Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0101

Experiment: m.b. Paraquat dichloride 0.0078125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0100 and B158DRAFT_0101 are separated by 195 nucleotidesB158DRAFT_0101 and B158DRAFT_0102 are separated by 728 nucleotides B158DRAFT_0100: B158DRAFT_0100 - Na+/proline symporter, at 93,960 to 95,360 _0100 B158DRAFT_0101: B158DRAFT_0101 - YceI-like domain., at 95,556 to 96,170 _0101 B158DRAFT_0102: B158DRAFT_0102 - hypothetical protein, at 96,899 to 97,384 _0102 Position (kb) 95 96 97Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7 8 9at 94.558 kb on + strand, within B158DRAFT_0100at 94.566 kb on - strand, within B158DRAFT_0100at 94.576 kb on - strand, within B158DRAFT_0100at 94.583 kb on + strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.591 kb on - strand, within B158DRAFT_0100at 94.601 kb on + strand, within B158DRAFT_0100at 94.626 kb on - strand, within B158DRAFT_0100at 94.630 kb on - strand, within B158DRAFT_0100at 94.707 kb on - strand, within B158DRAFT_0100at 94.733 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.743 kb on + strand, within B158DRAFT_0100at 94.751 kb on - strand, within B158DRAFT_0100at 94.818 kb on + strand, within B158DRAFT_0100at 94.829 kb on + strand, within B158DRAFT_0100at 94.829 kb on + strand, within B158DRAFT_0100at 94.841 kb on - strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.951 kb on + strand, within B158DRAFT_0100at 94.964 kb on - strand, within B158DRAFT_0100at 94.969 kb on + strand, within B158DRAFT_0100at 94.977 kb on - strand, within B158DRAFT_0100at 94.977 kb on - strand, within B158DRAFT_0100at 94.985 kb on - strand, within B158DRAFT_0100at 95.029 kb on - strand, within B158DRAFT_0100at 95.034 kb on - strand, within B158DRAFT_0100at 95.040 kb on + strand, within B158DRAFT_0100at 95.048 kb on + strand, within B158DRAFT_0100at 95.064 kb on - strand, within B158DRAFT_0100at 95.064 kb on - strand, within B158DRAFT_0100at 95.117 kb on + strand, within B158DRAFT_0100at 95.177 kb on - strand, within B158DRAFT_0100at 95.291 kb on - strandat 95.370 kb on + strandat 95.377 kb on - strandat 95.380 kb on + strandat 95.399 kb on + strandat 95.407 kb on - strandat 95.607 kb on + strandat 95.610 kb on + strandat 95.610 kb on + strandat 95.612 kb on + strandat 95.676 kb on - strand, within B158DRAFT_0101at 95.681 kb on - strand, within B158DRAFT_0101at 95.689 kb on - strand, within B158DRAFT_0101at 95.709 kb on + strand, within B158DRAFT_0101at 95.714 kb on + strand, within B158DRAFT_0101at 95.722 kb on - strand, within B158DRAFT_0101at 95.722 kb on - strand, within B158DRAFT_0101at 95.817 kb on - strand, within B158DRAFT_0101at 95.991 kb on + strand, within B158DRAFT_0101at 96.058 kb on + strand, within B158DRAFT_0101at 96.058 kb on + strand, within B158DRAFT_0101at 96.058 kb on + strand, within B158DRAFT_0101at 96.066 kb on - strand, within B158DRAFT_0101at 96.066 kb on - strand, within B158DRAFT_0101at 96.066 kb on - strand, within B158DRAFT_0101at 96.403 kb on - strandat 96.403 kb on - strandat 96.403 kb on - strandat 96.403 kb on - strandat 96.436 kb on + strandat 96.456 kb on + strandat 96.482 kb on + strandat 96.482 kb on + strandat 96.490 kb on - strandat 96.596 kb on + strandat 96.682 kb on + strandat 96.734 kb on - strandat 96.744 kb on - strandat 96.764 kb on + strandat 96.764 kb on + strandat 96.771 kb on - strandat 97.056 kb on + strand, within B158DRAFT_0102at 97.056 kb on + strand, within B158DRAFT_0102at 97.056 kb on + strand, within B158DRAFT_0102at 97.056 kb on + strand, within B158DRAFT_0102at 97.056 kb on + strand, within B158DRAFT_0102at 97.056 kb on + strand, within B158DRAFT_0102at 97.056 kb on + strand, within B158DRAFT_0102at 97.056 kb on + strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.064 kb on - strand, within B158DRAFT_0102at 97.125 kb on + strand, within B158DRAFT_0102at 97.130 kb on + strandat 97.158 kb on - strand, within B158DRAFT_0102at 97.158 kb on - strand, within B158DRAFT_0102

