Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0762 and B158DRAFT_0763 are separated by 96 nucleotides B158DRAFT_0763 and B158DRAFT_0764 are separated by 12 nucleotides
B158DRAFT_0762: B158DRAFT_0762 - type IV pilus secretin (or competence protein) PilQ, at 768,016 to 770,106
_0762
B158DRAFT_0763: B158DRAFT_0763 - shikimate kinase (EC 2.7.1.71), at 770,203 to 770,727
_0763
B158DRAFT_0764: B158DRAFT_0764 - 3-dehydroquinate synthase (EC 4.2.3.4), at 770,740 to 771,822
_0764
Position (kb) 770
771 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 769.225 kb on + strand, within B158DRAFT_0762 at 769.225 kb on + strand, within B158DRAFT_0762 at 769.233 kb on + strand, within B158DRAFT_0762 at 769.260 kb on + strand, within B158DRAFT_0762 at 769.289 kb on - strand, within B158DRAFT_0762 at 769.344 kb on + strand, within B158DRAFT_0762 at 769.374 kb on + strand, within B158DRAFT_0762 at 769.382 kb on - strand, within B158DRAFT_0762 at 769.474 kb on + strand, within B158DRAFT_0762 at 769.554 kb on - strand, within B158DRAFT_0762 at 769.600 kb on + strand, within B158DRAFT_0762 at 769.637 kb on + strand, within B158DRAFT_0762 at 769.637 kb on + strand, within B158DRAFT_0762 at 769.704 kb on + strand, within B158DRAFT_0762 at 769.789 kb on + strand, within B158DRAFT_0762 at 769.827 kb on + strand, within B158DRAFT_0762 at 769.996 kb on + strand at 770.002 kb on - strand at 770.003 kb on - strand at 770.143 kb on - strand at 770.439 kb on - strand, within B158DRAFT_0763 at 770.834 kb on + strand at 770.851 kb on + strand, within B158DRAFT_0764 at 770.888 kb on + strand, within B158DRAFT_0764 at 770.888 kb on + strand, within B158DRAFT_0764 at 770.888 kb on + strand, within B158DRAFT_0764 at 770.888 kb on + strand, within B158DRAFT_0764 at 770.891 kb on - strand, within B158DRAFT_0764 at 770.896 kb on - strand, within B158DRAFT_0764 at 770.896 kb on - strand, within B158DRAFT_0764 at 770.898 kb on + strand, within B158DRAFT_0764 at 770.898 kb on + strand, within B158DRAFT_0764 at 770.898 kb on + strand, within B158DRAFT_0764 at 770.898 kb on + strand, within B158DRAFT_0764 at 770.906 kb on - strand, within B158DRAFT_0764 at 770.906 kb on - strand, within B158DRAFT_0764 at 770.929 kb on - strand, within B158DRAFT_0764 at 770.948 kb on + strand, within B158DRAFT_0764 at 770.951 kb on - strand, within B158DRAFT_0764 at 770.953 kb on + strand, within B158DRAFT_0764 at 770.966 kb on + strand, within B158DRAFT_0764 at 770.974 kb on - strand, within B158DRAFT_0764 at 770.978 kb on + strand, within B158DRAFT_0764 at 771.018 kb on - strand, within B158DRAFT_0764 at 771.132 kb on + strand, within B158DRAFT_0764 at 771.138 kb on + strand, within B158DRAFT_0764 at 771.140 kb on - strand, within B158DRAFT_0764 at 771.220 kb on - strand, within B158DRAFT_0764 at 771.250 kb on - strand, within B158DRAFT_0764 at 771.291 kb on + strand, within B158DRAFT_0764 at 771.291 kb on + strand, within B158DRAFT_0764 at 771.472 kb on + strand, within B158DRAFT_0764 at 771.671 kb on - strand, within B158DRAFT_0764 at 771.674 kb on - strand, within B158DRAFT_0764 at 771.676 kb on + strand, within B158DRAFT_0764 at 771.684 kb on - strand, within B158DRAFT_0764
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 769,225 + B158DRAFT_0762 0.58 -0.7 769,225 + B158DRAFT_0762 0.58 +0.6 769,233 + B158DRAFT_0762 0.58 +1.0 769,260 + B158DRAFT_0762 0.59 +0.5 769,289 - B158DRAFT_0762 0.61 -1.5 769,344 + B158DRAFT_0762 0.64 +0.7 769,374 + B158DRAFT_0762 0.65 +0.8 769,382 - B158DRAFT_0762 0.65 -0.2 769,474 + B158DRAFT_0762 0.70 -0.2 769,554 - B158DRAFT_0762 0.74 +1.1 769,600 + B158DRAFT_0762 0.76 +0.6 769,637 + B158DRAFT_0762 0.78 +0.6 769,637 + B158DRAFT_0762 0.78 +2.1 769,704 + B158DRAFT_0762 0.81 +0.3 769,789 + B158DRAFT_0762 0.85 +0.2 769,827 + B158DRAFT_0762 0.87 +0.1 769,996 + +0.4 770,002 - +0.5 770,003 - +0.5 770,143 - -1.9 770,439 - B158DRAFT_0763 0.45 -1.5 770,834 + -0.6 770,851 + B158DRAFT_0764 0.10 -1.1 770,888 + B158DRAFT_0764 0.14 -0.5 770,888 + B158DRAFT_0764 0.14 -1.1 770,888 + B158DRAFT_0764 0.14 -2.5 770,888 + B158DRAFT_0764 0.14 -2.4 770,891 - B158DRAFT_0764 0.14 -0.8 770,896 - B158DRAFT_0764 0.14 -0.4 770,896 - B158DRAFT_0764 0.14 -1.1 770,898 + B158DRAFT_0764 0.15 -1.5 770,898 + B158DRAFT_0764 0.15 -1.2 770,898 + B158DRAFT_0764 0.15 -2.8 770,898 + B158DRAFT_0764 0.15 -1.3 770,906 - B158DRAFT_0764 0.15 -0.9 770,906 - B158DRAFT_0764 0.15 -1.2 770,929 - B158DRAFT_0764 0.17 -0.9 770,948 + B158DRAFT_0764 0.19 -0.8 770,951 - B158DRAFT_0764 0.19 -0.9 770,953 + B158DRAFT_0764 0.20 -1.2 770,966 + B158DRAFT_0764 0.21 -2.7 770,974 - B158DRAFT_0764 0.22 -3.0 770,978 + B158DRAFT_0764 0.22 -1.5 771,018 - B158DRAFT_0764 0.26 -1.8 771,132 + B158DRAFT_0764 0.36 -2.6 771,138 + B158DRAFT_0764 0.37 -0.9 771,140 - B158DRAFT_0764 0.37 -2.1 771,220 - B158DRAFT_0764 0.44 -0.7 771,250 - B158DRAFT_0764 0.47 -1.1 771,291 + B158DRAFT_0764 0.51 -2.3 771,291 + B158DRAFT_0764 0.51 -1.6 771,472 + B158DRAFT_0764 0.68 -1.0 771,671 - B158DRAFT_0764 0.86 -2.4 771,674 - B158DRAFT_0764 0.86 -1.1 771,676 + B158DRAFT_0764 0.86 -0.7 771,684 - B158DRAFT_0764 0.87 +0.5
Or see this region's nucleotide sequence