982 0.69 +0.7
1,016,000 + B158DRAFT_0982 0.72 +0.1
1,016,128 + B158DRAFT_0982 0.79 +0.8
1,016,128 + B158DRAFT_0982 0.79 +0.2
1,016,128 + B158DRAFT_0982 0.79 +1.0
1,016,136 - B158DRAFT_0982 0.79 +1.4
1,016,136 - B158DRAFT_0982 0.79 +0.3
1,016,136 - B158DRAFT_0982 0.79 +0.6
1,016,242 - B158DRAFT_0982 0.84 +0.8
1,016,256 - B158DRAFT_0982 0.85 +0.2
1,016,256 - B158DRAFT_0982 0.85 +0.6
1,016,256 - B158DRAFT_0982 0.85 +0.3
1,016,292 - B158DRAFT_0982 0.87 +0.5
1,016,424 + +0.2
1,016,424 + +0.6
1,016,424 + +0.9
1,016,424 + +0.7
1,016,429 + +0.5
1,016,432 - +0.4
1,016,432 - +0.3
1,016,432 - +0.8
1,016,432 - +0.3
1,016,432 - +0.4
1,016,432 - +0.3
1,016,432 - +0.5
1,016,434 + +0.4
1,016,441 + +0.8
1,016,441 + +0.4
1,016,517 - +0.0
1,016,523 + +0.2
1,016,591 - +0.6
1,016,594 + +0.2
1,016,602 - +1.1
1,016,602 - +0.6
1,016,772 + -0.2
1,016,772 + -0.3
1,016,772 + -0.7
1,016,772 + -0.0
1,016,772 + -0.0
1,016,772 + -0.6
1,016,772 + +0.6
1,016,780 - +0.2
1,016,780 - -0.1
1,016,780 - -0.1
1,016,782 - +0.0
1,016,812 + +0.2
1,016,812 + -0.7
1,016,815 - -0.2
1,016,833 - -0.2
1,016,889 - B158DRAFT_0983 0.10 +0.0
1,016,923 + B158DRAFT_0983 0.12 +0.3
1,016,924 + B158DRAFT_0983 0.12 -0.2
1,016,924 + B158DRAFT_0983 0.12 +0.0
1,016,931 - B158DRAFT_0983 0.13 -0.4
1,016,932 - B158DRAFT_0983 0.13 +0.5
1,016,932 - B158DRAFT_0983 0.13 +0.2
1,016,943 + B158DRAFT_0983 0.13 -0.4
1,016,965 + B158DRAFT_0983 0.15 -0.1
1,016,970 + B158DRAFT_0983 0.15 -0.3
1,016,970 + B158DRAFT_0983 0.15 +0.4
1,016,973 - B158DRAFT_0983 0.15 -0.4
1,016,978 + B158DRAFT_0983 0.15 +0.3
1,016,986 + B158DRAFT_0983 0.16 -0.1
1,016,989 - B158DRAFT_0983 0.16 -0.8
1,016,994 - B158DRAFT_0983 0.16 +0.2
1,016,994 - B158DRAFT_0983 0.16 -0.6
1,016,994 - B158DRAFT_0983 0.16 -0.1
1,017,013 + B158DRAFT_0983 0.17 +0.2
1,017,018 + B158DRAFT_0983 0.18 -0.5
1,017,019 + B158DRAFT_0983 0.18 +0.4
1,017,019 + B158DRAFT_0983 0.18 +0.4
1,017,019 + B158DRAFT_0983 0.18 +0.2
1,017,019 + B158DRAFT_0983 0.18 +0.2
1,017,026 + B158DRAFT_0983 0.18 +2.0
1,017,026 - B158DRAFT_0983 0.18 -0.6
1,017,027 - B158DRAFT_0983 0.18 -0.1
1,017,027 - B158DRAFT_0983 0.18 +0.4
1,017,027 - B158DRAFT_0983 0.18 -0.0
1,017,027 - B158DRAFT_0983 0.18 -0.1
1,017,032 - B158DRAFT_0983 0.18 -1.0
1,017,063 + B158DRAFT_0983 0.20 -0.1
1,017,150 + B158DRAFT_0983 0.25 -0.5
1,017,150 + B158DRAFT_0983 0.25 +0.7
1,017,150 + B158DRAFT_0983 0.25 -0.1
1,017,150 + B158DRAFT_0983 0.25 +0.1
1,017,158 - B158DRAFT_0983 0.26 +0.4
1,017,158 - B158DRAFT_0983 0.26 -0.9
1,017,158 - B158DRAFT_0983 0.26 -0.2
1,017,158 - B158DRAFT_0983 0.26 +0.8
1,017,158 - B158DRAFT_0983 0.26 -0.3
1,017,231 - B158DRAFT_0983 0.30 +0.2
1,017,262 + B158DRAFT_0983 0.31 +0.4
