Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1391

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1389 and B158DRAFT_1390 are separated by 213 nucleotidesB158DRAFT_1390 and B158DRAFT_1391 are separated by 10 nucleotidesB158DRAFT_1391 and B158DRAFT_1392 are separated by 9 nucleotidesB158DRAFT_1392 and B158DRAFT_1393 are separated by 5 nucleotidesB158DRAFT_1393 and B158DRAFT_1394 are separated by 137 nucleotides B158DRAFT_1389: B158DRAFT_1389 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 1,434,630 to 1,435,286 _1389 B158DRAFT_1390: B158DRAFT_1390 - sulfur relay protein, TusE/DsrC/DsvC family, at 1,435,500 to 1,435,826 _1390 B158DRAFT_1391: B158DRAFT_1391 - sulfur relay protein TusB/DsrH, at 1,435,837 to 1,436,109 _1391 B158DRAFT_1392: B158DRAFT_1392 - sulfur relay protein TusC/DsrF, at 1,436,119 to 1,436,484 _1392 B158DRAFT_1393: B158DRAFT_1393 - sulfur relay protein TusD/DsrE, at 1,436,490 to 1,436,882 _1393 B158DRAFT_1394: B158DRAFT_1394 - Peptidase family M49., at 1,437,020 to 1,438,753 _1394 Position (kb) 1435 1436 1437Strain fitness (log2 ratio) -3 -2 -1 0 1at 1434.905 kb on - strand, within B158DRAFT_1389at 1434.915 kb on - strand, within B158DRAFT_1389at 1435.001 kb on + strand, within B158DRAFT_1389at 1435.009 kb on + strand, within B158DRAFT_1389at 1435.049 kb on - strand, within B158DRAFT_1389at 1435.078 kb on + strand, within B158DRAFT_1389at 1435.078 kb on + strand, within B158DRAFT_1389at 1435.086 kb on - strand, within B158DRAFT_1389at 1435.098 kb on + strand, within B158DRAFT_1389at 1435.114 kb on - strand, within B158DRAFT_1389at 1435.114 kb on - strand, within B158DRAFT_1389at 1435.125 kb on + strand, within B158DRAFT_1389at 1435.168 kb on + strand, within B158DRAFT_1389at 1435.233 kb on + strandat 1435.288 kb on + strandat 1435.385 kb on + strandat 1435.385 kb on + strandat 1435.393 kb on - strandat 1435.393 kb on - strandat 1435.410 kb on + strandat 1435.499 kb on + strandat 1436.117 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.930 kb on - strandat 1436.947 kb on - strandat 1437.006 kb on + strandat 1437.022 kb on + strandat 1437.047 kb on - strandat 1437.047 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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1,434,905 - B158DRAFT_1389 0.42 -2.4
1,434,915 - B158DRAFT_1389 0.43 -2.9
1,435,001 + B158DRAFT_1389 0.56 -2.0
1,435,009 + B158DRAFT_1389 0.58 -3.3
1,435,049 - B158DRAFT_1389 0.64 -2.6
1,435,078 + B158DRAFT_1389 0.68 -1.7
1,435,078 + B158DRAFT_1389 0.68 -1.5
1,435,086 - B158DRAFT_1389 0.69 -3.3
1,435,098 + B158DRAFT_1389 0.71 -1.9
1,435,114 - B158DRAFT_1389 0.74 -1.1
1,435,114 - B158DRAFT_1389 0.74 -1.5
1,435,125 + B158DRAFT_1389 0.75 -3.4
1,435,168 + B158DRAFT_1389 0.82 -2.9
1,435,233 + -0.5
1,435,288 + -1.7
1,435,385 + -0.8
1,435,385 + -0.9
1,435,393 - -0.1
1,435,393 - -0.5
1,435,410 + +0.1
1,435,499 + -0.8
1,436,117 - +0.1
1,436,915 - -0.8
1,436,915 - -0.5
1,436,915 - -0.1
1,436,915 - -1.5
1,436,915 - +0.5
1,436,930 - -0.3
1,436,947 - -0.4
1,437,006 + -0.5
1,437,022 + -0.6
1,437,047 - -0.2
1,437,047 - -0.1

Or see this region's nucleotide sequence