Experiment: m.b. Paraquat dichloride 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0002 and B158DRAFT_0003 are separated by 235 nucleotides B158DRAFT_0003 and B158DRAFT_0004 are separated by 6 nucleotides
B158DRAFT_0002: B158DRAFT_0002 - tyrosyl-tRNA synthetase (EC 6.1.1.1), at 2,045 to 3,241
_0002
B158DRAFT_0003: B158DRAFT_0003 - Membrane proteins related to metalloendopeptidases, at 3,477 to 4,988
_0003
B158DRAFT_0004: B158DRAFT_0004 - Predicted molecular chaperone distantly related to HSP70-fold metalloproteases, at 4,995 to 6,101
_0004
Position (kb) 3
4
5 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3.278 kb on - strand at 3.297 kb on - strand at 3.297 kb on - strand at 3.912 kb on + strand, within B158DRAFT_0003 at 3.912 kb on + strand, within B158DRAFT_0003 at 3.920 kb on - strand, within B158DRAFT_0003 at 3.920 kb on - strand, within B158DRAFT_0003 at 3.920 kb on - strand, within B158DRAFT_0003 at 3.920 kb on - strand, within B158DRAFT_0003 at 3.927 kb on + strand, within B158DRAFT_0003 at 3.927 kb on + strand, within B158DRAFT_0003 at 3.927 kb on + strand, within B158DRAFT_0003 at 3.935 kb on - strand, within B158DRAFT_0003 at 4.191 kb on + strand, within B158DRAFT_0003 at 4.437 kb on - strand, within B158DRAFT_0003 at 4.477 kb on - strand, within B158DRAFT_0003 at 4.523 kb on - strand, within B158DRAFT_0003 at 4.595 kb on - strand, within B158DRAFT_0003 at 4.704 kb on + strand, within B158DRAFT_0003 at 4.714 kb on + strand, within B158DRAFT_0003 at 4.714 kb on + strand, within B158DRAFT_0003 at 4.845 kb on + strand at 4.878 kb on + strand at 4.967 kb on - strand at 5.038 kb on + strand at 5.175 kb on - strand, within B158DRAFT_0004 at 5.257 kb on + strand, within B158DRAFT_0004 at 5.290 kb on + strand, within B158DRAFT_0004 at 5.332 kb on - strand, within B158DRAFT_0004 at 5.355 kb on + strand, within B158DRAFT_0004 at 5.363 kb on - strand, within B158DRAFT_0004 at 5.417 kb on + strand, within B158DRAFT_0004 at 5.417 kb on + strand, within B158DRAFT_0004 at 5.435 kb on - strand, within B158DRAFT_0004 at 5.439 kb on + strand, within B158DRAFT_0004 at 5.439 kb on + strand, within B158DRAFT_0004 at 5.439 kb on + strand, within B158DRAFT_0004 at 5.444 kb on + strand, within B158DRAFT_0004 at 5.447 kb on - strand, within B158DRAFT_0004 at 5.481 kb on + strand, within B158DRAFT_0004 at 5.481 kb on + strand, within B158DRAFT_0004 at 5.489 kb on - strand, within B158DRAFT_0004 at 5.489 kb on - strand, within B158DRAFT_0004 at 5.517 kb on + strand, within B158DRAFT_0004 at 5.576 kb on - strand, within B158DRAFT_0004 at 5.610 kb on - strand, within B158DRAFT_0004 at 5.642 kb on - strand, within B158DRAFT_0004 at 5.703 kb on + strand, within B158DRAFT_0004 at 5.703 kb on + strand, within B158DRAFT_0004 at 5.711 kb on - strand, within B158DRAFT_0004 at 5.711 kb on - strand, within B158DRAFT_0004 at 5.736 kb on - strand, within B158DRAFT_0004 at 5.760 kb on - strand, within