Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1385 and B158DRAFT_1386 are separated by 722 nucleotides B158DRAFT_1386 and B158DRAFT_1387 are separated by 81 nucleotides B158DRAFT_1387 and B158DRAFT_1388 are separated by 105 nucleotides B158DRAFT_1388 and B158DRAFT_1389 are separated by 61 nucleotides
B158DRAFT_1385: B158DRAFT_1385 - Prephenate dehydratase, at 1,430,061 to 1,431,263
_1385
B158DRAFT_1386: B158DRAFT_1386 - phage shock protein C (PspC) family protein, at 1,431,986 to 1,432,165
_1386
B158DRAFT_1387: B158DRAFT_1387 - gamma-glutamyltranspeptidase, at 1,432,247 to 1,433,989
_1387
B158DRAFT_1388: B158DRAFT_1388 - Peroxiredoxin, at 1,434,095 to 1,434,568
_1388
B158DRAFT_1389: B158DRAFT_1389 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 1,434,630 to 1,435,286
_1389
Position (kb) 1432
1433
1434 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1431.283 kb on - strand at 1431.384 kb on + strand at 1431.392 kb on - strand at 1431.459 kb on - strand at 1431.513 kb on + strand at 1431.620 kb on + strand at 1431.784 kb on + strand at 1431.843 kb on + strand at 1431.846 kb on - strand at 1431.851 kb on + strand at 1431.859 kb on - strand at 1431.951 kb on + strand at 1432.248 kb on - strand at 1432.465 kb on - strand, within B158DRAFT_1387 at 1432.478 kb on + strand, within B158DRAFT_1387 at 1432.509 kb on - strand, within B158DRAFT_1387 at 1432.578 kb on + strand, within B158DRAFT_1387 at 1432.586 kb on - strand, within B158DRAFT_1387 at 1432.636 kb on + strand, within B158DRAFT_1387 at 1432.649 kb on + strand, within B158DRAFT_1387 at 1432.675 kb on + strand, within B158DRAFT_1387 at 1432.684 kb on + strand, within B158DRAFT_1387 at 1432.685 kb on + strand, within B158DRAFT_1387 at 1432.693 kb on - strand, within B158DRAFT_1387 at 1432.695 kb on + strand, within B158DRAFT_1387 at 1432.730 kb on + strand, within B158DRAFT_1387 at 1432.730 kb on + strand, within B158DRAFT_1387 at 1432.738 kb on - strand, within B158DRAFT_1387 at 1432.757 kb on + strand, within B158DRAFT_1387 at 1432.796 kb on + strand, within B158DRAFT_1387 at 1432.848 kb on - strand, within B158DRAFT_1387 at 1432.869 kb on + strand, within B158DRAFT_1387 at 1432.878 kb on + strand, within B158DRAFT_1387 at 1432.886 kb on - strand, within B158DRAFT_1387 at 1432.886 kb on - strand, within B158DRAFT_1387 at 1433.036 kb on + strand, within B158DRAFT_1387 at 1433.036 kb on + strand, within B158DRAFT_1387 at 1433.036 kb on + strand, within B158DRAFT_1387 at 1433.051 kb on - strand, within B158DRAFT_1387 at 1433.089 kb on - strand, within B158DRAFT_1387 at 1433.099 kb on + strand, within B158DRAFT_1387 at 1433.099 kb on + strand, within B158DRAFT_1387 at 1433.107 kb on - strand, within B158DRAFT_1387 at 1433.129 kb on + strand, within B158DRAFT_1387 at 1433.129 kb on + strand, within B158DRAFT_1387 at 1433.129 kb on + strand, within B158DRAFT_1387 at 1433.129 kb on + strand, within B158DRAFT_1387 at 1433.129 kb on + strand, within B158DRAFT_1387 at 1433.129 kb on + strand, within B158DRAFT_1387 at 1433.129 kb on + strand, within B158DRAFT_1387 at 1433.130 kb on + strand, within