Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2175

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2173 and B158DRAFT_2174 are separated by 105 nucleotidesB158DRAFT_2174 and B158DRAFT_2175 are separated by 114 nucleotidesB158DRAFT_2175 and B158DRAFT_2176 are separated by 75 nucleotides B158DRAFT_2173: B158DRAFT_2173 - lysyl-tRNA synthetase, class II (EC 6.1.1.6), at 319,850 to 321,349 _2173 B158DRAFT_2174: B158DRAFT_2174 - Protein of unknown function (DUF3081)., at 321,455 to 321,730 _2174 B158DRAFT_2175: B158DRAFT_2175 - Uncharacterized protein conserved in bacteria, at 321,845 to 323,692 _2175 B158DRAFT_2176: B158DRAFT_2176 - folate-binding protein YgfZ, at 323,768 to 324,706 _2176 Position (kb) 321 322 323 324Strain fitness (log2 ratio) -1 0 1at 321.347 kb on - strandat 321.464 kb on + strandat 321.483 kb on + strand, within B158DRAFT_2174at 321.489 kb on - strand, within B158DRAFT_2174at 321.494 kb on + strand, within B158DRAFT_2174at 321.757 kb on - strandat 321.794 kb on + strandat 321.794 kb on + strandat 321.796 kb on + strandat 321.802 kb on - strandat 321.875 kb on + strandat 321.984 kb on - strandat 322.109 kb on + strand, within B158DRAFT_2175at 322.117 kb on - strand, within B158DRAFT_2175at 322.167 kb on + strand, within B158DRAFT_2175at 322.167 kb on - strand, within B158DRAFT_2175at 322.190 kb on + strand, within B158DRAFT_2175at 322.190 kb on + strand, within B158DRAFT_2175at 322.190 kb on + strand, within B158DRAFT_2175at 322.198 kb on - strand, within B158DRAFT_2175at 322.198 kb on - strand, within B158DRAFT_2175at 322.198 kb on - strand, within B158DRAFT_2175at 322.206 kb on + strand, within B158DRAFT_2175at 322.206 kb on + strand, within B158DRAFT_2175at 322.206 kb on + strand, within B158DRAFT_2175at 322.214 kb on - strand, within B158DRAFT_2175at 322.224 kb on - strand, within B158DRAFT_2175at 322.228 kb on + strand, within B158DRAFT_2175at 322.236 kb on - strand, within B158DRAFT_2175at 322.248 kb on - strand, within B158DRAFT_2175at 322.287 kb on + strand, within B158DRAFT_2175at 322.332 kb on + strand, within B158DRAFT_2175at 322.332 kb on + strand, within B158DRAFT_2175at 322.332 kb on + strand, within B158DRAFT_2175at 322.332 kb on + strand, within B158DRAFT_2175at 322.340 kb on - strand, within B158DRAFT_2175at 322.340 kb on - strand, within B158DRAFT_2175at 322.340 kb on - strand, within B158DRAFT_2175at 322.340 kb on - strand, within B158DRAFT_2175at 322.342 kb on + strand, within B158DRAFT_2175at 322.350 kb on - strand, within B158DRAFT_2175at 322.350 kb on - strand, within B158DRAFT_2175at 322.401 kb on + strand, within B158DRAFT_2175at 322.409 kb on - strand, within B158DRAFT_2175at 322.409 kb on - strand, within B158DRAFT_2175at 322.434 kb on + strand, within B158DRAFT_2175at 322.434 kb on + strand, within B158DRAFT_2175at 322.434 kb on + strand, within B158DRAFT_2175at 322.439 kb on + strand, within B158DRAFT_2175at 322.442 kb on - strand, within B158DRAFT_2175at 322.442 kb on - strand, within B158DRAFT_2175at 322.442 kb on - strand, within B158DRAFT_2175at 322.471 kb on + strand, within B158DRAFT_2175at 322.497 kb on - strand, within B158DRAFT_2175at 322.497 kb on - strand, within B158DRAFT_2175at 322.497 kb on - strand, within B158DRAFT_2175at 322.497 kb on - strand, within B158DRAFT_2175at 322.597 kb on - strand, within B158DRAFT_2175at 322.620 kb on + strand, within B158DRAFT_2175at 322.625 kb on + strand, within B158DRAFT_2175at 322.625 kb on + strand, within B158DRAFT_2175at 322.625 kb on + strand, within B158DRAFT_2175at 322.633 kb on - strand, within B158DRAFT_2175at 322.650 kb on + strand, within B158DRAFT_2175at 322.763 kb on - strand, within B158DRAFT_2175at 322.830 kb on + strand, within B158DRAFT_2175at 322.888 kb on + strand, within B158DRAFT_2175at 322.950 kb on + strand, within B158DRAFT_2175at 322.960 kb on + strand, within B158DRAFT_2175at 322.960 kb on + strand, within B158DRAFT_2175at 322.968 kb on - strand, within B158DRAFT_2175at 322.968 kb on - strand, within B158DRAFT_2175at 322.968 kb on - strand, within B158DRAFT_2175at 322.970 kb on + strand, within B158DRAFT_2175at 323.028 kb on - strand, within B158DRAFT_2175at 323.049 kb on - strand, within B158DRAFT_2175at 323.063 kb on - strand, within B158DRAFT_2175at 323.082 kb on - strand, within B158DRAFT_2175at 323.093 kb on + strand, within B158DRAFT_2175at 323.120 kb on - strand, within B158DRAFT_2175at 323.131 kb on + strand, within B158DRAFT_2175at 323.270 kb on + strand, within B158DRAFT_2175at 323.318 kb on - strand, within B158DRAFT_2175at 323.318 kb on - strand, within B158DRAFT_2175at 323.318 kb on - strand, within B158DRAFT_2175at 323.329 kb on - strand, within B158DRAFT_2175at 323.399 kb on + strand, within B158DRAFT_2175at 323.399 kb on + strand, within B158DRAFT_2175at 323.409 kb on + strand, within B158DRAFT_2175at 323.409 kb on + strand, within B158DRAFT_2175at 323.425 kb on - strand, within B158DRAFT_2175at 323.527 kb on + strandat 323.629 kb on + strandat 323.760 kb on + strandat 324.658 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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321,347 - +0.1
321,464 + -0.2
321,483 + B158DRAFT_2174 0.10 +0.0
321,489 - B158DRAFT_2174 0.12 -0.9
321,494 + B158DRAFT_2174 0.14 -0.2
321,757 - +0.2
321,794 + -0.1
321,794 + -0.0
321,796 + -0.6
321,802 - -0.3
321,875 + -0.7
321,984 - -0.0
322,109 + B158DRAFT_2175 0.14 -0.2
322,117 - B158DRAFT_2175 0.15 -0.2
322,167 + B158DRAFT_2175 0.17 -0.1
322,167 - B158DRAFT_2175 0.17 -1.0