B158DRAFT_0004 at 5.857 kb on - strand, within B158DRAFT_0004 at 5.866 kb on + strand, within B158DRAFT_0004 at 5.868 kb on + strand, within B158DRAFT_0004 at 5.874 kb on - strand, within B158DRAFT_0004 at 5.874 kb on - strand, within B158DRAFT_0004 at 5.874 kb on - strand, within B158DRAFT_0004 at 5.876 kb on - strand, within B158DRAFT_0004 at 5.876 kb on - strand, within B158DRAFT_0004 at 5.876 kb on - strand, within B158DRAFT_0004 at 5.958 kb on - strand, within B158DRAFT_0004 at 5.970 kb on + strand, within B158DRAFT_0004 at 5.970 kb on + strand, within B158DRAFT_0004 at 5.978 kb on - strand, within B158DRAFT_0004 at 5.980 kb on + strand, within B158DRAFT_0004 at 5.988 kb on - strand, within B158DRAFT_0004
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.00390625 mg/ml remove 3,278 - +0.2 3,297 - -1.2 3,297 - -0.5 3,912 + B158DRAFT_0003 0.29 +1.6 3,912 + B158DRAFT_0003 0.29 +1.7 3,920 - B158DRAFT_0003 0.29 +1.6 3,920 - B158DRAFT_0003 0.29 +1.5 3,920 - B158DRAFT_0003 0.29 +1.0 3,920 - B158DRAFT_0003 0.29 +1.4 3,927 + B158DRAFT_0003 0.30 +2.3 3,927 + B158DRAFT_0003 0.30 +1.6 3,927 + B158DRAFT_0003 0.30 +2.5 3,935 - B158DRAFT_0003 0.30 +1.6 4,191 + B158DRAFT_0003 0.47 +1.9 4,437 - B158DRAFT_0003 0.63 +1.9 4,477 - B158DRAFT_0003 0.66 +0.9 4,523 - B158DRAFT_0003 0.69 +1.9 4,595 - B158DRAFT_0003 0.74 +1.4 4,704 + B158DRAFT_0003 0.81 +1.8 4,714 + B158DRAFT_0003 0.82 +2.1 4,714 + B158DRAFT_0003 0.82 +1.5 4,845 + +1.3 4,878 + -0.2 4,967 - -1.2 5,038 + -2.4 5,175 - B158DRAFT_0004 0.16 -2.6 5,257 + B158DRAFT_0004 0.24 -0.9 5,290 + B158DRAFT_0004 0.27 -1.1 5,332 - B158DRAFT_0004 0.30 +0.7 5,355 + B158DRAFT_0004 0.33 -0.2 5,363 - B158DRAFT_0004 0.33 -2.3 5,417 + B158DRAFT_0004 0.38 -2.8 5,417 + B158DRAFT_0004 0.38 -2.1 5,435 - B158DRAFT_0004 0.40 -1.2 5,439 + B158DRAFT_0004 0.40 -2.9 5,439 + B158DRAFT_0004 0.40 -1.5 5,439 + B158DRAFT_0004 0.40 -2.2 5,444 + B158DRAFT_0004 0.41 -0.7 5,447 - B158DRAFT_0004 0.41 -0.8 5,481 + B158DRAFT_0004 0.44 -2.3 5,481 + B158DRAFT_0004 0.44 -1.7 5,489 - B158DRAFT_0004 0.45 -1.8 5,489 - B158DRAFT_0004 0.45 -1.5 5,517 + B158DRAFT_0004 0.47 -0.5 5,576 - B158DRAFT_0004 0.52 -3.1 5,610 - B158DRAFT_0004 0.56 -3.2 5,642 - B158DRAFT_0004 0.58 -2.3 5,703 + B158DRAFT_0004 0.64 -1.5 5,703 + B158DRAFT_0004 0.64 -1.6 5,711 - B158DRAFT_0004 0.65 -0.9 5,711 - B158DRAFT_0004 0.65 -2.6 5,736 - B158DRAFT_0004 0.67 -1.9 5,760 - B158DRAFT_0004 0.69 -1.5 5,857 - B158DRAFT_0004 0.78 -3.2 5,866 + B158DRAFT_0004 0.79 -1.2 5,868 + B158DRAFT_0004 0.79 -1.5 5,874 - B158DRAFT_0004 0.79 -2.0 5,874 - B158DRAFT_0004 0.79 -0.3 5,874 - B158DRAFT_0004 0.79 -1.0 5,876 - B158DRAFT_0004 0.80 -2.0 5,876 - B158DRAFT_0004 0.80 -3.5 5,876 - B158DRAFT_0004 0.80 -2.5 5,958 - B158DRAFT_0004 0.87 -2.1 5,970 + B158DRAFT_0004 0.88 -1.6 5,970 + B158DRAFT_0004 0.88 -2.1 5,978 - B158DRAFT_0004 0.89 -1.9 5,980 + B158DRAFT_0004 0.89 -0.3 5,988 - B158DRAFT_0004 0.90 -1.9
Or see this region's nucleotide sequence