Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1783 and B158DRAFT_1784 overlap by 23 nucleotides B158DRAFT_1784 and B158DRAFT_1785 are separated by 37 nucleotides B158DRAFT_1785 and B158DRAFT_1786 are separated by 19 nucleotides B158DRAFT_1786 and B158DRAFT_1787 are separated by 455 nucleotides
B158DRAFT_1783: B158DRAFT_1783 - Choline/ethanolamine kinase., at 1,877,954 to 1,878,790
_1783
B158DRAFT_1784: B158DRAFT_1784 - nicotinamide mononucleotide transporter PnuC, at 1,878,768 to 1,879,379
_1784
B158DRAFT_1785: B158DRAFT_1785 - Domain of unknown function DUF77., at 1,879,417 to 1,879,668
_1785
B158DRAFT_1786: B158DRAFT_1786 - Outer membrane receptor proteins, mostly Fe transport, at 1,879,688 to 1,881,883
_1786
B158DRAFT_1787: B158DRAFT_1787 - hypothetical protein, at 1,882,339 to 1,883,112
_1787
Position (kb)
1879
1880
1881
1882 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1878.775 kb on + strand at 1878.775 kb on + strand at 1878.783 kb on - strand at 1878.787 kb on + strand at 1878.790 kb on - strand at 1878.795 kb on - strand at 1878.795 kb on - strand at 1878.803 kb on + strand at 1878.822 kb on + strand at 1878.830 kb on - strand, within B158DRAFT_1784 at 1878.830 kb on - strand, within B158DRAFT_1784 at 1878.944 kb on - strand, within B158DRAFT_1784 at 1878.955 kb on + strand, within B158DRAFT_1784 at 1878.955 kb on + strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.963 kb on - strand, within B158DRAFT_1784 at 1878.965 kb on + strand, within B158DRAFT_1784 at 1878.973 kb on - strand, within B158DRAFT_1784 at 1879.069 kb on - strand, within B158DRAFT_1784 at 1879.107 kb on - strand, within B158DRAFT_1784 at 1879.157 kb on - strand, within B158DRAFT_1784 at 1879.185 kb on - strand, within B158DRAFT_1784 at 1879.215 kb on + strand, within B158DRAFT_1784 at 1879.223 kb on - strand, within B158DRAFT_1784 at 1879.223 kb on - strand, within B158DRAFT_1784 at 1879.223 kb on - strand, within B158DRAFT_1784 at 1879.256 kb on + strand, within B158DRAFT_1784 at 1879.302 kb on + strand, within B158DRAFT_1784 at 1879.310 kb on - strand, within B158DRAFT_1784 at 1879.331 kb on - strand at 1879.360 kb on - strand at 1879.486 kb on + strand, within B158DRAFT_1785 at 1879.494 kb on - strand, within B158DRAFT_1785 at 1879.494 kb on - strand, within B158DRAFT_1785 at 1879.520 kb on + strand, within B158DRAFT_1785 at 1879.566 kb on - strand, within B158DRAFT_1785 at 1879.652 kb on - strand at 1879.652 kb on - strand at 1879.663 kb on - strand at 1879.694 kb on + strand at 1879.694 kb on + strand at 1879.736 kb on - strand at 1879.858 kb on + strand at 1879.899 kb on + strand at 1879.899 kb on + strand at 1879.899 kb on + strand at 1879.907 kb on - strand at 1879.907 kb on - strand at 1879.907 kb on - strand at 1879.907 kb on - strand at 1880.171 kb on - strand, within B158DRAFT_1786 at 1880.208 kb on + strand, within B158DRAFT_1786 at 1880.216 kb on - strand, within B158DRAFT_1786 at 1880.243 kb on + strand, within B158DRAFT_1786 at 1880.301 kb on + strand, within B158DRAFT_1786 at 1880.329 kb on + strand, within B158DRAFT_1786 at 1880.432 kb on - strand, within B158DRAFT_1786 at 1880.443 kb on - strand, within B158DRAFT_1786 at 1880.443 kb on - strand, within B158DRAFT_1786 at 1880.460 kb on + strand, within B158DRAFT_1786 at 1880.600 kb on - strand, within B158DRAFT_1786 at 1880.633 kb on - strand, within B158DRAFT_1786 at 1880.648 kb on + strand, within B158DRAFT_1786 at 1880.648 kb on + strand, within B158DRAFT_1786 at 1880.656 kb on - strand, within B158DRAFT_1786 at 1880.656 kb on - strand, within B158DRAFT_1786 at 1880.656 kb on - strand, within B158DRAFT_1786 at 1880.656 kb on - strand, within B158DRAFT_1786 at 1880.668 kb on - strand, within B158DRAFT_1786 at 1880.790 kb on + strand, within B158DRAFT_1786 at 1880.790 kb on + strand, within B158DRAFT_1786 at 1880.790 kb on + strand, within B158DRAFT_1786 at 1880.798 kb on - strand, within B158DRAFT_1786 at 1880.798 kb on - strand, within B158DRAFT_1786 at 1880.803 kb on - strand, within B158DRAFT_1786 at 1880.803 kb on - strand, within B158DRAFT_1786 at 1880.824 kb on + strand, within B158DRAFT_1786 at 1880.832 kb on - strand, within B158DRAFT_1786 at 1880.930 kb on + strand, within B158DRAFT_1786 at 1880.938 kb on - strand, within B158DRAFT_1786 at 1880.938 kb on - strand, within B158DRAFT_1786 at 1880.938 kb on - strand, within B158DRAFT_1786 at 1880.938 kb on - strand, within B158DRAFT_1786 at 1880.938 kb on - strand, within B158DRAFT_1786 at 1880.949 kb on + strand, within B158DRAFT_1786 at 1880.949 kb on + strand, within B158DRAFT_1786 at 1880.949 kb on + strand, within B158DRAFT_1786 at 1880.957 kb on - strand, within B158DRAFT_1786 at 1880.975 kb on + strand, within B158DRAFT_1786 at 1880.985 kb on - strand, within B158DRAFT_1786 at 1880.990 kb on - strand, within B158DRAFT_1786 at 1880.992 kb on + strand, within B158DRAFT_1786 at 1881.010 kb on - strand, within B158DRAFT_1786 at 1881.010 kb on - strand, within B158DRAFT_1786 at 1881.011 kb on - strand, within B158DRAFT_1786 at 1881.064 kb on + strand, within B158DRAFT_1786 at 1881.072 kb on - strand, within B158DRAFT_1786 at 1881.077 kb on - strand, within B158DRAFT_1786 at 1881.084 kb on + strand, within B158DRAFT_1786 at 1881.084 kb on + strand, within B158DRAFT_1786 at 1881.084 kb on + strand, within B158DRAFT_1786 at 1881.084 kb on + strand, within B158DRAFT_1786 at 1881.087 kb on - strand, within B158DRAFT_1786 at 1881.092 kb on - strand, within B158DRAFT_1786 at 1881.092 kb on - strand, within B158DRAFT_1786 at 1881.102 kb on - strand, within B158DRAFT_1786 at 1881.136 kb on + strand, within