B158DRAFT_1387 at 1433.130 kb on + strand, within B158DRAFT_1387 at 1433.137 kb on - strand, within B158DRAFT_1387 at 1433.138 kb on - strand, within B158DRAFT_1387 at 1433.158 kb on + strand, within B158DRAFT_1387 at 1433.166 kb on - strand, within B158DRAFT_1387 at 1433.166 kb on - strand, within B158DRAFT_1387 at 1433.167 kb on + strand, within B158DRAFT_1387 at 1433.275 kb on - strand, within B158DRAFT_1387 at 1433.344 kb on - strand, within B158DRAFT_1387 at 1433.383 kb on + strand, within B158DRAFT_1387 at 1433.388 kb on + strand, within B158DRAFT_1387 at 1433.396 kb on - strand, within B158DRAFT_1387 at 1433.396 kb on - strand, within B158DRAFT_1387 at 1433.462 kb on + strand, within B158DRAFT_1387 at 1433.462 kb on + strand, within B158DRAFT_1387 at 1433.465 kb on - strand, within B158DRAFT_1387 at 1433.518 kb on + strand, within B158DRAFT_1387 at 1433.518 kb on + strand, within B158DRAFT_1387 at 1433.526 kb on - strand, within B158DRAFT_1387 at 1433.526 kb on - strand, within B158DRAFT_1387 at 1433.526 kb on - strand, within B158DRAFT_1387 at 1433.550 kb on + strand, within B158DRAFT_1387 at 1433.653 kb on + strand, within B158DRAFT_1387 at 1433.653 kb on + strand, within B158DRAFT_1387 at 1433.653 kb on + strand, within B158DRAFT_1387 at 1433.653 kb on + strand, within B158DRAFT_1387 at 1433.653 kb on + strand, within B158DRAFT_1387 at 1433.653 kb on + strand, within B158DRAFT_1387 at 1433.661 kb on - strand, within B158DRAFT_1387 at 1433.695 kb on - strand, within B158DRAFT_1387 at 1433.749 kb on - strand, within B158DRAFT_1387 at 1433.828 kb on - strand at 1433.863 kb on + strand at 1433.876 kb on + strand at 1433.972 kb on - strand at 1434.019 kb on + strand at 1434.026 kb on + strand at 1434.083 kb on - strand at 1434.085 kb on - strand at 1434.153 kb on + strand, within B158DRAFT_1388 at 1434.153 kb on + strand, within B158DRAFT_1388 at 1434.232 kb on + strand, within B158DRAFT_1388 at 1434.235 kb on + strand, within B158DRAFT_1388 at 1434.235 kb on + strand, within B158DRAFT_1388 at 1434.235 kb on + strand, within B158DRAFT_1388 at 1434.240 kb on - strand, within B158DRAFT_1388 at 1434.240 kb on - strand, within B158DRAFT_1388 at 1434.247 kb on + strand, within B158DRAFT_1388 at 1434.349 kb on + strand, within B158DRAFT_1388 at 1434.512 kb on - strand, within B158DRAFT_1388 at 1434.570 kb on - strand at 1434.704 kb on + strand, within B158DRAFT_1389 at 1434.731 kb on + strand, within B158DRAFT_1389 at 1434.815 kb on + strand, within B158DRAFT_1389 at 1434.905 kb on - strand, within B158DRAFT_1389 at 1434.915 kb on - strand, within B158DRAFT_1389
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml remove 1,431,283 - +0.1 1,431,384 + -0.4 1,431,392 - +0.1 1,431,459 - -0.1 1,431,513 + +0.2 1,431,620 + -0.0 1,431,784 + +0.5 1,431,843 + -0.6 1,431,846 - -0.4 1,431,851 + -0.2 1,431,859 - -0.6 1,431,951 + +0.5 1,432,248 - +0.2 1,432,465 - B158DRAFT_1387 0.13 -0.2 1,432,478 + B158DRAFT_1387 0.13 +0.5 1,432,509 - B158DRAFT_1387 0.15 +0.5 1,432,578 + B158DRAFT_1387 0.19 +0.0 1,432,586 - B158DRAFT_1387 0.19 -0.2 1,432,636 + B158DRAFT_1387 0.22 -0.6 