Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1034

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1033 and B158DRAFT_1034 are separated by 83 nucleotidesB158DRAFT_1034 and B158DRAFT_1035 are separated by 213 nucleotides B158DRAFT_1033: B158DRAFT_1033 - trigger factor, at 1,069,744 to 1,071,042 _1033 B158DRAFT_1034: B158DRAFT_1034 - ATP-dependent Clp protease, proteolytic subunit ClpP, at 1,071,126 to 1,071,743 _1034 B158DRAFT_1035: B158DRAFT_1035 - hypothetical protein, at 1,071,957 to 1,073,306 _1035 Position (kb) 1071 1072Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6at 1070.137 kb on - strand, within B158DRAFT_1033at 1070.195 kb on + strand, within B158DRAFT_1033at 1070.203 kb on - strand, within B158DRAFT_1033at 1070.251 kb on + strand, within B158DRAFT_1033at 1070.279 kb on - strand, within B158DRAFT_1033at 1070.341 kb on - strand, within B158DRAFT_1033at 1070.513 kb on - strand, within B158DRAFT_1033at 1070.518 kb on + strand, within B158DRAFT_1033at 1070.602 kb on + strand, within B158DRAFT_1033at 1070.630 kb on + strand, within B158DRAFT_1033at 1070.633 kb on - strand, within B158DRAFT_1033at 1070.648 kb on - strand, within B158DRAFT_1033at 1070.658 kb on - strand, within B158DRAFT_1033at 1070.697 kb on + strand, within B158DRAFT_1033at 1070.720 kb on + strand, within B158DRAFT_1033at 1070.720 kb on + strand, within B158DRAFT_1033at 1070.720 kb on + strand, within B158DRAFT_1033at 1070.720 kb on + strand, within B158DRAFT_1033at 1070.728 kb on - strand, within B158DRAFT_1033at 1070.728 kb on - strand, within B158DRAFT_1033at 1070.728 kb on - strand, within B158DRAFT_1033at 1070.803 kb on + strand, within B158DRAFT_1033at 1070.810 kb on + strand, within B158DRAFT_1033at 1070.818 kb on - strand, within B158DRAFT_1033at 1070.819 kb on - strand, within B158DRAFT_1033at 1070.835 kb on - strand, within B158DRAFT_1033at 1070.895 kb on + strand, within B158DRAFT_1033at 1070.895 kb on + strand, within B158DRAFT_1033at 1070.903 kb on - strand, within B158DRAFT_1033at 1070.903 kb on - strand, within B158DRAFT_1033at 1071.092 kb on - strandat 1071.182 kb on + strandat 1071.182 kb on + strandat 1071.182 kb on + strandat 1071.190 kb on - strand, within B158DRAFT_1034at 1071.192 kb on + strand, within B158DRAFT_1034at 1071.195 kb on - strand, within B158DRAFT_1034at 1071.197 kb on + strand, within B158DRAFT_1034at 1071.383 kb on + strand, within B158DRAFT_1034at 1071.391 kb on - strand, within B158DRAFT_1034at 1071.396 kb on - strand, within B158DRAFT_1034at 1071.406 kb on + strand, within B158DRAFT_1034at 1071.439 kb on - strand, within B158DRAFT_1034at 1071.480 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.485 kb on + strand, within B158DRAFT_1034at 1071.493 kb on - strand, within B158DRAFT_1034at 1071.655 kb on + strand, within B158DRAFT_1034at 1071.679 kb on + strand, within B158DRAFT_1034at 1071.687 kb on - strandat 1071.687 kb on - strandat 1071.692 kb on - strandat 1071.697 kb on + strandat 1071.745 kb on + strandat 1071.745 kb on + strandat 1071.755 kb on + strandat 1071.768 kb on - strandat 1071.791 kb on - strandat 1071.838 kb on + strandat 1071.846 kb on - strandat 1071.890 kb on - strandat 1071.911 kb on - strandat 1071.985 kb on + strandat 1072.062 kb on - strandat 1072.156 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.342 kb on + strand, within B158DRAFT_1035at 1072.347 kb on + strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.350 kb on - strand, within B158DRAFT_1035at 1072.355 kb on - strand, within B158DRAFT_1035at 1072.355 kb on - strand, within B158DRAFT_1035at 1072.355 kb on - strand, within B158DRAFT_1035at 1072.357 kb on + strand, within B158DRAFT_1035at 1072.365 kb on - strand, within B158DRAFT_1035at 1072.365 kb on - strand, within B158DRAFT_1035at 1072.376 kb on + strand, within B158DRAFT_1035at 1072.403 kb on - strand, within B158DRAFT_1035at 1072.405 kb on + strand, within B158DRAFT_1035at 1072.413 kb on - strand, within B158DRAFT_1035at 1072.485 kb on + strand, within B158DRAFT_1035at 1072.485 kb on + strand, within B158DRAFT_1035at 1072.485 kb on + strand, within B158DRAFT_1035at 1072.493 kb on - strand, within B158DRAFT_1035at 1072.493 kb on - strand, within B158DRAFT_1035at 1072.541 kb on - strand, within B158DRAFT_1035at 1072.714 kb on - strand, within B158DRAFT_1035

