Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2185

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2184 and B158DRAFT_2185 are separated by 15 nucleotidesB158DRAFT_2185 and B158DRAFT_2186 are separated by 74 nucleotidesB158DRAFT_2186 and B158DRAFT_2187 are separated by 33 nucleotides B158DRAFT_2184: B158DRAFT_2184 - GTP-binding protein LepA, at 331,318 to 333,126 _2184 B158DRAFT_2185: B158DRAFT_2185 - signal peptidase I, bacterial type, at 333,142 to 334,008 _2185 B158DRAFT_2186: B158DRAFT_2186 - hypothetical protein, at 334,083 to 334,448 _2186 B158DRAFT_2187: B158DRAFT_2187 - ribonuclease III, bacterial, at 334,482 to 335,171 _2187 Position (kb) 333 334 335Strain fitness (log2 ratio) -2 -1 0 1at 332.142 kb on + strand, within B158DRAFT_2184at 332.196 kb on + strand, within B158DRAFT_2184at 332.196 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.208 kb on + strand, within B158DRAFT_2184at 332.213 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.234 kb on + strand, within B158DRAFT_2184at 332.273 kb on + strand, within B158DRAFT_2184at 332.313 kb on + strand, within B158DRAFT_2184at 332.313 kb on + strand, within B158DRAFT_2184at 332.386 kb on + strand, within B158DRAFT_2184at 332.461 kb on + strand, within B158DRAFT_2184at 332.593 kb on + strand, within B158DRAFT_2184at 332.608 kb on + strand, within B158DRAFT_2184at 332.608 kb on + strand, within B158DRAFT_2184at 332.644 kb on + strand, within B158DRAFT_2184at 332.644 kb on + strand, within B158DRAFT_2184at 332.677 kb on + strand, within B158DRAFT_2184at 332.697 kb on + strand, within B158DRAFT_2184at 332.748 kb on + strand, within B158DRAFT_2184at 332.848 kb on + strand, within B158DRAFT_2184at 332.876 kb on + strand, within B158DRAFT_2184at 332.877 kb on + strand, within B158DRAFT_2184at 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 332.982 kb on + strandat 333.008 kb on + strandat 333.008 kb on + strandat 333.989 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.063 kb on + strandat 334.107 kb on + strandat 334.134 kb on + strand, within B158DRAFT_2186at 334.304 kb on + strand, within B158DRAFT_2186at 334.340 kb on + strand, within B158DRAFT_2186at 334.546 kb on + strandat 334.553 kb on + strand, within B158DRAFT_2187at 334.616 kb on + strand, within B158DRAFT_2187at 334.677 kb on + strand, within B158DRAFT_2187at 334.686 kb on + strand, within B158DRAFT_2187at 334.718 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.931 kb on + strand, within B158DRAFT_2187at 334.994 kb on + strand, within B158DRAFT_2187

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
remove
332,142 + B158DRAFT_2184 0.46 +0.1
332,196 + B158DRAFT_2184 0.49 +0.8
332,196 + B158DRAFT_2184 0.49 +0.6
332,208 + B158DRAFT_2184 0.49 +0.5
332,208 + B158DRAFT_2184 0.49 -0.8
332,208 + B158DRAFT_2184 0.49 -0.8
332,208 + B158DRAFT_2184 0.49 -0.2
332,208 + B158DRAFT_2184 0.49 +0.7
332,213 + B158DRAFT_2184 0.49 +0.1
332,234 + B158DRAFT_2184 0.51 +0.4
332,234 + B158DRAFT_2184 0.51 +0.1
332,234 + B158DRAFT_2184 0.51 -0.3
332,273 + B158DRAFT_2184 0.53 +1.0
332,313 + B158DRAFT_2184 0.55 -0.2
332,313 + B158DRAFT_2184 0.55 -0.8
332,386 + B158DRAFT_2184 0.59 -0.5
332,461 + B158DRAFT_2184 0.63 +0.3
332,593 + B158DRAFT_2184 0.70 -1.2
332,608 + B158DRAFT_2184 0.71 -0.5
332,608 + B158DRAFT_2184 0.71 -0.1
332,644 + B158DRAFT_2184 0.73 -0.9
332,644 + B158DRAFT_2184 0.73 -0.6
332,677 + B158DRAFT_2184 0.75 +0.2
332,697 + B158DRAFT_2184 0.76 +0.6
332,748 + B158DRAFT_2184 0.79 -1.9
332,848 + B158DRAFT_2184 0.85 +0.4
332,876 + B158DRAFT_2184 0.86 +0.2
332,877 + B158DRAFT_2184 0.86 -0.0
332,982 + -1.4
332,982 + -0.2
332,982 + -1.1
332,982 + +1.2
332,982 + +1.4
333,008 + -0.6
333,008 + +0.3
333,989 + +0.1
334,063 + -0.6
334,063 + -0.1
334,063 + -0.0
334,063 + +0.7
334,107 + -1.3
334,134 + B158DRAFT_2186 0.14 -0.8
334,304 + B158DRAFT_2186 0.60 +1.4
334,340 + B158DRAFT_2186 0.70 +0.9
334,546 + +0.0
334,553 + B158DRAFT_2187 0.10 -0.0
334,616 + B158DRAFT_2187 0.19 +0.2
334,677 + B158DRAFT_2187 0.28 +0.7
334,686 + B158DRAFT_2187 0.30 -0.1
334,718 + B158DRAFT_2187 0.34 +0.2
334,931 + B158DRAFT_2187 0.65 +0.2
334,931 + B158DRAFT_2187 0.65 +0.2
334,931 + B158DRAFT_2187 0.65 +0.3
334,931 + B158DRAFT_2187 0.65 +0.1
334,931 + B158DRAFT_2187 0.65 +0.1
334,931 + B158DRAFT_2187 0.65 +0.1
334,931 + B158DRAFT_2187 0.65 +0.4
334,931 + B158DRAFT_2187 0.65 +0.4
334,931 + B158DRAFT_2187 0.65 +1.0
334,931 + B158DRAFT_2187 0.65 +0.5
334,931 + B158DRAFT_2187 0.65 -0.9
334,931 + B158DRAFT_2187 0.65 +0.0
334,931 + B158DRAFT_2187 0.65 -0.3
334,931 + B158DRAFT_2187 0.65 -0.1
334,931 + B158DRAFT_2187 0.65 -0.2
334,931 + B158DRAFT_2187 0.65 +0.3
334,931 + B158DRAFT_2187 0.65 -0.4
334,931 + B158DRAFT_2187 0.65 +0.6
334,931 + B158DRAFT_2187 0.65 +0.4
334,931 + B158DRAFT_2187 0.65 +0.3
334,931 + B158DRAFT_2187 0.65 +0.3
334,931 + B158DRAFT_2187 0.65 -0.1
334,931 + B158DRAFT_2187 0.65 +0.3
334,931 + B158DRAFT_2187 0.65 -0.1
334,931 + B158DRAFT_2187 0.65 -2.5
334,931 + B158DRAFT_2187 0.65 +0.2
334,931 + B158DRAFT_2187 0.65 +0.0
334,931 + B158DRAFT_2187 0.65 +0.9
334,994 + B158DRAFT_2187 0.74 -0.5

Or see this region's nucleotide sequence