322,190 + B158DRAFT_2175 0.19 +1.3
322,190 + B158DRAFT_2175 0.19 +0.0
322,190 + B158DRAFT_2175 0.19 -0.9
322,198 - B158DRAFT_2175 0.19 -0.4
322,198 - B158DRAFT_2175 0.19 +0.2
322,198 - B158DRAFT_2175 0.19 +0.5
322,206 + B158DRAFT_2175 0.20 +0.3
322,206 + B158DRAFT_2175 0.20 -0.5
322,206 + B158DRAFT_2175 0.20 -0.6
322,214 - B158DRAFT_2175 0.20 +0.8
322,224 - B158DRAFT_2175 0.21 -0.2
322,228 + B158DRAFT_2175 0.21 -0.3
322,236 - B158DRAFT_2175 0.21 +0.4
322,248 - B158DRAFT_2175 0.22 +0.5
322,287 + B158DRAFT_2175 0.24 -0.0
322,332 + B158DRAFT_2175 0.26 -0.6
322,332 + B158DRAFT_2175 0.26 +0.1
322,332 + B158DRAFT_2175 0.26 +0.6
322,332 + B158DRAFT_2175 0.26 +0.6
322,340 - B158DRAFT_2175 0.27 +0.1
322,340 - B158DRAFT_2175 0.27 +0.0
322,340 - B158DRAFT_2175 0.27 -0.1
322,340 - B158DRAFT_2175 0.27 +0.5
322,342 + B158DRAFT_2175 0.27 -0.4
322,350 - B158DRAFT_2175 0.27 -0.2
322,350 - B158DRAFT_2175 0.27 -0.2
322,401 + B158DRAFT_2175 0.30 +0.7
322,409 - B158DRAFT_2175 0.31 -0.1
322,409 - B158DRAFT_2175 0.31 +0.9
322,434 + B158DRAFT_2175 0.32 -0.6
322,434 + B158DRAFT_2175 0.32 +0.2
322,434 + B158DRAFT_2175 0.32 -0.1
322,439 + B158DRAFT_2175 0.32 +0.3
322,442 - B158DRAFT_2175 0.32 +0.1
322,442 - B158DRAFT_2175 0.32 -0.0
322,442 - B158DRAFT_2175 0.32 +0.3
322,471 + B158DRAFT_2175 0.34 -0.8
322,497 - B158DRAFT_2175 0.35 -0.0
322,497 - B158DRAFT_2175 0.35 -0.4
322,497 - B158DRAFT_2175 0.35 -0.0
322,497 - B158DRAFT_2175 0.35 +0.3
322,597 - B158DRAFT_2175 0.41 +0.1
322,620 + B158DRAFT_2175 0.42 +0.4
322,625 + B158DRAFT_2175 0.42 -0.0
322,625 + B158DRAFT_2175 0.42 -0.3
322,625 + B158DRAFT_2175 0.42 +0.2
322,633 - B158DRAFT_2175 0.43 +0.2
322,650 + B158DRAFT_2175 0.44 +0.8
322,763 - B158DRAFT_2175 0.50 -0.0
322,830 + B158DRAFT_2175 0.53 -0.2
322,888 + B158DRAFT_2175 0.56 -0.1
322,950 + B158DRAFT_2175 0.60 -0.4
322,960 + B158DRAFT_2175 0.60 +0.2
322,960 + B158DRAFT_2175 0.60 -0.8
322,968 - B158DRAFT_2175 0.61 -0.4
322,968 - B158DRAFT_2175 0.61 +0.6
322,968 - B158DRAFT_2175 0.61 -0.2
322,970 + B158DRAFT_2175 0.61 +0.1
323,028 - B158DRAFT_2175 0.64 +0.1
323,049 - B158DRAFT_2175 0.65 -0.3
323,063 - B158DRAFT_2175 0.66 -0.4
323,082 - B158DRAFT_2175 0.67 -0.8
323,093 + B158DRAFT_2175 0.68 +0.1
323,120 - B158DRAFT_2175 0.69 +0.2
323,131 + B158DRAFT_2175 0.70 +0.2
323,270 + B158DRAFT_2175 0.77 +1.0
323,318 - B158DRAFT_2175 0.80 -0.1
323,318 - B158DRAFT_2175 0.80 +0.1
323,318 - B158DRAFT_2175 0.80 -0.7
323,329 - B158DRAFT_2175 0.80 +0.7
323,399 + B158DRAFT_2175 0.84 -0.2
323,399 + B158DRAFT_2175 0.84 +0.6
323,409 + B158DRAFT_2175 0.85 -0.6
323,409 + B158DRAFT_2175 0.85 -0.7
323,425 - B158DRAFT_2175 0.85 -0.2
323,527 + -0.2
323,629 + +0.7
323,760 + +0.3
324,658 - -1.1

Or see this region's nucleotide sequence