Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1338

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1337 and B158DRAFT_1338 are separated by 35 nucleotidesB158DRAFT_1338 and B158DRAFT_1339 are separated by 141 nucleotides B158DRAFT_1337: B158DRAFT_1337 - Imidazolonepropionase and related amidohydrolases, at 1,377,945 to 1,379,492 _1337 B158DRAFT_1338: B158DRAFT_1338 - TIGR01777 family protein, at 1,379,528 to 1,380,424 _1338 B158DRAFT_1339: B158DRAFT_1339 - L-serine dehydratase, iron-sulfur-dependent, single chain form, at 1,380,566 to 1,381,939 _1339 Position (kb) 1379 1380 1381Strain fitness (log2 ratio) -2 -1 0 1at 1378.561 kb on - strand, within B158DRAFT_1337at 1378.565 kb on + strand, within B158DRAFT_1337at 1378.576 kb on + strand, within B158DRAFT_1337at 1378.635 kb on - strand, within B158DRAFT_1337at 1378.652 kb on + strand, within B158DRAFT_1337at 1378.671 kb on + strand, within B158DRAFT_1337at 1378.686 kb on - strand, within B158DRAFT_1337at 1378.710 kb on + strand, within B158DRAFT_1337at 1378.785 kb on + strand, within B158DRAFT_1337at 1378.803 kb on - strand, within B158DRAFT_1337at 1379.049 kb on - strand, within B158DRAFT_1337at 1379.059 kb on - strand, within B158DRAFT_1337at 1379.059 kb on - strand, within B158DRAFT_1337at 1379.102 kb on + strand, within B158DRAFT_1337at 1379.149 kb on + strand, within B158DRAFT_1337at 1379.200 kb on + strand, within B158DRAFT_1337at 1379.208 kb on - strand, within B158DRAFT_1337at 1379.218 kb on - strand, within B158DRAFT_1337at 1379.334 kb on + strand, within B158DRAFT_1337at 1379.342 kb on - strandat 1379.342 kb on - strandat 1379.344 kb on + strandat 1379.349 kb on + strandat 1379.349 kb on + strandat 1379.349 kb on + strandat 1379.349 kb on + strandat 1379.351 kb on + strandat 1379.357 kb on - strandat 1379.357 kb on - strandat 1379.357 kb on - strandat 1379.395 kb on + strandat 1379.433 kb on - strandat 1379.436 kb on + strandat 1379.460 kb on - strandat 1379.506 kb on + strandat 1379.519 kb on - strandat 1379.544 kb on + strandat 1379.562 kb on - strandat 1379.580 kb on + strandat 1379.590 kb on + strandat 1379.658 kb on - strand, within B158DRAFT_1338at 1379.669 kb on + strand, within B158DRAFT_1338at 1379.669 kb on + strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.677 kb on - strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.696 kb on + strand, within B158DRAFT_1338at 1379.704 kb on - strand, within B158DRAFT_1338at 1379.704 kb on - strand, within B158DRAFT_1338at 1379.778 kb on + strand, within B158DRAFT_1338at 1379.778 kb on + strand, within B158DRAFT_1338at 1379.786 kb on - strand, within B158DRAFT_1338at 1379.786 kb on - strand, within B158DRAFT_1338at 1379.803 kb on - strand, within B158DRAFT_1338at 1379.853 kb on - strand, within B158DRAFT_1338at 1379.893 kb on - strand, within B158DRAFT_1338at 1379.919 kb on + strand, within B158DRAFT_1338at 1379.919 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.923 kb on + strand, within B158DRAFT_1338at 1379.931 kb on - strand, within B158DRAFT_1338at 1379.931 kb on - strand, within B158DRAFT_1338at 1379.958 kb on + strand, within B158DRAFT_1338at 1379.964 kb on - strand, within B158DRAFT_1338at 1380.029 kb on + strand, within B158DRAFT_1338at 1380.104 kb on + strand, within B158DRAFT_1338at 1380.104 kb on + strand, within B158DRAFT_1338at 1380.104 kb on + strand, within B158DRAFT_1338at 1380.112 kb on - strand, within B158DRAFT_1338at 1380.112 kb on - strand, within