Experiment: m.b. Cobalt chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1334 and B158DRAFT_1335 are separated by 88 nucleotides B158DRAFT_1335 and B158DRAFT_1336 are separated by 35 nucleotides B158DRAFT_1336 and B158DRAFT_1337 are separated by 141 nucleotides
B158DRAFT_1334: B158DRAFT_1334 - component of chlorite stress sensing system with PGA1_c21010 (DUF692) (from data) , at 1,375,254 to 1,376,039
_1334
B158DRAFT_1335: B158DRAFT_1335 - Surface lipoprotein, at 1,376,128 to 1,376,856
_1335
B158DRAFT_1336: B158DRAFT_1336 - 5'-nucleotidase, at 1,376,892 to 1,377,803
_1336
B158DRAFT_1337: B158DRAFT_1337 - Imidazolonepropionase and related amidohydrolases, at 1,377,945 to 1,379,492
_1337
Position (kb)
1376
1377
1378 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1376.003 kb on + strand at 1376.035 kb on - strand at 1376.048 kb on - strand at 1376.126 kb on - strand at 1376.161 kb on + strand at 1376.169 kb on - strand at 1376.195 kb on + strand at 1376.221 kb on + strand, within B158DRAFT_1335 at 1376.242 kb on - strand, within B158DRAFT_1335 at 1376.283 kb on + strand, within B158DRAFT_1335 at 1376.305 kb on + strand, within B158DRAFT_1335 at 1376.306 kb on + strand, within B158DRAFT_1335 at 1376.306 kb on + strand, within B158DRAFT_1335 at 1376.314 kb on - strand, within B158DRAFT_1335 at 1376.435 kb on + strand, within B158DRAFT_1335 at 1376.435 kb on + strand, within B158DRAFT_1335 at 1376.440 kb on + strand, within B158DRAFT_1335 at 1376.443 kb on - strand, within B158DRAFT_1335 at 1376.448 kb on - strand, within B158DRAFT_1335 at 1376.516 kb on + strand, within B158DRAFT_1335 at 1376.517 kb on - strand, within B158DRAFT_1335 at 1376.594 kb on - strand, within B158DRAFT_1335 at 1376.617 kb on + strand, within B158DRAFT_1335 at 1376.617 kb on + strand, within B158DRAFT_1335 at 1376.625 kb on - strand, within B158DRAFT_1335 at 1376.625 kb on - strand, within B158DRAFT_1335 at 1376.625 kb on - strand, within B158DRAFT_1335 at 1376.630 kb on - strand, within B158DRAFT_1335 at 1376.630 kb on - strand, within B158DRAFT_1335 at 1376.630 kb on - strand, within B158DRAFT_1335 at 1376.664 kb on + strand, within B158DRAFT_1335 at 1376.674 kb on - strand, within B158DRAFT_1335 at 1376.735 kb on + strand, within B158DRAFT_1335 at 1376.762 kb on - strand, within B158DRAFT_1335 at 1376.850 kb on + strand at 1376.867 kb on + strand at 1376.918 kb on + strand at 1376.926 kb on - strand at 1376.938 kb on - strand at 1376.995 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on + strand, within B158DRAFT_1336 at 1377.032 kb on - strand, within B158DRAFT_1336 at 1377.040 kb on - strand, within B158DRAFT_1336 at 1377.040 kb on - strand, within B158DRAFT_1336 at 1377.040 kb on - strand, within B158DRAFT_1336 at 1377.040 kb on - strand, within B158DRAFT_1336 at 1377.040 kb on - strand, within B158DRAFT_1336 at 1377.040 kb on - strand, within B158DRAFT_1336 