1,017,262 + B158DRAFT_0983 0.31 -0.3
1,017,296 - B158DRAFT_0983 0.33 -0.3
1,017,331 + B158DRAFT_0983 0.35 -0.5
1,017,357 + B158DRAFT_0983 0.37 +0.3
1,017,365 - B158DRAFT_0983 0.37 +0.4
1,017,390 + B158DRAFT_0983 0.39 -0.2
1,017,412 + B158DRAFT_0983 0.40 -0.7
1,017,412 + B158DRAFT_0983 0.40 +0.1
1,017,422 - B158DRAFT_0983 0.40 +0.2
1,017,462 + B158DRAFT_0983 0.43 +0.3
1,017,636 + B158DRAFT_0983 0.53 +0.2
1,017,641 + B158DRAFT_0983 0.53 +0.1
1,017,642 - B158DRAFT_0983 0.53 -0.6
1,017,646 + B158DRAFT_0983 0.53 -0.1
1,017,649 - B158DRAFT_0983 0.53 +0.0
1,017,747 - B158DRAFT_0983 0.59 +0.3
1,017,747 - B158DRAFT_0983 0.59 +0.1
1,017,749 - B158DRAFT_0983 0.59 +0.5
1,017,749 - B158DRAFT_0983 0.59 -0.2
1,017,766 + B158DRAFT_0983 0.60 +0.3
1,017,774 - B158DRAFT_0983 0.60 -0.3
1,017,795 - B158DRAFT_0983 0.61 +1.2
1,017,936 + B158DRAFT_0983 0.69 -0.4
1,018,034 + B158DRAFT_0983 0.75 +1.7
1,018,042 - B158DRAFT_0983 0.75 +0.5
1,018,071 - B158DRAFT_0983 0.77 +0.5
1,018,098 - B158DRAFT_0983 0.79 -0.3
1,018,109 - B158DRAFT_0983 0.79 +0.1
1,018,148 + B158DRAFT_0983 0.81 -0.8
1,018,155 + B158DRAFT_0983 0.82 -0.5
1,018,155 + B158DRAFT_0983 0.82 -0.0
1,018,155 + B158DRAFT_0983 0.82 -0.8
1,018,163 - B158DRAFT_0983 0.82 -0.2
1,018,250 + B158DRAFT_0983 0.87 -0.5
1,018,250 + B158DRAFT_0983 0.87 +0.3
1,018,250 + B158DRAFT_0983 0.87 -0.4
1,018,250 + B158DRAFT_0983 0.87 +0.3
1,018,255 + B158DRAFT_0983 0.87 +0.3
1,018,292 + B158DRAFT_0983 0.90 -0.1
1,018,306 + -0.2
1,018,352 - +0.1
1,018,352 - -0.3
1,018,379 + +0.2
1,018,411 - +0.2
1,018,466 + -1.5
1,018,467 + -0.3
1,018,475 - -0.6
1,018,485 + -0.2
1,018,486 + +0.0
1,018,491 + -0.5
1,018,494 - -0.1
1,018,521 + -0.1
1,018,788 + B158DRAFT_0984 0.18 +0.1
1,018,881 + B158DRAFT_0984 0.27 -0.3
1,018,897 + B158DRAFT_0984 0.28 -0.6
1,018,956 + B158DRAFT_0984 0.34 -0.1
1,018,956 + B158DRAFT_0984 0.34 -0.4
1,018,956 + B158DRAFT_0984 0.34 -0.1
1,018,964 - B158DRAFT_0984 0.35 -0.6
1,018,977 + B158DRAFT_0984 0.36 +0.3
1,018,977 + B158DRAFT_0984 0.36 +0.2
1,018,977 + B158DRAFT_0984 0.36 -0.3
1,018,977 + B158DRAFT_0984 0.36 -0.6
1,018,982 + B158DRAFT_0984 0.37 -0.5
1,018,985 - B158DRAFT_0984 0.37 -0.1
1,018,985 - B158DRAFT_0984 0.37 +0.0
1,018,990 - B158DRAFT_0984 0.37 -0.7
1,019,001 + B158DRAFT_0984 0.38 -0.2
1,019,004 - B158DRAFT_0984 0.39 -0.3
1,019,006 + B158DRAFT_0984 0.39 -0.2
1,019,009 - B158DRAFT_0984 0.39 +0.0
1,019,020 + B158DRAFT_0984 0.40 +0.1
1,019,069 + B158DRAFT_0984 0.45 -0.6
1,019,071 + B158DRAFT_0984 0.45 -0.5
1,019,127 - B158DRAFT_0984 0.51 +0.4
1,019,217 - B158DRAFT_0984 0.59 +0.1
1,019,393 - B158DRAFT_0984 0.76 -0.8

Or see this region's nucleotide sequence