B158DRAFT_1786 at 1881.181 kb on - strand, within B158DRAFT_1786 at 1881.255 kb on + strand, within B158DRAFT_1786 at 1881.268 kb on - strand, within B158DRAFT_1786 at 1881.293 kb on + strand, within B158DRAFT_1786 at 1881.299 kb on + strand, within B158DRAFT_1786 at 1881.302 kb on - strand, within B158DRAFT_1786 at 1881.312 kb on - strand, within B158DRAFT_1786 at 1881.322 kb on - strand, within B158DRAFT_1786 at 1881.322 kb on - strand, within B158DRAFT_1786 at 1881.336 kb on + strand, within B158DRAFT_1786 at 1881.344 kb on - strand, within B158DRAFT_1786 at 1881.395 kb on - strand, within B158DRAFT_1786 at 1881.411 kb on + strand, within B158DRAFT_1786 at 1881.423 kb on + strand, within B158DRAFT_1786 at 1881.478 kb on + strand, within B158DRAFT_1786 at 1881.587 kb on - strand, within B158DRAFT_1786 at 1881.587 kb on - strand, within B158DRAFT_1786 at 1881.623 kb on + strand, within B158DRAFT_1786 at 1881.666 kb on + strand at 1881.690 kb on + strand at 1881.698 kb on - strand at 1881.719 kb on + strand at 1881.727 kb on - strand at 1881.727 kb on - strand at 1881.747 kb on + strand at 1881.770 kb on - strand at 1881.778 kb on - strand at 1881.883 kb on + strand at 1881.912 kb on + strand at 1881.966 kb on - strand at 1881.968 kb on + strand at 1881.968 kb on + strand at 1881.976 kb on - strand at 1882.042 kb on - strand at 1882.076 kb on + strand at 1882.114 kb on + strand at 1882.149 kb on + strand at 1882.210 kb on - strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.234 kb on + strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.242 kb on - strand at 1882.268 kb on + strand at 1882.302 kb on + strand at 1882.302 kb on + strand at 1882.302 kb on + strand at 1882.308 kb on + strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.310 kb on - strand at 1882.323 kb on - strand at 1882.331 kb on + strand at 1882.339 kb on + strand at 1882.348 kb on + strand at 1882.357 kb on - strand at 1882.461 kb on - strand, within B158DRAFT_1787 at 1882.627 kb on - strand, within B158DRAFT_1787 at 1882.656 kb on + strand, within B158DRAFT_1787 at 1882.718 kb on + strand, within B158DRAFT_1787 at 1882.754 kb on + strand, within B158DRAFT_1787 at 1882.754 kb on + strand, within B158DRAFT_1787 at 1882.754 kb on + strand, within B158DRAFT_1787 at 1882.762 kb on - strand, within B158DRAFT_1787 at 1882.762 kb on - strand, within B158DRAFT_1787 at 1882.793 kb on + strand, within B158DRAFT_1787