B158DRAFT_1338at 1380.112 kb on - strand, within B158DRAFT_1338at 1380.145 kb on + strand, within B158DRAFT_1338at 1380.160 kb on - strand, within B158DRAFT_1338at 1380.165 kb on - strand, within B158DRAFT_1338at 1380.193 kb on + strand, within B158DRAFT_1338at 1380.198 kb on + strand, within B158DRAFT_1338at 1380.198 kb on + strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.206 kb on - strand, within B158DRAFT_1338at 1380.217 kb on + strand, within B158DRAFT_1338at 1380.287 kb on - strand, within B158DRAFT_1338at 1380.322 kb on + strand, within B158DRAFT_1338at 1380.324 kb on + strand, within B158DRAFT_1338at 1380.458 kb on - strandat 1380.474 kb on - strandat 1380.526 kb on + strandat 1380.526 kb on + strandat 1380.526 kb on + strandat 1380.526 kb on + strandat 1380.526 kb on + strandat 1380.534 kb on - strandat 1380.534 kb on - strandat 1380.534 kb on - strandat 1380.534 kb on - strandat 1380.578 kb on + strandat 1380.624 kb on + strandat 1380.660 kb on + strandat 1380.685 kb on + strandat 1380.791 kb on + strand, within B158DRAFT_1339at 1380.811 kb on - strand, within B158DRAFT_1339at 1380.811 kb on - strand, within B158DRAFT_1339at 1380.818 kb on + strand, within B158DRAFT_1339at 1380.841 kb on + strand, within B158DRAFT_1339at 1380.841 kb on + strand, within B158DRAFT_1339at 1380.841 kb on + strand, within B158DRAFT_1339at 1380.841 kb on + strand, within B158DRAFT_1339at 1380.849 kb on - strand, within B158DRAFT_1339at 1380.849 kb on - strand, within B158DRAFT_1339at 1380.905 kb on - strand, within B158DRAFT_1339at 1380.930 kb on - strand, within B158DRAFT_1339at 1380.978 kb on + strand, within B158DRAFT_1339at 1381.073 kb on + strand, within B158DRAFT_1339at 1381.135 kb on + strand, within B158DRAFT_1339at 1381.135 kb on + strand, within B158DRAFT_1339at 1381.135 kb on + strand, within B158DRAFT_1339at 1381.135 kb on + strand, within B158DRAFT_1339at 1381.135 kb on + strand, within B158DRAFT_1339at 1381.135 kb on + strand, within B158DRAFT_1339at 1381.135 kb on + strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.143 kb on - strand, within B158DRAFT_1339at 1381.153 kb on - strand, within B158DRAFT_1339at 1381.222 kb on + strand, within B158DRAFT_1339at 1381.282 kb on - strand, within B158DRAFT_1339at 1381.402 kb on - strand, within B158DRAFT_1339at 1381.410 kb on + strand, within B158DRAFT_1339

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
remove
1,378,561 - B158DRAFT_1337 0.40 -0.2
1,378,565 + B158DRAFT_1337 0.40 -0.4
1,378,576 + B158DRAFT_1337 0.41 -0.0
1,378,635 - B158DRAFT_1337 0.45 -0.6
1,378,652 + B158DRAFT_1337 0.46 -0.1
1,378,671 + B158DRAFT_1337 0.47 +0.6
1,378,686 - B158DRAFT_1337 0.48 +0.3
1,378,710 + B158DRAFT_1337 0.49 -0.8
1,378,785 + B158DRAFT_1337 0.54 -0.3
1,378,803 - B158DRAFT_1337 0.55 -0.1
1,379,049 - B158DRAFT_1337 0.71 -0.7
1,379,059 - B158DRAFT_1337 0.72 -0.6
1,379,059 - B158DRAFT_1337 0.72 +0.3
1,379,102 + B158DRAFT_1337 0.75 -1.5
1,379,149 + B158DRAFT_1337 0.78 -0.6
1,379,200 + B158DRAFT_1337 0.81 +0.2
1,379,208 - B158DRAFT_1337 0.82 -0.9
1,379,218 - B158DRAFT_1337 0.82 -0.6
1,379,334 + B158DRAFT_1337 0.90 +0.2
1,379,342 - -0.2
1,379,342 - -0.3
1,379,344 + -0.2
1,379,349 + -0.8
1,379,349 + +0.1
1,379,349 + -0.4
1,379,349 + -0.2
1,379,351 + -0.2
1,379,357 - -0.0
1,379,357 - -0.0
1,379,357 - -2.0
1,379,395 + -0.3
1,379,433 - -0.5
1,379,436 + -0.2
1,379,460 - +0.2
1,379,506 + +0.4
1,379,519 - +0.4
1,379,544 + -0.6
1,379,562 - -0.2
1,379,580 + +0.5
1,379,590 + -0.2