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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1,070,137 - B158DRAFT_1033 0.30 +0.1
1,070,195 + B158DRAFT_1033 0.35 +1.2
1,070,203 - B158DRAFT_1033 0.35 +1.2
1,070,251 + B158DRAFT_1033 0.39 +0.6
1,070,279 - B158DRAFT_1033 0.41 +0.9
1,070,341 - B158DRAFT_1033 0.46 +1.0
1,070,513 - B158DRAFT_1033 0.59 +0.4
1,070,518 + B158DRAFT_1033 0.60 +0.1
1,070,602 + B158DRAFT_1033 0.66 +0.3
1,070,630 + B158DRAFT_1033 0.68 +0.3
1,070,633 - B158DRAFT_1033 0.68 +0.9
1,070,648 - B158DRAFT_1033 0.70 +1.3
1,070,658 - B158DRAFT_1033 0.70 +0.8
1,070,697 + B158DRAFT_1033 0.73 +1.0
1,070,720 + B158DRAFT_1033 0.75 -0.5
1,070,720 + B158DRAFT_1033 0.75 +0.3
1,070,720 + B158DRAFT_1033 0.75 +0.2
1,070,720 + B158DRAFT_1033 0.75 +0.2
1,070,728 - B158DRAFT_1033 0.76 -0.9
1,070,728 - B158DRAFT_1033 0.76 +0.7
1,070,728 - B158DRAFT_1033 0.76 +0.5
1,070,803 + B158DRAFT_1033 0.82 -0.2
1,070,810 + B158DRAFT_1033 0.82 +0.5
1,070,818 - B158DRAFT_1033 0.83 +0.8
1,070,819 - B158DRAFT_1033 0.83 +0.6
1,070,835 - B158DRAFT_1033 0.84 +0.5
1,070,895 + B158DRAFT_1033 0.89 +0.7
1,070,895 + B158DRAFT_1033 0.89 +0.7
1,070,903 - B158DRAFT_1033 0.89 +0.6
1,070,903 - B158DRAFT_1033 0.89 +1.0
1,071,092 - +3.5
1,071,182 + +3.5
1,071,182 + +6.0
1,071,182 + +3.2
1,071,190 - B158DRAFT_1034 0.10 +3.2
1,071,192 + B158DRAFT_1034 0.11 +3.3
1,071,195 - B158DRAFT_1034 0.11 +3.4
1,071,197 + B158DRAFT_1034 0.11 +3.3
1,071,383 + B158DRAFT_1034 0.42 +3.2
1,071,391 - B158DRAFT_1034 0.43 +3.5
1,071,396 - B158DRAFT_1034 0.44 +3.7
1,071,406 + B158DRAFT_1034 0.45 +3.3
1,071,439 - B158DRAFT_1034 0.51 +3.1
1,071,480 + B158DRAFT_1034 0.57 +2.8
1,071,485 + B158DRAFT_1034 0.58 +3.3
1,071,485 + B158DRAFT_1034 0.58 +3.1
1,071,485 + B158DRAFT_1034 0.58 +4.2
1,071,485 + B158DRAFT_1034 0.58 +2.9
1,071,493 - B158DRAFT_1034 0.59 +3.5
1,071,655 + B158DRAFT_1034 0.86 +3.4
1,071,679 + B158DRAFT_1034 0.89 +3.0
1,071,687 - +3.4
1,071,687 - +3.7
1,071,692 - +3.4
1,071,697 + +2.9
1,071,745 + -0.3
1,071,745 + +0.1
1,071,755 + -0.2
1,071,768 - +0.5
1,071,791 - +0.1
1,071,838 + -0.9
1,071,846 - -0.2
1,071,890 - -0.1
1,071,911 - -0.1
1,071,985 + -0.1
1,072,062 - -0.1
1,072,156 + B158DRAFT_1035 0.15 +0.3
1,072,342 + B158DRAFT_1035 0.29 +0.2
1,072,342 + B158DRAFT_1035 0.29 -0.6
1,072,342 + B158DRAFT_1035 0.29 -1.1
1,072,342 + B158DRAFT_1035 0.29 +0.0
1,072,347 + B158DRAFT_1035 0.29 -0.5
1,072,350 - B158DRAFT_1035 0.29 -0.7
1,072,350 - B158DRAFT_1035 0.29 -0.3
1,072,350 - B158DRAFT_1035 0.29 -0.0
1,072,350 - B158DRAFT_1035 0.29 -0.4
1,072,350 - B158DRAFT_1035 0.29 +0.6
1,072,355 - B158DRAFT_1035 0.29 -0.7
1,072,355 - B158DRAFT_1035 0.29 -0.4
1,072,355 - B158DRAFT_1035 0.29 -0.3
1,072,357 + B158DRAFT_1035 0.30 +0.1
1,072,365 - B158DRAFT_1035 0.30 +0.3
1,072,365 - B158DRAFT_1035 0.30 +0.3
1,072,376 + B158DRAFT_1035 0.31 +0.1
1,072,403 - B158DRAFT_1035 0.33 -0.3
1,072,405 + B158DRAFT_1035 0.33 -1.5
1,072,413 - B158DRAFT_1035 0.34 +0.3
1,072,485 + B158DRAFT_1035 0.39 +0.7
1,072,485 + B158DRAFT_1035 0.39 -0.0
1,072,485 + B158DRAFT_1035 0.39 -0.1
1,072,493 - B158DRAFT_1035 0.40 -0.7
1,072,493 - B158DRAFT_1035 0.40 +0.6
1,072,541 - B158DRAFT_1035 0.43 +0.3
1,072,714 - B158DRAFT_1035 0.56 +0.1

Or see this region's nucleotide sequence