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml remove 1,878,775 + -0.3 1,878,775 + -0.2 1,878,783 - -0.7 1,878,787 + -0.6 1,878,790 - -0.6 1,878,795 - +0.5 1,878,795 - +0.2 1,878,803 + -0.8 1,878,822 + +0.2 1,878,830 - B158DRAFT_1784 0.10 -0.7 1,878,830 - B158DRAFT_1784 0.10 -0.9 1,878,944 - B158DRAFT_1784 0.29 -0.4 1,878,955 + B158DRAFT_1784 0.31 -0.2 1,878,955 + B158DRAFT_1784 0.31 -0.8 1,878,963 - B158DRAFT_1784 0.32 -1.2 1,878,963 - B158DRAFT_1784 0.32 -0.5 1,878,963 - B158DRAFT_1784 0.32 -0.3 1,878,963 - B158DRAFT_1784 0.32 +0.1 1,878,963 - B158DRAFT_1784 0.32 +1.0 1,878,963 - B158DRAFT_1784 0.32 -0.5 1,878,963 - B158DRAFT_1784 0.32 +0.2 1,878,963 - B158DRAFT_1784 0.32 -0.2 1,878,965 + B158DRAFT_1784 0.32 -0.5 1,878,973 - B158DRAFT_1784 0.33 -0.6 1,879,069 - B158DRAFT_1784 0.49 -0.3 1,879,107 - B158DRAFT_1784 0.55 -0.6 1,879,157 - B158DRAFT_1784 0.64 -0.5 1,879,185 - B158DRAFT_1784 0.68 +2.0 1,879,215 + B158DRAFT_1784 0.73 -1.6 1,879,223 - B158DRAFT_1784 0.74 -1.4 1,879,223 - B158DRAFT_1784 0.74 -0.7 1,879,223 - B158DRAFT_1784 0.74 +0.2 1,879,256 + B158DRAFT_1784 0.80 -0.4 1,879,302 + B158DRAFT_1784 0.87 -0.6 1,879,310 - B158DRAFT_1784 0.89 -0.8 1,879,331 - -1.1 1,879,360 - -0.4 1,879,486 + B158DRAFT_1785 0.27 -1.1 1,879,494 - B158DRAFT_1785 0.31 +0.0 1,879,494 - B158DRAFT_1785 0.31 -0.6 1,879,520 + B158DRAFT_1785 0.41 -1.2 1,879,566 - B158DRAFT_1785 0.59 -0.3 1,879,652 - -1.3 1,879,652 - -0.3 1,879,663 - -0.1 1,879,694 + -0.1 1,879,694 + -0.5 1,879,736 - -0.5 1,879,858 + -0.5 1,879,899 + -0.8 1,879,899 + -0.2 1,879,899 + -0.2 1,879,907 - -0.2 1,879,907 - -0.1 1,879,907 - +0.2 1,879,907 - -1.6 1,880,171 - B158DRAFT_1786 0.22 -0.3 1,880,208 + B158DRAFT_1786 0.24 -0.2 1,880,216 - B158DRAFT_1786 0.24 -0.9 1,880,243 + B158DRAFT_1786 0.25 -0.1 1,880,301 + B158DRAFT_1786 0.28 -0.5 1,880,329 + B158DRAFT_1786 0.29 -0.9 1,880,432 - B158DRAFT_1786 0.34 +0.3 1,880,443 - B158DRAFT_1786 0.34 -0.2 1,880,443 - B158DRAFT_1786 0.34 -0.2 1,880,460 + B158DRAFT_1786 0.35 -0.7 1,880,600 - B158DRAFT_1786 0.42 -0.1 1,880,633 - B158DRAFT_1786 0.43 -0.3 1,880,648 + B158DRAFT_1786 0.44 +0.2 1,880,648 + B158DRAFT_1786 0.44 -0.8 1,880,656 - B158DRAFT_1786 0.44 +0.3 1,880,656 - B158DRAFT_1786 0.44 -0.7 1,880,656 - B158DRAFT_1786 0.44 -0.7 1,880,656 - B158DRAFT_1786 0.44 -0.5 1,880,668 - B158DRAFT_1786 0.45 -0.1 1,880,790 + B158DRAFT_1786 0.50 +0.3 1,880,790 + B158DRAFT_1786 0.50 -0.0 1,880,790 + B158DRAFT_1786 0.50 -0.5 1,880,798 - B158DRAFT_1786 0.51 -0.7 1,880,798 - B158DRAFT_1786 0.51 -0.7 1,880,803 - B158DRAFT_1786 0.51 -0.6 1,880,803 - B158DRAFT_1786 0.51 -1.2 1,880,824 + B158DRAFT_1786 0.52 -0.6 1,880,832 - B158DRAFT_1786 0.52 -0.9 1,880,930 + B158DRAFT_1786 0.57 -0.4 1,880,938 - B158DRAFT_1786 0.57 -0.6 1,880,938 - B158DRAFT_1786 0.57 -0.1 1,880,938 - B158DRAFT_1786 0.57 -1.0 1,880,938 - B158DRAFT_1786 0.57 +0.3 1,880,938 - B158DRAFT_1786 0.57 -0.4 1,880,949 + B158DRAFT_1786 0.57 -0.6 1,880,949 + B158DRAFT_1786 0.57 -0.6 1,880,949 + B158DRAFT_1786 0.57 -0.1 1,880,957 - B158DRAFT_1786 0.58 -0.7 1,880,975 + B158DRAFT_1786 0.59 -0.3 1,880,985 - B158DRAFT_1786 0.59 -0.8 1,880,990 - B158DRAFT_1786 0.59 -1.1 1,880,992 + B158DRAFT_1786 0.59 -0.4 1,881,010 - B158DRAFT_1786 0.60 -0.7 1,881,010 - B158DRAFT_1786 0.60 -0.6 1,881,011 - B158DRAFT_1786 0.60 -0.4 1,881,064 + B158DRAFT_1786 0.63 -0.7 1,881,072 - B158DRAFT_1786 0.63 -0.3 1,881,077 - B158DRAFT_1786 0.63 -0.1 1,881,084 + B158DRAFT_1786 0.64 -0.6 1,881,084 + B158DRAFT_1786 0.64 -0.1 1,881,084 + B158DRAFT_1786 0.64 -0.4 1,881,084 + B158DRAFT_1786 0.64 -0.2 1,881,087 - B158DRAFT_1786 0.64 -0.5 1,881,092 - B158DRAFT_1786 0.64 -0.7 1,881,092 - B158DRAFT_1786 0.64 -0.6 1,881,102 - B158DRAFT_1786 0.64 -0.9 1,881,136 + B158DRAFT_1786 0.66 -1.2 1,881,181 - B158DRAFT_1786 0.68 +0.3 1,881,255 + B158DRAFT_1786 0.71 -0.6 1,881,268 - B158DRAFT_1786 0.72 +0.0 1,881,293 + B158DRAFT_1786 0.73 -0.7 1,881,299 + B158DRAFT_1786 0.73 -1.0 1,881,302 - B158DRAFT_1786 0.73 -0.4 1,881,312 - B158DRAFT_1786 0.74 -0.7 1,881,322 - B158DRAFT_1786 0.74 -0.8 1,881,322 - B158DRAFT_1786 0.74 -0.9 1,881,336 + B158DRAFT_1786 0.75 -0.4 1,881,344 - B158DRAFT_1786 0.75 -0.8 1,881,395 - B158DRAFT_1786 0.78 -0.3 1,881,411 + B158DRAFT_1786 0.78 -1.1 1,881,423 + B158DRAFT_1786 0.79 -1.0 1,881,478 + B158DRAFT_1786 0.82 +0.0 1,881,587 - B158DRAFT_1786 0.86 -0.5 1,881,587 - B158DRAFT_1786 0.86 -0.5 1,881,623 + B158DRAFT_1786 0.88 -0.2 1,881,666 + -0.5 1,881,690 + -0.4 1,881,698 - -1.2 1,881,719 + -0.9 1,881,727 - -0.5 1,881,727 - -0.8 1,881,747 + -1.1 1,881,770 - -0.4 1,881,778 - -0.8 1,881,883 + +0.4 1,881,912 + -1.1 1,881,966 - -0.4 1,881,968 + -0.5 1,881,968 + -0.4 1,881,976 - -2.0 1,882,042 - -1.2 1,882,076 + -0.6 1,882,114 + -1.3 1,882,149 + -0.6 1,882,210 - -0.3 1,882,234 + -0.3 1,882,234 + +0.0 1,882,234 + +0.1 1,882,234 + +0.3 1,882,234 + -0.2 1,882,234 + -0.3 1,882,234 + -1.0 1,882,234 + -0.3 1,882,234 + +0.1 1,882,234 + -0.0 1,882,234 + +0.0 1,882,234 + +0.3 1,882,234 + -1.5 1,882,234 + +0.2 1,882,234 + +0.1 1,882,242 - -0.5 1,882,242 - -0.1 1,882,242 - -0.2 1,882,242 - +0.5 1,882,242 - -0.6 1,882,242 - -0.2 1,882,242 - -0.4 1,882,242 - -0.1 1,882,242 - -0.6 1,882,242 - +0.2 1,882,242 - -0.1 1,882,242 - +0.5 1,882,242 - +0.3 1,882,242 - -0.2 1,882,242 - +0.9 1,882,242 - -2.5 1,882,242 - -0.3 1,882,242 - -1.1 1,882,242 - +0.3 1,882,242 - +0.2 1,882,268 + -1.2 1,882,302 + +0.3 1,882,302 + +0.3 1,882,302 + +1.4 1,882,308 + -0.1 1,882,310 - +0.6 1,882,310 - -0.6 1,882,310 - -0.7 1,882,310 - -0.6 1,882,310 - -0.8 1,882,323 - +0.2 1,882,331 + +0.0 1,882,339 + +0.0 1,882,348 + -0.0 1,882,357 - -1.3 1,882,461 - B158DRAFT_1787 0.16 +0.9 1,882,627 - B158DRAFT_1787 0.37 -0.4 1,882,656 + B158DRAFT_1787 0.41 -0.1 1,882,718 + B158DRAFT_1787 0.49 -0.5 1,882,754 + B158DRAFT_1787 0.54 -0.1 1,882,754 + B158DRAFT_1787 0.54 +0.3 1,882,754 + B158DRAFT_1787 0.54 +0.0 1,882,762 - B158DRAFT_1787 0.55 +0.2 1,882,762 - B158DRAFT_1787 0.55 +0.1 1,882,793 + B158DRAFT_1787 0.59 +0.0
Or see this region's nucleotide sequence