1,379,658 - B158DRAFT_1338 0.14 +1.4
1,379,669 + B158DRAFT_1338 0.16 +0.1
1,379,669 + B158DRAFT_1338 0.16 -0.1
1,379,677 - B158DRAFT_1338 0.17 -1.0
1,379,677 - B158DRAFT_1338 0.17 -0.2
1,379,677 - B158DRAFT_1338 0.17 +0.0
1,379,677 - B158DRAFT_1338 0.17 +0.8
1,379,677 - B158DRAFT_1338 0.17 -0.4
1,379,696 + B158DRAFT_1338 0.19 -1.0
1,379,696 + B158DRAFT_1338 0.19 -0.2
1,379,696 + B158DRAFT_1338 0.19 +0.0
1,379,696 + B158DRAFT_1338 0.19 -0.0
1,379,704 - B158DRAFT_1338 0.20 -0.5
1,379,704 - B158DRAFT_1338 0.20 -0.6
1,379,778 + B158DRAFT_1338 0.28 -0.4
1,379,778 + B158DRAFT_1338 0.28 -0.3
1,379,786 - B158DRAFT_1338 0.29 -0.6
1,379,786 - B158DRAFT_1338 0.29 +0.8
1,379,803 - B158DRAFT_1338 0.31 -0.3
1,379,853 - B158DRAFT_1338 0.36 +0.1
1,379,893 - B158DRAFT_1338 0.41 +0.0
1,379,919 + B158DRAFT_1338 0.44 -0.6
1,379,919 + B158DRAFT_1338 0.44 -0.3
1,379,923 + B158DRAFT_1338 0.44 -0.3
1,379,923 + B158DRAFT_1338 0.44 +0.4
1,379,923 + B158DRAFT_1338 0.44 +0.3
1,379,923 + B158DRAFT_1338 0.44 -0.3
1,379,931 - B158DRAFT_1338 0.45 -0.0
1,379,931 - B158DRAFT_1338 0.45 -0.6
1,379,958 + B158DRAFT_1338 0.48 +0.6
1,379,964 - B158DRAFT_1338 0.49 +0.5
1,380,029 + B158DRAFT_1338 0.56 -0.0
1,380,104 + B158DRAFT_1338 0.64 +0.2
1,380,104 + B158DRAFT_1338 0.64 -0.7
1,380,104 + B158DRAFT_1338 0.64 +0.3
1,380,112 - B158DRAFT_1338 0.65 -1.0
1,380,112 - B158DRAFT_1338 0.65 +0.8
1,380,112 - B158DRAFT_1338 0.65 -0.9
1,380,145 + B158DRAFT_1338 0.69 -0.3
1,380,160 - B158DRAFT_1338 0.70 -0.3
1,380,165 - B158DRAFT_1338 0.71 +0.3
1,380,193 + B158DRAFT_1338 0.74 -0.0
1,380,198 + B158DRAFT_1338 0.75 -0.9
1,380,198 + B158DRAFT_1338 0.75 -0.3
1,380,206 - B158DRAFT_1338 0.76 -0.4
1,380,206 - B158DRAFT_1338 0.76 +1.0
1,380,206 - B158DRAFT_1338 0.76 -1.6
1,380,206 - B158DRAFT_1338 0.76 -1.5
1,380,217 + B158DRAFT_1338 0.77 -0.2
1,380,287 - B158DRAFT_1338 0.85 -0.3
1,380,322 + B158DRAFT_1338 0.89 -0.2
1,380,324 + B158DRAFT_1338 0.89 -0.3
1,380,458 - +0.1
1,380,474 - +0.3
1,380,526 + -0.3
1,380,526 + +0.0
1,380,526 + -0.4
1,380,526 + -0.0
1,380,526 + -0.3
1,380,534 - -0.1
1,380,534 - -0.0
1,380,534 - -0.8
1,380,534 - +0.1
1,380,578 + +0.1
1,380,624 + -0.6
1,380,660 + -0.7
1,380,685 + -1.2
1,380,791 + B158DRAFT_1339 0.16 -0.7
1,380,811 - B158DRAFT_1339 0.18 -0.6
1,380,811 - B158DRAFT_1339 0.18 -0.5
1,380,818 + B158DRAFT_1339 0.18 -0.5
1,380,841 + B158DRAFT_1339 0.20 -0.8
1,380,841 + B158DRAFT_1339 0.20 -0.8
1,380,841 + B158DRAFT_1339 0.20 +1.1
1,380,841 + B158DRAFT_1339 0.20 -0.9
1,380,849 - B158DRAFT_1339 0.21 -0.8
1,380,849 - B158DRAFT_1339 0.21 -0.7
1,380,905 - B158DRAFT_1339 0.25 -0.3
1,380,930 - B158DRAFT_1339 0.26 -0.7
1,380,978 + B158DRAFT_1339 0.30 -1.0
1,381,073 + B158DRAFT_1339 0.37 -1.9
1,381,135 + B158DRAFT_1339 0.41 -0.3
1,381,135 + B158DRAFT_1339 0.41 -1.3
1,381,135 + B158DRAFT_1339 0.41 -1.3
1,381,135 + B158DRAFT_1339 0.41 -0.9
1,381,135 + B158DRAFT_1339 0.41 -1.3
1,381,135 + B158DRAFT_1339 0.41 -1.0
1,381,135 + B158DRAFT_1339 0.41 -1.0
1,381,143 - B158DRAFT_1339 0.42 -0.3
1,381,143 - B158DRAFT_1339 0.42 -1.0
1,381,143 - B158DRAFT_1339 0.42 -0.6
1,381,143 - B158DRAFT_1339 0.42 -0.8
1,381,143 - B158DRAFT_1339 0.42 -1.6
1,381,143 - B158DRAFT_1339 0.42 -1.4
1,381,143 - B158DRAFT_1339 0.42 -0.9
1,381,143 - B158DRAFT_1339 0.42 -1.7
1,381,153 - B158DRAFT_1339 0.43 -0.6
1,381,222 + B158DRAFT_1339 0.48 -1.0
1,381,282 - B158DRAFT_1339 0.52 -1.7
1,381,402 - B158DRAFT_1339 0.61 -1.4
1,381,410 + B158DRAFT_1339 0.61 -0.7

Or see this region's nucleotide sequence