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0078125 mg/ml
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94,558 + B158DRAFT_0100 0.43 +7.7
94,566 - B158DRAFT_0100 0.43 +7.6
94,576 - B158DRAFT_0100 0.44 +7.1
94,583 + B158DRAFT_0100 0.44 +7.5
94,591 - B158DRAFT_0100 0.45 +7.7
94,591 - B158DRAFT_0100 0.45 +7.5
94,591 - B158DRAFT_0100 0.45 +7.2
94,591 - B158DRAFT_0100 0.45 +7.5
94,601 + B158DRAFT_0100 0.46 +7.4
94,626 - B158DRAFT_0100 0.48 +7.8
94,630 - B158DRAFT_0100 0.48 +7.8
94,707 - B158DRAFT_0100 0.53 +7.7
94,733 + B158DRAFT_0100 0.55 +7.8
94,743 + B158DRAFT_0100 0.56 +7.2
94,743 + B158DRAFT_0100 0.56 +7.8
94,743 + B158DRAFT_0100 0.56 +8.2
94,743 + B158DRAFT_0100 0.56 +7.8
94,743 + B158DRAFT_0100 0.56 +7.7
94,743 + B158DRAFT_0100 0.56 +8.0
94,743 + B158DRAFT_0100 0.56 +7.5
94,743 + B158DRAFT_0100 0.56 +7.8
94,751 - B158DRAFT_0100 0.56 +8.1
94,818 + B158DRAFT_0100 0.61 +7.2
94,829 + B158DRAFT_0100 0.62 +7.8
94,829 + B158DRAFT_0100 0.62 +7.6
94,841 - B158DRAFT_0100 0.63 +8.0
94,951 + B158DRAFT_0100 0.71 +7.4
94,951 + B158DRAFT_0100 0.71 +7.7
94,951 + B158DRAFT_0100 0.71 +7.8
94,951 + B158DRAFT_0100 0.71 +7.5
94,964 - B158DRAFT_0100 0.72 +7.9
94,969 + B158DRAFT_0100 0.72 +7.7
94,977 - B158DRAFT_0100 0.73 +7.9
94,977 - B158DRAFT_0100 0.73 +7.1
94,985 - B158DRAFT_0100 0.73 +7.4
95,029 - B158DRAFT_0100 0.76 +7.9
95,034 - B158DRAFT_0100 0.77 +8.9
95,040 + B158DRAFT_0100 0.77 +7.5
95,048 + B158DRAFT_0100 0.78 +7.0
95,064 - B158DRAFT_0100 0.79 +7.9
95,064 - B158DRAFT_0100 0.79 +8.0
95,117 + B158DRAFT_0100 0.83 +7.9
95,177 - B158DRAFT_0100 0.87 +7.7
95,291 - +5.9
95,370 + +7.5
95,377 - +7.4
95,380 + +8.0
95,399 + +7.7
95,407 - +7.0
95,607 + -0.0
95,610 + -0.5
95,610 + -0.6
95,612 + -0.5
95,676 - B158DRAFT_0101 0.20 +0.3
95,681 - B158DRAFT_0101 0.20 -1.0
95,689 - B158DRAFT_0101 0.22 -0.9
95,709 + B158DRAFT_0101 0.25 +0.0
95,714 + B158DRAFT_0101 0.26 +0.4
95,722 - B158DRAFT_0101 0.27 -0.1
95,722 - B158DRAFT_0101 0.27 +0.1
95,817 - B158DRAFT_0101 0.42 +0.3
95,991 + B158DRAFT_0101 0.71 -0.1
96,058 + B158DRAFT_0101 0.82 -0.5
96,058 + B158DRAFT_0101 0.82 -0.7
96,058 + B158DRAFT_0101 0.82 -0.1
96,066 - B158DRAFT_0101 0.83 -0.3
96,066 - B158DRAFT_0101 0.83 -0.1
96,066 - B158DRAFT_0101 0.83 -0.2
96,403 - -0.6
96,403 - -0.1
96,403 - -0.2
96,403 - -0.8
96,436 + -0.4
96,456 + -0.2
96,482 + -0.7
96,482 + -0.2
96,490 - -0.4
96,596 + +0.3
96,682 + -0.3
96,734 - +0.2
96,744 - -0.1
96,764 + +0.1
96,764 + -0.9
96,771 - -0.4
97,056 + B158DRAFT_0102 0.32 -0.9
97,056 + B158DRAFT_0102 0.32 -0.4
97,056 + B158DRAFT_0102 0.32 -0.2
97,056 + B158DRAFT_0102 0.32 -0.2
97,056 + B158DRAFT_0102 0.32 -0.1
97,056 + B158DRAFT_0102 0.32 -0.1
97,056 + B158DRAFT_0102 0.32 -1.0
97,056 + B158DRAFT_0102 0.32 -0.6
97,064 - B158DRAFT_0102 0.34 +0.1
97,064 - B158DRAFT_0102 0.34 -0.6
97,064 - B158DRAFT_0102 0.34 -0.0
97,064 - B158DRAFT_0102 0.34 -0.2
97,064 - B158DRAFT_0102 0.34 -0.3
97,064 - B158DRAFT_0102 0.34 -0.5
97,064 - B158DRAFT_0102 0.34 -0.4
97,064 - B158DRAFT_0102 0.34 +0.2
97,064 - B158DRAFT_0102 0.34 +0.2
97,064 - B158DRAFT_0102 0.34 -0.5
97,064 - B158DRAFT_0102 0.34 -0.9
97,125 + B158DRAFT_0102 0.47 -1.1
97,130 + -0.1
97,158 - B158DRAFT_0102 0.53 +0.2
97,158 - B158DRAFT_0102 0.53 +0.4

Or see this region's nucleotide sequence