Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0313

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0311 and B158DRAFT_0312 are separated by 207 nucleotidesB158DRAFT_0312 and B158DRAFT_0313 are separated by 22 nucleotidesB158DRAFT_0313 and B158DRAFT_0314 overlap by 4 nucleotidesB158DRAFT_0314 and B158DRAFT_0315 are separated by 124 nucleotides B158DRAFT_0311: B158DRAFT_0311 - hypothetical protein, at 315,874 to 316,572 _0311 B158DRAFT_0312: B158DRAFT_0312 - hypothetical protein, at 316,780 to 317,160 _0312 B158DRAFT_0313: B158DRAFT_0313 - hypothetical protein, at 317,183 to 317,380 _0313 B158DRAFT_0314: B158DRAFT_0314 - hypothetical protein, at 317,377 to 317,808 _0314 B158DRAFT_0315: B158DRAFT_0315 - Cytochrome B561, at 317,933 to 318,469 _0315 Position (kb) 317 318Strain fitness (log2 ratio) -1 0 1at 316.201 kb on + strand, within B158DRAFT_0311at 316.201 kb on + strand, within B158DRAFT_0311at 316.201 kb on - strand, within B158DRAFT_0311at 316.209 kb on - strand, within B158DRAFT_0311at 316.225 kb on + strand, within B158DRAFT_0311at 316.238 kb on - strand, within B158DRAFT_0311at 316.304 kb on + strand, within B158DRAFT_0311at 316.371 kb on - strand, within B158DRAFT_0311at 316.681 kb on - strandat 316.795 kb on - strandat 316.949 kb on + strand, within B158DRAFT_0312at 316.990 kb on + strand, within B158DRAFT_0312at 317.201 kb on - strandat 317.297 kb on + strand, within B158DRAFT_0313at 317.304 kb on - strand, within B158DRAFT_0313at 317.361 kb on - strandat 317.433 kb on - strand, within B158DRAFT_0314at 317.446 kb on + strand, within B158DRAFT_0314at 317.465 kb on - strand, within B158DRAFT_0314at 317.748 kb on + strand, within B158DRAFT_0314at 317.756 kb on - strand, within B158DRAFT_0314at 317.789 kb on + strandat 317.854 kb on + strandat 318.135 kb on - strand, within B158DRAFT_0315at 318.135 kb on - strand, within B158DRAFT_0315at 318.172 kb on - strand, within B158DRAFT_0315at 318.177 kb on + strand, within B158DRAFT_0315at 318.182 kb on - strand, within B158DRAFT_0315at 318.305 kb on + strand, within B158DRAFT_0315at 318.313 kb on + strand, within B158DRAFT_0315at 318.329 kb on + strand, within B158DRAFT_0315at 318.337 kb on - strand, within B158DRAFT_0315

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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316,201 + B158DRAFT_0311 0.47 +0.9
316,201 + B158DRAFT_0311 0.47 -0.8
316,201 - B158DRAFT_0311 0.47 -0.1
316,209 - B158DRAFT_0311 0.48 +0.1
316,225 + B158DRAFT_0311 0.50 -0.1
316,238 - B158DRAFT_0311 0.52 -0.4
316,304 + B158DRAFT_0311 0.62 -0.2
316,371 - B158DRAFT_0311 0.71 -0.0
316,681 - -0.3
316,795 - -0.8
316,949 + B158DRAFT_0312 0.44 -0.7
316,990 + B158DRAFT_0312 0.55 -0.8
317,201 - -0.2
317,297 + B158DRAFT_0313 0.58 +0.2
317,304 - B158DRAFT_0313 0.61 +0.8
317,361 - -0.2
317,433 - B158DRAFT_0314 0.13 -0.1
317,446 + B158DRAFT_0314 0.16 +0.6
317,465 - B158DRAFT_0314 0.20 -0.2
317,748 + B158DRAFT_0314 0.86 +0.4
317,756 - B158DRAFT_0314 0.88 -0.8
317,789 + -0.7
317,854 + +0.1
318,135 - B158DRAFT_0315 0.38 +0.8
318,135 - B158DRAFT_0315 0.38 -0.0
318,172 - B158DRAFT_0315 0.45 +0.2
318,177 + B158DRAFT_0315 0.45 -0.2
318,182 - B158DRAFT_0315 0.46 +0.4
318,305 + B158DRAFT_0315 0.69 -0.2
318,313 + B158DRAFT_0315 0.71 -1.1
318,329 + B158DRAFT_0315 0.74 -0.6
318,337 - B158DRAFT_0315 0.75 +0.0

Or see this region's nucleotide sequence