Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0448

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0446 and B158DRAFT_0447 are separated by 70 nucleotidesB158DRAFT_0447 and B158DRAFT_0448 are separated by 5 nucleotidesB158DRAFT_0448 and B158DRAFT_0449 are separated by 23 nucleotidesB158DRAFT_0449 and B158DRAFT_0450 are separated by 17 nucleotides B158DRAFT_0446: B158DRAFT_0446 - Adenine-specific DNA methylase, at 447,344 to 448,060 _0446 B158DRAFT_0447: B158DRAFT_0447 - Pseudouridylate synthases, 23S RNA-specific, at 448,131 to 448,988 _0447 B158DRAFT_0448: B158DRAFT_0448 - Uracil-DNA glycosylase, at 448,994 to 449,590 _0448 B158DRAFT_0449: B158DRAFT_0449 - hypothetical protein, at 449,614 to 450,036 _0449 B158DRAFT_0450: B158DRAFT_0450 - Uncharacterized protein conserved in bacteria, at 450,054 to 450,767 _0450 Position (kb) 448 449 450Strain fitness (log2 ratio) -2 -1 0 1at 448.032 kb on + strandat 448.033 kb on + strandat 448.075 kb on + strandat 448.186 kb on + strandat 448.193 kb on - strandat 448.250 kb on - strand, within B158DRAFT_0447at 448.392 kb on - strand, within B158DRAFT_0447at 448.417 kb on + strand, within B158DRAFT_0447at 448.456 kb on + strand, within B158DRAFT_0447at 448.485 kb on + strand, within B158DRAFT_0447at 448.486 kb on + strand, within B158DRAFT_0447at 448.486 kb on + strand, within B158DRAFT_0447at 448.486 kb on + strand, within B158DRAFT_0447at 448.494 kb on - strand, within B158DRAFT_0447at 448.523 kb on + strand, within B158DRAFT_0447at 448.553 kb on + strand, within B158DRAFT_0447at 448.558 kb on + strand, within B158DRAFT_0447at 448.583 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.590 kb on + strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.598 kb on - strand, within B158DRAFT_0447at 448.618 kb on - strand, within B158DRAFT_0447at 448.636 kb on - strand, within B158DRAFT_0447at 448.682 kb on + strand, within B158DRAFT_0447at 448.779 kb on + strand, within B158DRAFT_0447at 448.835 kb on - strand, within B158DRAFT_0447at 448.842 kb on + strand, within B158DRAFT_0447at 448.842 kb on + strand, within B158DRAFT_0447at 448.880 kb on + strand, within B158DRAFT_0447at 448.891 kb on - strand, within B158DRAFT_0447at 448.893 kb on + strand, within B158DRAFT_0447at 448.901 kb on + strand, within B158DRAFT_0447at 448.909 kb on - strandat 448.909 kb on - strandat 448.909 kb on - strandat 448.911 kb on + strandat 448.957 kb on - strandat 448.957 kb on - strandat 448.971 kb on - strandat 448.971 kb on - strandat 449.029 kb on + strandat 449.038 kb on - strandat 449.067 kb on + strand, within B158DRAFT_0448at 449.133 kb on + strand, within B158DRAFT_0448at 449.151 kb on - strand, within B158DRAFT_0448at 449.193 kb on + strand, within B158DRAFT_0448at 449.245 kb on + strand, within B158DRAFT_0448at 449.285 kb on - strand, within B158DRAFT_0448at 449.461 kb on + strand, within B158DRAFT_0448at 449.461 kb on + strand, within B158DRAFT_0448at 449.461 kb on + strand, within B158DRAFT_0448at 449.461 kb on + strand, within B158DRAFT_0448at 449.461 kb on + strand, within B158DRAFT_0448at 449.461 kb on + strand, within B158DRAFT_0448at 449.461 kb on + strand, within B158DRAFT_0448at 449.469 kb on - strand, within B158DRAFT_0448at 449.469 kb on - strand, within B158DRAFT_0448at 449.469 kb on - strand, within B158DRAFT_0448at 449.469 kb on - strand, within B158DRAFT_0448at 449.469 kb on - strand, within B158DRAFT_0448at 449.469 kb on - strand, within B158DRAFT_0448at 449.483 kb on + strand, within B158DRAFT_0448at 449.486 kb on + strand, within B158DRAFT_0448at 449.560 kb on + strandat 449.560 kb on + strandat 449.560 kb on - strandat 449.568 kb on - strandat 449.576 kb on + strandat 449.653 kb on - strandat 449.682 kb on + strand, within B158DRAFT_0449at 449.682 kb on + strand, within B158DRAFT_0449at 449.687 kb on + strand, within B158DRAFT_0449at 449.763 kb on - strand, within B158DRAFT_0449at 449.869 kb on + strand, within B158DRAFT_0449at 449.875 kb on - strand, within B158DRAFT_0449at 449.877 kb on - strand, within B158DRAFT_0449at 449.892 kb on - strand, within B158DRAFT_0449at 450.013 kb on - strandat 450.036 kb on + strandat 450.173 kb on - strand, within B158DRAFT_0450at 450.201 kb on + strand, within B158DRAFT_0450at 450.210 kb on + strand, within B158DRAFT_0450at 450.260 kb on - strand, within B158DRAFT_0450at 450.314 kb on - strand, within B158DRAFT_0450at 450.464 kb on + strand, within B158DRAFT_0450at 450.464 kb on + strand, within B158DRAFT_0450at 450.464 kb on + strand, within B158DRAFT_0450at 450.472 kb on - strand, within B158DRAFT_0450at 450.472 kb on - strand, within B158DRAFT_0450at 450.540 kb on - strand, within B158DRAFT_0450at 450.560 kb on + strand, within B158DRAFT_0450at 450.566 kb on - strand, within B158DRAFT_0450at 450.568 kb on - strand, within B158DRAFT_0450

