Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0853

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0851 and B158DRAFT_0853 are separated by 499 nucleotidesB158DRAFT_0853 and B158DRAFT_0854 are separated by 116 nucleotides B158DRAFT_0851: B158DRAFT_0851 - aspartate kinase (EC 2.7.2.4), at 867,485 to 868,867 _0851 B158DRAFT_0853: B158DRAFT_0853 - IscR-regulated protein YhgI, at 869,367 to 869,945 _0853 B158DRAFT_0854: B158DRAFT_0854 - Zinc carboxypeptidase., at 870,062 to 872,596 _0854 Position (kb) 869 870Strain fitness (log2 ratio) -2 -1 0 1at 868.908 kb on - strandat 868.911 kb on - strandat 869.087 kb on + strandat 869.089 kb on + strandat 869.089 kb on + strandat 869.089 kb on + strandat 869.089 kb on + strandat 869.089 kb on + strandat 869.089 kb on + strandat 869.089 kb on + strandat 869.097 kb on - strandat 869.097 kb on - strandat 869.097 kb on - strandat 869.097 kb on - strandat 869.097 kb on - strandat 869.097 kb on - strandat 869.098 kb on + strandat 869.164 kb on + strandat 869.188 kb on + strandat 869.193 kb on + strandat 869.201 kb on - strandat 869.226 kb on - strandat 869.239 kb on + strandat 869.239 kb on + strandat 870.107 kb on - strandat 870.117 kb on - strandat 870.126 kb on - strandat 870.248 kb on - strandat 870.282 kb on + strandat 870.290 kb on - strandat 870.320 kb on + strand, within B158DRAFT_0854at 870.328 kb on - strand, within B158DRAFT_0854at 870.328 kb on - strand, within B158DRAFT_0854at 870.328 kb on - strand, within B158DRAFT_0854at 870.332 kb on + strand, within B158DRAFT_0854at 870.340 kb on - strand, within B158DRAFT_0854at 870.352 kb on + strand, within B158DRAFT_0854at 870.352 kb on - strand, within B158DRAFT_0854at 870.392 kb on - strand, within B158DRAFT_0854at 870.428 kb on + strand, within B158DRAFT_0854at 870.459 kb on + strand, within B158DRAFT_0854at 870.459 kb on + strand, within B158DRAFT_0854at 870.459 kb on + strand, within B158DRAFT_0854at 870.459 kb on + strand, within B158DRAFT_0854at 870.459 kb on + strand, within B158DRAFT_0854at 870.467 kb on - strand, within B158DRAFT_0854at 870.467 kb on - strand, within B158DRAFT_0854at 870.489 kb on + strand, within B158DRAFT_0854at 870.521 kb on - strand, within B158DRAFT_0854at 870.536 kb on - strand, within B158DRAFT_0854at 870.574 kb on + strand, within B158DRAFT_0854at 870.627 kb on - strand, within B158DRAFT_0854at 870.627 kb on - strand, within B158DRAFT_0854at 870.627 kb on - strand, within B158DRAFT_0854at 870.723 kb on + strand, within B158DRAFT_0854at 870.765 kb on - strand, within B158DRAFT_0854at 870.824 kb on + strand, within B158DRAFT_0854at 870.862 kb on - strand, within B158DRAFT_0854at 870.862 kb on - strand, within B158DRAFT_0854at 870.862 kb on - strand, within B158DRAFT_0854at 870.863 kb on + strand, within B158DRAFT_0854at 870.863 kb on + strand, within B158DRAFT_0854at 870.871 kb on - strand, within B158DRAFT_0854at 870.871 kb on - strand, within B158DRAFT_0854at 870.871 kb on - strand, within B158DRAFT_0854at 870.882 kb on + strand, within B158DRAFT_0854at 870.883 kb on - strand, within B158DRAFT_0854at 870.883 kb on - strand, within B158DRAFT_0854at 870.941 kb on - strand, within B158DRAFT_0854

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
remove
868,908 - -1.2
868,911 - +0.2
869,087 + -0.3
869,089 + +0.0
869,089 + +0.1
869,089 + -0.3
869,089 + -1.1
869,089 + +0.2
869,089 + +0.3
869,089 + -0.1
869,097 - +0.5
869,097 - -0.2
869,097 - +0.7
869,097 - -0.0
869,097 - +0.4
869,097 - -0.5
869,098 + -0.1
869,164 + -0.7
869,188 + -0.4
869,193 + +0.1
869,201 - +0.0
869,226 - +0.4
869,239 + +0.0
869,239 + -0.4
870,107 - -0.1
870,117 - -0.1
870,126 - +0.1
870,248 - +0.7
870,282 + +0.4
870,290 - +0.3
870,320 + B158DRAFT_0854 0.10 -0.3
870,328 - B158DRAFT_0854 0.10 +0.5
870,328 - B158DRAFT_0854 0.10 +0.4
870,328 - B158DRAFT_0854 0.10 +1.0
870,332 + B158DRAFT_0854 0.11 +0.4
870,340 - B158DRAFT_0854 0.11 -0.2
870,352 + B158DRAFT_0854 0.11 -0.4
870,352 - B158DRAFT_0854 0.11 +0.2
870,392 - B158DRAFT_0854 0.13 -1.0
870,428 + B158DRAFT_0854 0.14 +0.2
870,459 + B158DRAFT_0854 0.16 +0.2
870,459 + B158DRAFT_0854 0.16 -1.8
870,459 + B158DRAFT_0854 0.16 +0.1
870,459 + B158DRAFT_0854 0.16 -0.2
870,459 + B158DRAFT_0854 0.16 +0.5
870,467 - B158DRAFT_0854 0.16 -0.2
870,467 - B158DRAFT_0854 0.16 +0.0
870,489 + B158DRAFT_0854 0.17 -0.2
870,521 - B158DRAFT_0854 0.18 -0.1
870,536 - B158DRAFT_0854 0.19 +0.3
870,574 + B158DRAFT_0854 0.20 -0.4
870,627 - B158DRAFT_0854 0.22 -0.4
870,627 - B158DRAFT_0854 0.22 +0.1
870,627 - B158DRAFT_0854 0.22 +0.7
870,723 + B158DRAFT_0854 0.26 +0.3
870,765 - B158DRAFT_0854 0.28 +0.0
870,824 + B158DRAFT_0854 0.30 +0.5
870,862 - B158DRAFT_0854 0.32 +0.3
870,862 - B158DRAFT_0854 0.32 +0.5
870,862 - B158DRAFT_0854 0.32 +0.6
870,863 + B158DRAFT_0854 0.32 -0.1
870,863 + B158DRAFT_0854 0.32 +0.4
870,871 - B158DRAFT_0854 0.32 +0.3
870,871 - B158DRAFT_0854 0.32 +0.4
870,871 - B158DRAFT_0854 0.32 -0.2
870,882 + B158DRAFT_0854 0.32 +0.4
870,883 - B158DRAFT_0854 0.32 +0.7
870,883 - B158DRAFT_0854 0.32 +0.0
870,941 - B158DRAFT_0854 0.35 +0.2

Or see this region's nucleotide sequence