Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1027

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1025 and B158DRAFT_1026 are separated by 19 nucleotidesB158DRAFT_1026 and B158DRAFT_1027 are separated by 28 nucleotidesB158DRAFT_1027 and B158DRAFT_1028 are separated by 66 nucleotides B158DRAFT_1025: B158DRAFT_1025 - Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase, at 1,065,819 to 1,066,778 _1025 B158DRAFT_1026: B158DRAFT_1026 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,066,798 to 1,067,439 _1026 B158DRAFT_1027: B158DRAFT_1027 - Predicted membrane protein, at 1,067,468 to 1,068,007 _1027 B158DRAFT_1028: B158DRAFT_1028 - methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5), at 1,068,074 to 1,068,928 _1028 Position (kb) 1067 1068 1069Strain fitness (log2 ratio) -1 0 1at 1066.491 kb on - strand, within B158DRAFT_1025at 1066.503 kb on + strand, within B158DRAFT_1025at 1066.518 kb on + strand, within B158DRAFT_1025at 1066.550 kb on + strand, within B158DRAFT_1025at 1066.559 kb on - strand, within B158DRAFT_1025at 1066.564 kb on + strand, within B158DRAFT_1025at 1066.564 kb on + strand, within B158DRAFT_1025at 1066.564 kb on + strand, within B158DRAFT_1025at 1066.564 kb on + strand, within B158DRAFT_1025at 1066.582 kb on - strand, within B158DRAFT_1025at 1066.596 kb on + strand, within B158DRAFT_1025at 1066.610 kb on - strand, within B158DRAFT_1025at 1066.682 kb on + strand, within B158DRAFT_1025at 1066.687 kb on + strandat 1066.704 kb on + strandat 1066.721 kb on - strandat 1066.721 kb on - strandat 1066.721 kb on - strandat 1066.730 kb on - strandat 1066.824 kb on - strandat 1066.887 kb on + strand, within B158DRAFT_1026at 1066.908 kb on + strand, within B158DRAFT_1026at 1066.916 kb on - strand, within B158DRAFT_1026at 1066.918 kb on + strand, within B158DRAFT_1026at 1066.918 kb on + strand, within B158DRAFT_1026at 1066.918 kb on + strand, within B158DRAFT_1026at 1066.918 kb on + strand, within B158DRAFT_1026at 1066.918 kb on + strand, within B158DRAFT_1026at 1066.918 kb on + strand, within B158DRAFT_1026at 1066.918 kb on + strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.926 kb on - strand, within B158DRAFT_1026at 1066.935 kb on + strand, within B158DRAFT_1026at 1066.935 kb on + strand, within B158DRAFT_1026at 1066.943 kb on - strand, within B158DRAFT_1026at 1066.953 kb on - strand, within B158DRAFT_1026at 1066.995 kb on - strand, within B158DRAFT_1026at 1066.995 kb on - strand, within B158DRAFT_1026at 1067.117 kb on + strand, within B158DRAFT_1026at 1067.117 kb on + strand, within B158DRAFT_1026at 1067.117 kb on + strand, within B158DRAFT_1026at 1067.125 kb on - strand, within B158DRAFT_1026at 1067.137 kb on + strand, within B158DRAFT_1026at 1067.137 kb on + strand, within B158DRAFT_1026at 1067.138 kb on + strand, within B158DRAFT_1026at 1067.283 kb on + strand, within B158DRAFT_1026at 1067.295 kb on + strand, within B158DRAFT_1026at 1067.295 kb on + strand, within B158DRAFT_1026at 1067.303 kb on - strand, within B158DRAFT_1026at 1067.358 kb on - strand, within B158DRAFT_1026at 1067.366 kb on - strand, within B158DRAFT_1026at 1067.382 kb on + strandat 1067.382 kb on + strandat 1067.411 kb on - strandat 1067.442 kb on - strandat 1067.442 kb on - strandat 1067.537 kb on + strand, within B158DRAFT_1027at 1067.575 kb on + strand, within B158DRAFT_1027at 1067.612 kb on + strand, within B158DRAFT_1027at 1067.620 kb on - strand, within B158DRAFT_1027at 1067.637 kb on + strand, within B158DRAFT_1027at 1067.645 kb on - strand, within B158DRAFT_1027at 1067.645 kb on - strand, within B158DRAFT_1027at 1067.663 kb on + strand, within B158DRAFT_1027at 1067.663 kb on + strand, within B158DRAFT_1027at 1067.671 kb on - strand, within