1,432,649 + B158DRAFT_1387 0.23 -0.8 1,432,675 + B158DRAFT_1387 0.25 -0.8 1,432,684 + B158DRAFT_1387 0.25 -0.3 1,432,685 + B158DRAFT_1387 0.25 +0.5 1,432,693 - B158DRAFT_1387 0.26 -0.0 1,432,695 + B158DRAFT_1387 0.26 -0.5 1,432,730 + B158DRAFT_1387 0.28 +0.1 1,432,730 + B158DRAFT_1387 0.28 -0.1 1,432,738 - B158DRAFT_1387 0.28 +0.1 1,432,757 + B158DRAFT_1387 0.29 +0.4 1,432,796 + B158DRAFT_1387 0.31 +0.1 1,432,848 - B158DRAFT_1387 0.34 -0.0 1,432,869 + B158DRAFT_1387 0.36 +0.0 1,432,878 + B158DRAFT_1387 0.36 -0.0 1,432,886 - B158DRAFT_1387 0.37 -0.7 1,432,886 - B158DRAFT_1387 0.37 -1.4 1,433,036 + B158DRAFT_1387 0.45 -0.1 1,433,036 + B158DRAFT_1387 0.45 +0.2 1,433,036 + B158DRAFT_1387 0.45 -0.4 1,433,051 - B158DRAFT_1387 0.46 -0.7 1,433,089 - B158DRAFT_1387 0.48 -0.3 1,433,099 + B158DRAFT_1387 0.49 +0.1 1,433,099 + B158DRAFT_1387 0.49 -0.3 1,433,107 - B158DRAFT_1387 0.49 -0.4 1,433,129 + B158DRAFT_1387 0.51 -0.3 1,433,129 + B158DRAFT_1387 0.51 +0.1 1,433,129 + B158DRAFT_1387 0.51 -0.4 1,433,129 + B158DRAFT_1387 0.51 -0.3 1,433,129 + B158DRAFT_1387 0.51 -0.6 1,433,129 + B158DRAFT_1387 0.51 +0.1 1,433,129 + B158DRAFT_1387 0.51 +0.7 1,433,130 + B158DRAFT_1387 0.51 -1.4 1,433,130 + B158DRAFT_1387 0.51 -0.6 1,433,137 - B158DRAFT_1387 0.51 +0.1 1,433,138 - B158DRAFT_1387 0.51 -0.2 1,433,158 + B158DRAFT_1387 0.52 +0.0 1,433,166 - B158DRAFT_1387 0.53 -0.2 1,433,166 - B158DRAFT_1387 0.53 -0.6 1,433,167 + B158DRAFT_1387 0.53 -0.1 1,433,275 - B158DRAFT_1387 0.59 +0.6 1,433,344 - B158DRAFT_1387 0.63 -0.7 1,433,383 + B158DRAFT_1387 0.65 -0.4 1,433,388 + B158DRAFT_1387 0.65 +0.4 1,433,396 - B158DRAFT_1387 0.66 -0.1 1,433,396 - B158DRAFT_1387 0.66 +0.3 1,433,462 + B158DRAFT_1387 0.70 -0.2 1,433,462 + B158DRAFT_1387 0.70 -0.1 1,433,465 - B158DRAFT_1387 0.70 +1.1 1,433,518 + B158DRAFT_1387 0.73 -0.6 1,433,518 + B158DRAFT_1387 0.73 +0.3 1,433,526 - B158DRAFT_1387 0.73 -1.0 1,433,526 - B158DRAFT_1387 0.73 +0.2 1,433,526 - B158DRAFT_1387 0.73 -0.1 1,433,550 + B158DRAFT_1387 0.75 -1.1 1,433,653 + B158DRAFT_1387 0.81 +0.4 1,433,653 + B158DRAFT_1387 0.81 +0.5 1,433,653 + B158DRAFT_1387 0.81 -0.7 1,433,653 + B158DRAFT_1387 0.81 -0.7 1,433,653 + B158DRAFT_1387 0.81 -0.3 1,433,653 + B158DRAFT_1387 0.81 -0.0 1,433,661 - B158DRAFT_1387 0.81 +0.5 1,433,695 - B158DRAFT_1387 0.83 -0.2 1,433,749 - B158DRAFT_1387 0.86 -0.2 1,433,828 - -0.2 1,433,863 + -0.4 1,433,876 + +0.0 1,433,972 - +0.0 1,434,019 + -0.6 1,434,026 + -0.3 1,434,083 - -0.3 1,434,085 - -0.6 1,434,153 + B158DRAFT_1388 0.12 +0.7 1,434,153 + B158DRAFT_1388 0.12 -0.3 1,434,232 + B158DRAFT_1388 0.29 -1.0 1,434,235 + B158DRAFT_1388 0.30 -0.3 1,434,235 + B158DRAFT_1388 0.30 -0.1 1,434,235 + B158DRAFT_1388 0.30 +0.0 1,434,240 - B158DRAFT_1388 0.31 +0.0 1,434,240 - B158DRAFT_1388 0.31 +0.7 1,434,247 + B158DRAFT_1388 0.32 +0.1 1,434,349 + B158DRAFT_1388 0.54 -0.3 1,434,512 - B158DRAFT_1388 0.88 -0.0 1,434,570 - -0.2 1,434,704 + B158DRAFT_1389 0.11 -1.0 1,434,731 + B158DRAFT_1389 0.15 -1.6 1,434,815 + B158DRAFT_1389 0.28 -3.6 1,434,905 - B158DRAFT_1389 0.42 -2.4 1,434,915 - B158DRAFT_1389 0.43 -2.9
Or see this region's nucleotide sequence