Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1305

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1304 and B158DRAFT_1305 are separated by 300 nucleotidesB158DRAFT_1305 and B158DRAFT_1306 are separated by 75 nucleotides B158DRAFT_1304: B158DRAFT_1304 - hypothetical protein, at 1,350,622 to 1,351,671 _1304 B158DRAFT_1305: B158DRAFT_1305 - hypothetical protein, at 1,351,972 to 1,352,769 _1305 B158DRAFT_1306: B158DRAFT_1306 - Uncharacterized conserved protein, at 1,352,845 to 1,354,737 _1306 Position (kb) 1351 1352 1353Strain fitness (log2 ratio) -2 -1 0 1at 1350.986 kb on + strand, within B158DRAFT_1304at 1350.987 kb on - strand, within B158DRAFT_1304at 1350.994 kb on - strand, within B158DRAFT_1304at 1350.994 kb on - strand, within B158DRAFT_1304at 1351.036 kb on - strand, within B158DRAFT_1304at 1351.038 kb on + strand, within B158DRAFT_1304at 1351.038 kb on + strand, within B158DRAFT_1304at 1351.041 kb on - strand, within B158DRAFT_1304at 1351.046 kb on - strand, within B158DRAFT_1304at 1351.052 kb on + strand, within B158DRAFT_1304at 1351.066 kb on - strand, within B158DRAFT_1304at 1351.075 kb on + strand, within B158DRAFT_1304at 1351.083 kb on - strand, within B158DRAFT_1304at 1351.098 kb on - strand, within B158DRAFT_1304at 1351.244 kb on - strand, within B158DRAFT_1304at 1351.361 kb on + strand, within B158DRAFT_1304at 1351.369 kb on - strand, within B158DRAFT_1304at 1351.369 kb on - strand, within B158DRAFT_1304at 1351.422 kb on + strand, within B158DRAFT_1304at 1351.464 kb on + strand, within B158DRAFT_1304at 1351.472 kb on - strand, within B158DRAFT_1304at 1351.477 kb on - strand, within B158DRAFT_1304at 1351.531 kb on - strand, within B158DRAFT_1304at 1351.566 kb on - strand, within B158DRAFT_1304at 1351.570 kb on + strandat 1351.570 kb on + strandat 1351.571 kb on - strandat 1351.578 kb on - strandat 1351.578 kb on - strandat 1351.578 kb on - strandat 1351.631 kb on - strandat 1351.688 kb on - strandat 1352.090 kb on + strand, within B158DRAFT_1305at 1352.231 kb on - strand, within B158DRAFT_1305at 1352.317 kb on - strand, within B158DRAFT_1305at 1352.332 kb on - strand, within B158DRAFT_1305at 1352.395 kb on + strand, within B158DRAFT_1305at 1352.514 kb on + strand, within B158DRAFT_1305at 1352.522 kb on - strand, within B158DRAFT_1305at 1352.951 kb on - strandat 1353.071 kb on - strand, within B158DRAFT_1306at 1353.071 kb on - strand, within B158DRAFT_1306at 1353.072 kb on + strand, within B158DRAFT_1306at 1353.080 kb on - strand, within B158DRAFT_1306at 1353.131 kb on - strand, within B158DRAFT_1306at 1353.252 kb on - strand, within B158DRAFT_1306at 1353.254 kb on + strand, within B158DRAFT_1306at 1353.261 kb on + strand, within B158DRAFT_1306at 1353.380 kb on - strand, within B158DRAFT_1306at 1353.420 kb on - strand, within B158DRAFT_1306at 1353.463 kb on - strand, within B158DRAFT_1306at 1353.565 kb on - strand, within B158DRAFT_1306at 1353.567 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.627 kb on - strand, within B158DRAFT_1306

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
remove
1,350,986 + B158DRAFT_1304 0.35 -0.2
1,350,987 - B158DRAFT_1304 0.35 -0.4
1,350,994 - B158DRAFT_1304 0.35 -0.1
1,350,994 - B158DRAFT_1304 0.35 +0.1
1,351,036 - B158DRAFT_1304 0.39 -1.9
1,351,038 + B158DRAFT_1304 0.40 -0.2
1,351,038 + B158DRAFT_1304 0.40 +0.4
1,351,041 - B158DRAFT_1304 0.40 +0.4
1,351,046 - B158DRAFT_1304 0.40 +0.2
1,351,052 + B158DRAFT_1304 0.41 -0.3
1,351,066 - B158DRAFT_1304 0.42 -0.4
1,351,075 + B158DRAFT_1304 0.43 -0.3
1,351,083 - B158DRAFT_1304 0.44 +0.4
1,351,098 - B158DRAFT_1304 0.45 -0.7
1,351,244 - B158DRAFT_1304 0.59 -0.5
1,351,361 + B158DRAFT_1304 0.70 -0.2
1,351,369 - B158DRAFT_1304 0.71 -0.3
1,351,369 - B158DRAFT_1304 0.71 +0.0
1,351,422 + B158DRAFT_1304 0.76 -0.1
1,351,464 + B158DRAFT_1304 0.80 +0.3
1,351,472 - B158DRAFT_1304 0.81 +0.2
1,351,477 - B158DRAFT_1304 0.81 +0.2
1,351,531 - B158DRAFT_1304 0.87 -0.1
1,351,566 - B158DRAFT_1304 0.90 +0.5
1,351,570 + -0.1
1,351,570 + -1.3
1,351,571 - -0.4
1,351,578 - +0.1
1,351,578 - +0.2
1,351,578 - +0.1
1,351,631 - -0.5
1,351,688 - +0.1
1,352,090 + B158DRAFT_1305 0.15 -2.3
1,352,231 - B158DRAFT_1305 0.32 -1.7
1,352,317 - B158DRAFT_1305 0.43 -0.4
1,352,332 - B158DRAFT_1305 0.45 +0.1
1,352,395 + B158DRAFT_1305 0.53 -0.9
1,352,514 + B158DRAFT_1305 0.68 -0.5
1,352,522 - B158DRAFT_1305 0.69 -0.5
1,352,951 - +0.0
1,353,071 - B158DRAFT_1306 0.12 -0.1
1,353,071 - B158DRAFT_1306 0.12 -0.1
1,353,072 + B158DRAFT_1306 0.12 +0.2
1,353,080 - B158DRAFT_1306 0.12 -0.3
1,353,131 - B158DRAFT_1306 0.15 -0.0
1,353,252 - B158DRAFT_1306 0.22 +0.5
1,353,254 + B158DRAFT_1306 0.22 +0.1
1,353,261 + B158DRAFT_1306 0.22 -0.4
1,353,380 - B158DRAFT_1306 0.28 +0.1
1,353,420 - B158DRAFT_1306 0.30 -0.0
1,353,463 - B158DRAFT_1306 0.33 +0.0
1,353,565 - B158DRAFT_1306 0.38 -0.1
1,353,567 + B158DRAFT_1306 0.38 +0.4
1,353,624 + B158DRAFT_1306 0.41 +1.1
1,353,624 + B158DRAFT_1306 0.41 -0.0
1,353,624 + B158DRAFT_1306 0.41 +0.3
1,353,624 + B158DRAFT_1306 0.41 -0.5
1,353,627 - B158DRAFT_1306 0.41 +0.5

Or see this region's nucleotide sequence