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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448,032 + +0.1
448,033 + -0.3
448,075 + +0.5
448,186 + -0.9
448,193 - +0.8
448,250 - B158DRAFT_0447 0.14 -0.2
448,392 - B158DRAFT_0447 0.30 -1.1
448,417 + B158DRAFT_0447 0.33 +0.4
448,456 + B158DRAFT_0447 0.38 -0.8
448,485 + B158DRAFT_0447 0.41 +0.2
448,486 + B158DRAFT_0447 0.41 -0.2
448,486 + B158DRAFT_0447 0.41 -0.1
448,486 + B158DRAFT_0447 0.41 -0.3
448,494 - B158DRAFT_0447 0.42 +0.1
448,523 + B158DRAFT_0447 0.46 -0.6
448,553 + B158DRAFT_0447 0.49 -0.1
448,558 + B158DRAFT_0447 0.50 -0.2
448,583 + B158DRAFT_0447 0.53 -0.4
448,590 + B158DRAFT_0447 0.53 -0.6
448,590 + B158DRAFT_0447 0.53 +0.1
448,590 + B158DRAFT_0447 0.53 -0.3
448,590 + B158DRAFT_0447 0.53 -0.1
448,598 - B158DRAFT_0447 0.54 -0.4
448,598 - B158DRAFT_0447 0.54 -0.3
448,598 - B158DRAFT_0447 0.54 +0.1
448,598 - B158DRAFT_0447 0.54 +0.1
448,618 - B158DRAFT_0447 0.57 +0.2
448,636 - B158DRAFT_0447 0.59 +0.1
448,682 + B158DRAFT_0447 0.64 -0.3
448,779 + B158DRAFT_0447 0.76 -0.2
448,835 - B158DRAFT_0447 0.82 +0.2
448,842 + B158DRAFT_0447 0.83 -0.3
448,842 + B158DRAFT_0447 0.83 +0.3
448,880 + B158DRAFT_0447 0.87 -0.2
448,891 - B158DRAFT_0447 0.89 -1.8
448,893 + B158DRAFT_0447 0.89 -1.5
448,901 + B158DRAFT_0447 0.90 -0.5
448,909 - -1.8
448,909 - -0.3
448,909 - -0.2
448,911 + -0.0
448,957 - +0.2
448,957 - +0.0
448,971 - -0.7
448,971 - -0.3
449,029 + -0.8
449,038 - -0.4
449,067 + B158DRAFT_0448 0.12 -0.3
449,133 + B158DRAFT_0448 0.23 +0.1
449,151 - B158DRAFT_0448 0.26 +0.6
449,193 + B158DRAFT_0448 0.33 -0.4
449,245 + B158DRAFT_0448 0.42 -1.3
449,285 - B158DRAFT_0448 0.49 +0.4
449,461 + B158DRAFT_0448 0.78 -0.0
449,461 + B158DRAFT_0448 0.78 -1.2
449,461 + B158DRAFT_0448 0.78 -0.4
449,461 + B158DRAFT_0448 0.78 -0.7
449,461 + B158DRAFT_0448 0.78 -0.2
449,461 + B158DRAFT_0448 0.78 -0.7
449,461 + B158DRAFT_0448 0.78 +0.2
449,469 - B158DRAFT_0448 0.80 +0.0
449,469 - B158DRAFT_0448 0.80 -1.1
449,469 - B158DRAFT_0448 0.80 -0.2
449,469 - B158DRAFT_0448 0.80 -0.3
449,469 - B158DRAFT_0448 0.80 +0.4
449,469 - B158DRAFT_0448 0.80 +0.2
449,483 + B158DRAFT_0448 0.82 -0.4
449,486 + B158DRAFT_0448 0.82 -0.9
449,560 + -0.2
449,560 + +0.3
449,560 - -0.7
449,568 - -0.8
449,576 + -0.4
449,653 - -0.1
449,682 + B158DRAFT_0449 0.16 +0.1
449,682 + B158DRAFT_0449 0.16 -1.2
449,687 + B158DRAFT_0449 0.17 -0.3
449,763 - B158DRAFT_0449 0.35 +0.1
449,869 + B158DRAFT_0449 0.60 -0.3
449,875 - B158DRAFT_0449 0.62 +0.1
449,877 - B158DRAFT_0449 0.62 +0.0
449,892 - B158DRAFT_0449 0.66 +0.0
450,013 - -0.3
450,036 + -0.1
450,173 - B158DRAFT_0450 0.17 -0.2
450,201 + B158DRAFT_0450 0.21 -0.1
450,210 + B158DRAFT_0450 0.22 +0.2
450,260 - B158DRAFT_0450 0.29 -0.4
450,314 - B158DRAFT_0450 0.36 -0.3
450,464 + B158DRAFT_0450 0.57 -0.4
450,464 + B158DRAFT_0450 0.57 -0.9
450,464 + B158DRAFT_0450 0.57 -0.7
450,472 - B158DRAFT_0450 0.59 +0.3
450,472 - B158DRAFT_0450 0.59 -0.2
450,540 - B158DRAFT_0450 0.68 +0.0
450,560 + B158DRAFT_0450 0.71 -0.6
450,566 - B158DRAFT_0450 0.72 +0.0
450,568 - B158DRAFT_0450 0.72 +0.2

Or see this region's nucleotide sequence