B158DRAFT_1027at 1067.671 kb on - strand, within B158DRAFT_1027at 1067.674 kb on + strand, within B158DRAFT_1027at 1067.674 kb on + strand, within B158DRAFT_1027at 1067.682 kb on - strand, within B158DRAFT_1027at 1067.725 kb on - strand, within B158DRAFT_1027at 1067.782 kb on - strand, within B158DRAFT_1027at 1067.803 kb on + strand, within B158DRAFT_1027at 1067.811 kb on - strand, within B158DRAFT_1027at 1067.811 kb on - strand, within B158DRAFT_1027at 1067.825 kb on - strand, within B158DRAFT_1027at 1067.825 kb on - strand, within B158DRAFT_1027at 1067.958 kb on - strandat 1067.967 kb on - strandat 1067.980 kb on - strandat 1068.998 kb on - strandat 1068.998 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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1,066,491 - B158DRAFT_1025 0.70 -0.5
1,066,503 + B158DRAFT_1025 0.71 +0.1
1,066,518 + B158DRAFT_1025 0.73 +0.1
1,066,550 + B158DRAFT_1025 0.76 -0.4
1,066,559 - B158DRAFT_1025 0.77 -0.5
1,066,564 + B158DRAFT_1025 0.78 -0.3
1,066,564 + B158DRAFT_1025 0.78 -1.4
1,066,564 + B158DRAFT_1025 0.78 -0.7
1,066,564 + B158DRAFT_1025 0.78 -1.0
1,066,582 - B158DRAFT_1025 0.79 +0.4
1,066,596 + B158DRAFT_1025 0.81 -0.3
1,066,610 - B158DRAFT_1025 0.82 -0.1
1,066,682 + B158DRAFT_1025 0.90 -0.3
1,066,687 + +0.3
1,066,704 + -0.3
1,066,721 - -1.0
1,066,721 - -0.6
1,066,721 - -0.3
1,066,730 - +0.4
1,066,824 - +0.9
1,066,887 + B158DRAFT_1026 0.14 -0.1
1,066,908 + B158DRAFT_1026 0.17 +0.0
1,066,916 - B158DRAFT_1026 0.18 +0.1
1,066,918 + B158DRAFT_1026 0.19 +0.0
1,066,918 + B158DRAFT_1026 0.19 +0.1
1,066,918 + B158DRAFT_1026 0.19 -0.1
1,066,918 + B158DRAFT_1026 0.19 -0.6
1,066,918 + B158DRAFT_1026 0.19 +0.0
1,066,918 + B158DRAFT_1026 0.19 +0.3
1,066,918 + B158DRAFT_1026 0.19 -0.1
1,066,926 - B158DRAFT_1026 0.20 -0.7
1,066,926 - B158DRAFT_1026 0.20 -0.0
1,066,926 - B158DRAFT_1026 0.20 +0.2
1,066,926 - B158DRAFT_1026 0.20 +0.0
1,066,926 - B158DRAFT_1026 0.20 -0.7
1,066,926 - B158DRAFT_1026 0.20 +1.4
1,066,926 - B158DRAFT_1026 0.20 +0.0
1,066,926 - B158DRAFT_1026 0.20 -0.6
1,066,935 + B158DRAFT_1026 0.21 -0.4
1,066,935 + B158DRAFT_1026 0.21 -0.1
1,066,943 - B158DRAFT_1026 0.23 +0.2
1,066,953 - B158DRAFT_1026 0.24 -0.2
1,066,995 - B158DRAFT_1026 0.31 -0.1
1,066,995 - B158DRAFT_1026 0.31 +1.1
1,067,117 + B158DRAFT_1026 0.50 +0.3
1,067,117 + B158DRAFT_1026 0.50 -0.1
1,067,117 + B158DRAFT_1026 0.50 -0.1
1,067,125 - B158DRAFT_1026 0.51 -0.3
1,067,137 + B158DRAFT_1026 0.53 -0.0
1,067,137 + B158DRAFT_1026 0.53 -0.4
1,067,138 + B158DRAFT_1026 0.53 +0.5
1,067,283 + B158DRAFT_1026 0.76 +0.4
1,067,295 + B158DRAFT_1026 0.77 -0.7
1,067,295 + B158DRAFT_1026 0.77 +0.1
1,067,303 - B158DRAFT_1026 0.79 +0.3
1,067,358 - B158DRAFT_1026 0.87 -0.7
1,067,366 - B158DRAFT_1026 0.88 -0.2
1,067,382 + +0.3
1,067,382 + -0.6
1,067,411 - +0.0
1,067,442 - -0.5
1,067,442 - +0.5
1,067,537 + B158DRAFT_1027 0.13 +0.0
1,067,575 + B158DRAFT_1027 0.20 -0.2
1,067,612 + B158DRAFT_1027 0.27 -0.8
1,067,620 - B158DRAFT_1027 0.28 -1.0
1,067,637 + B158DRAFT_1027 0.31 -0.4
1,067,645 - B158DRAFT_1027 0.33 +0.8
1,067,645 - B158DRAFT_1027 0.33 -0.5
1,067,663 + B158DRAFT_1027 0.36 +0.0
1,067,663 + B158DRAFT_1027 0.36 -0.7
1,067,671 - B158DRAFT_1027 0.38 -0.0
1,067,671 - B158DRAFT_1027 0.38 -0.6
1,067,674 + B158DRAFT_1027 0.38 -0.2
1,067,674 + B158DRAFT_1027 0.38 -0.2
1,067,682 - B158DRAFT_1027 0.40 -0.9
1,067,725 - B158DRAFT_1027 0.48 +0.4
1,067,782 - B158DRAFT_1027 0.58 +0.2
1,067,803 + B158DRAFT_1027 0.62 -0.2
1,067,811 - B158DRAFT_1027 0.64 -0.0
1,067,811 - B158DRAFT_1027 0.64 +0.6
1,067,825 - B158DRAFT_1027 0.66 -0.5
1,067,825 - B158DRAFT_1027 0.66 -0.3
1,067,958 - -0.3
1,067,967 - -0.0
1,067,980 - -0.6
1,068,998 - -0.5
1,068,998 - -0.6

Or see this region's nucleotide sequence