Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0404

Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0402 and B158DRAFT_0403 are separated by 199 nucleotidesB158DRAFT_0403 and B158DRAFT_0404 are separated by 9 nucleotidesB158DRAFT_0404 and B158DRAFT_0405 are separated by 21 nucleotides B158DRAFT_0402: B158DRAFT_0402 - Thiol-disulfide isomerase and thioredoxins, at 407,939 to 408,781 _0402 B158DRAFT_0403: B158DRAFT_0403 - Putative translation factor (SUA5), at 408,981 to 409,544 _0403 B158DRAFT_0404: B158DRAFT_0404 - coproporphyrinogen oxidase (EC 1.3.3.3), at 409,554 to 410,480 _0404 B158DRAFT_0405: B158DRAFT_0405 - Delta-aminolevulinic acid dehydratase, at 410,502 to 411,503 _0405 Position (kb) 409 410 411Strain fitness (log2 ratio) -1 0 1at 408.583 kb on + strand, within B158DRAFT_0402at 408.589 kb on + strand, within B158DRAFT_0402at 408.591 kb on - strand, within B158DRAFT_0402at 408.597 kb on - strand, within B158DRAFT_0402at 408.611 kb on + strand, within B158DRAFT_0402at 408.611 kb on + strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.619 kb on - strand, within B158DRAFT_0402at 408.759 kb on + strandat 408.759 kb on + strandat 408.759 kb on + strandat 408.759 kb on + strandat 408.764 kb on + strandat 408.764 kb on + strandat 408.767 kb on - strandat 408.767 kb on - strandat 408.772 kb on - strandat 408.776 kb on + strandat 408.784 kb on - strandat 408.784 kb on - strandat 408.838 kb on - strandat 408.881 kb on + strandat 408.881 kb on + strandat 408.881 kb on + strandat 408.888 kb on + strandat 408.896 kb on - strandat 408.896 kb on - strandat 408.896 kb on - strandat 408.920 kb on + strandat 408.920 kb on + strandat 408.920 kb on + strandat 408.928 kb on - strandat 408.937 kb on - strandat 409.146 kb on + strand, within B158DRAFT_0403at 409.154 kb on - strand, within B158DRAFT_0403at 409.154 kb on - strand, within B158DRAFT_0403at 409.176 kb on - strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.178 kb on + strand, within B158DRAFT_0403at 409.182 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.183 kb on + strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.186 kb on - strand, within B158DRAFT_0403at 409.204 kb on + strand, within B158DRAFT_0403at 409.212 kb on - strand, within B158DRAFT_0403at 409.212 kb on - strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.270 kb on + strand, within B158DRAFT_0403at 409.279 kb on + strand, within B158DRAFT_0403at 409.376 kb on + strand, within B158DRAFT_0403at 409.420 kb on + strand, within B158DRAFT_0403at 409.420 kb on + strand, within B158DRAFT_0403at 409.430 kb on + strand, within B158DRAFT_0403at 409.447 kb on + strand, within B158DRAFT_0403at 409.522 kb on + strandat 409.545 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml
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408,583 + B158DRAFT_0402 0.76 +0.3
408,589 + B158DRAFT_0402 0.77 -0.0
408,591 - B158DRAFT_0402 0.77 -0.4
408,597 - B158DRAFT_0402 0.78 +0.3
408,611 + B158DRAFT_0402 0.80 +0.1
408,611 + B158DRAFT_0402 0.80 -0.4
408,619 - B158DRAFT_0402 0.81 +0.3
408,619 - B158DRAFT_0402 0.81 -0.1
408,619 - B158DRAFT_0402 0.81 -0.1
408,759 + +1.7
408,759 + -0.1
408,759 + -0.3
408,759 + +0.1
408,764 + +0.0
408,764 + -0.2
408,767 - -0.8
408,767 - -1.2
408,772 - -0.1
408,776 + +0.2
408,784 - -1.0
408,784 - -0.1
408,838 - -0.4
408,881 + -0.8
408,881 + -0.0
408,881 + -0.7
408,888 + -0.1
408,896 - +0.1
408,896 - +0.4
408,896 - +0.4
408,920 + -0.6
408,920 + -1.3
408,920 + -0.1
408,928 - +0.3
408,937 - +0.7
409,146 + B158DRAFT_0403 0.29 -0.1
409,154 - B158DRAFT_0403 0.31 +0.2
409,154 - B158DRAFT_0403 0.31 -0.1
409,176 - B158DRAFT_0403 0.35 +0.2
409,178 + B158DRAFT_0403 0.35 -0.0
409,178 + B158DRAFT_0403 0.35 +0.6
409,178 + B158DRAFT_0403 0.35 -1.0
409,178 + B158DRAFT_0403 0.35 +0.2
409,178 + B158DRAFT_0403 0.35 +0.3
409,178 + B158DRAFT_0403 0.35 -0.3
409,182 + B158DRAFT_0403 0.36 -0.4
409,183 + B158DRAFT_0403 0.36 -0.1
409,183 + B158DRAFT_0403 0.36 +0.0
409,183 + B158DRAFT_0403 0.36 -1.4
409,186 - B158DRAFT_0403 0.36 +0.1
409,186 - B158DRAFT_0403 0.36 +0.4
409,186 - B158DRAFT_0403 0.36 -0.1
409,204 + B158DRAFT_0403 0.40 -0.6
409,212 - B158DRAFT_0403 0.41 +0.3
409,212 - B158DRAFT_0403 0.41 +0.3
409,270 + B158DRAFT_0403 0.51 +0.1
409,270 + B158DRAFT_0403 0.51 -0.3
409,270 + B158DRAFT_0403 0.51 -0.7
409,270 + B158DRAFT_0403 0.51 -0.3
409,270 + B158DRAFT_0403 0.51 +0.2
409,279 + B158DRAFT_0403 0.53 +0.3
409,376 + B158DRAFT_0403 0.70 -0.4
409,420 + B158DRAFT_0403 0.78 -0.2
409,420 + B158DRAFT_0403 0.78 -0.0
409,430 + B158DRAFT_0403 0.80 -0.7
409,447 + B158DRAFT_0403 0.83 -1.1
409,522 + -0.2
409,545 + +0.1

Or see this region's nucleotide sequence