at 1377.040 kb on - strand, within B158DRAFT_1336 at 1377.201 kb on + strand, within B158DRAFT_1336 at 1377.201 kb on + strand, within B158DRAFT_1336 at 1377.201 kb on + strand, within B158DRAFT_1336 at 1377.209 kb on - strand, within B158DRAFT_1336 at 1377.209 kb on - strand, within B158DRAFT_1336 at 1377.209 kb on - strand, within B158DRAFT_1336 at 1377.209 kb on - strand, within B158DRAFT_1336 at 1377.209 kb on - strand, within B158DRAFT_1336 at 1377.228 kb on - strand, within B158DRAFT_1336 at 1377.274 kb on + strand, within B158DRAFT_1336 at 1377.403 kb on + strand, within B158DRAFT_1336 at 1377.424 kb on + strand, within B158DRAFT_1336 at 1377.432 kb on - strand, within B158DRAFT_1336 at 1377.432 kb on - strand, within B158DRAFT_1336 at 1377.449 kb on + strand, within B158DRAFT_1336 at 1377.465 kb on + strand, within B158DRAFT_1336 at 1377.467 kb on - strand, within B158DRAFT_1336 at 1377.473 kb on - strand, within B158DRAFT_1336 at 1377.474 kb on + strand, within B158DRAFT_1336 at 1377.474 kb on + strand, within B158DRAFT_1336 at 1377.482 kb on - strand, within B158DRAFT_1336 at 1377.625 kb on + strand, within B158DRAFT_1336 at 1377.630 kb on - strand, within B158DRAFT_1336 at 1377.645 kb on + strand, within B158DRAFT_1336 at 1377.668 kb on - strand, within B158DRAFT_1336 at 1377.688 kb on + strand, within B158DRAFT_1336 at 1377.694 kb on + strand, within B158DRAFT_1336 at 1377.732 kb on - strand at 1377.734 kb on - strand at 1377.823 kb on + strand at 1377.823 kb on + strand at 1377.824 kb on - strand at 1377.831 kb on - strand at 1377.831 kb on - strand at 1377.871 kb on + strand at 1378.048 kb on + strand at 1378.048 kb on + strand at 1378.048 kb on + strand at 1378.056 kb on - strand at 1378.056 kb on - strand at 1378.056 kb on - strand at 1378.083 kb on + strand at 1378.087 kb on + strand at 1378.092 kb on + strand at 1378.100 kb on - strand, within B158DRAFT_1337 at 1378.190 kb on + strand, within B158DRAFT_1337 at 1378.190 kb on + strand, within B158DRAFT_1337 at 1378.190 kb on + strand, within B158DRAFT_1337 at 1378.190 kb on + strand, within B158DRAFT_1337 at 1378.190 kb on + strand, within B158DRAFT_1337 at 1378.190 kb on + strand, within B158DRAFT_1337 at 1378.190 kb on + strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.198 kb on - strand, within B158DRAFT_1337 at 1378.282 kb on + strand, within B158DRAFT_1337 at 1378.325 kb on + strand, within B158DRAFT_1337 at 1378.326 kb on + strand, within B158DRAFT_1337 at 1378.333 kb on + strand, within B158DRAFT_1337 at 1378.368 kb on + strand, within B158DRAFT_1337 at 1378.389 kb on - strand, within B158DRAFT_1337 at 1378.404 kb on - strand, within B158DRAFT_1337 at 1378.449 kb on - strand, within B158DRAFT_1337 at 1378.499 kb on - strand, within B158DRAFT_1337 at 1378.499 kb on - strand, within B158DRAFT_1337 at 1378.508 kb on - strand, within B158DRAFT_1337 at 1378.510 kb on - strand, within B158DRAFT_1337 at 1378.526 kb on - strand, within B158DRAFT_1337 at 1378.561 kb on - strand, within B158DRAFT_1337 at 1378.565 kb on + strand, within B158DRAFT_1337 at 1378.576 kb on + strand, within B158DRAFT_1337 at 1378.635 kb on - strand, within B158DRAFT_1337 at 1378.652 kb on + strand, within B158DRAFT_1337 at 1378.671 kb on + strand, within B158DRAFT_1337 at 1378.686 kb on - strand, within B158DRAFT_1337 at 1378.710 kb on + strand, within B158DRAFT_1337 at 1378.785 kb on + strand, within B158DRAFT_1337 at 1378.803 kb on - strand, within B158DRAFT_1337
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM remove 1,376,003 + -1.9 1,376,035 - -1.1 1,376,048 - +0.4 1,376,126 - -2.7 1,376,161 + -3.6 1,376,169 - -3.1 1,376,195 + -1.5 1,376,221 + B158DRAFT_1335 0.13 -3.2 1,376,242 - B158DRAFT_1335 0.16 -2.0 1,376,283 + B158DRAFT_1335 0.21 -3.5 1,376,305 + B158DRAFT_1335 0.24 -2.6 1,376,306 + B158DRAFT_1335 0.24 -1.7 1,376,306 + B158DRAFT_1335 0.24 -3.1 1,376,314 - B158DRAFT_1335 0.26 -2.2 1,376,435 + B158DRAFT_1335 0.42 -2.0 1,376,435 + B158DRAFT_1335 0.42 -2.6 1,376,440 + B158DRAFT_1335 0.43 -2.7 1,376,443 - B158DRAFT_1335 0.43 -4.9 1,376,448 - B158DRAFT_1335 0.44 -1.7 1,376,516 + B158DRAFT_1335 0.53 -4.0 1,376,517 - B158DRAFT_1335 0.53 -3.6 1,376,594 - B158DRAFT_1335 0.64 -3.2 1,376,617 + B158DRAFT_1335 0.67 -1.7 1,376,617 + B158DRAFT_1335 0.67 -1.5 1,376,625 - B158DRAFT_1335 0.68 -3.5 1,376,625 - B158DRAFT_1335 0.68 -2.0 1,376,625 - B158DRAFT_1335 0.68 -3.1 1,376,630 - B158DRAFT_1335 0.69 -1.2 1,376,630 - B158DRAFT_1335 0.69 -1.0 1,376,630 - B158DRAFT_1335 0.69 -2.7 1,376,664 + B158DRAFT_1335 0.74 -3.5 1,376,674 - B158DRAFT_1335 0.75 -4.6 1,376,735 + B158DRAFT_1335 0.83 -2.5 1,376,762 - B158DRAFT_1335 0.87 -3.2 1,376,850 + +0.2 1,376,867 + -0.1 1,376,918 + -0.2 1,376,926 - -0.6 1,376,938 - -0.1 1,376,995 + B158DRAFT_1336 0.11 +0.0 1,377,032 + B158DRAFT_1336 0.15 +0.0 1,377,032 + B158DRAFT_1336 0.15 -0.0 1,377,032 + B158DRAFT_1336 0.15 -0.2 1,377,032 + B158DRAFT_1336 0.15 -0.7 1,377,032 + B158DRAFT_1336 0.15 +0.0 1,377,032 + B158DRAFT_1336 0.15 -0.0 1,377,032 + B158DRAFT_1336 0.15 -0.2 1,377,032 + B158DRAFT_1336 0.15 +0.7 1,377,032 + B158DRAFT_1336 0.15 -0.2 1,377,032 - B158DRAFT_1336 0.15 +0.3 1,377,040 - B158DRAFT_1336 0.16 -0.8 1,377,040 - B158DRAFT_1336 0.16 -0.1 1,377,040 - B158DRAFT_1336 0.16 -0.4 1,377,040 - B158DRAFT_1336 0.16 -0.4 1,377,040 - B158DRAFT_1336 0.16 +0.2 1,377,040 - B158DRAFT_1336 0.16 +0.3 1,377,040 - B158DRAFT_1336 0.16 -0.1 1,377,201 + B158DRAFT_1336 0.34 -0.1 1,377,201 + B158DRAFT_1336 0.34 -0.2 1,377,201 + B158DRAFT_1336 0.34 +0.5 1,377,209 - B158DRAFT_1336 0.35 +0.1 1,377,209 - B158DRAFT_1336 0.35 +0.0 1,377,209 - B158DRAFT_1336 0.35 -0.6 1,377,209 - B158DRAFT_1336 0.35 -0.2 1,377,209 - B158DRAFT_1336 0.35 -0.5 1,377,228 - B158DRAFT_1336 0.37 -0.3 1,377,274 + B158DRAFT_1336 0.42 -0.0 1,377,403 + B158DRAFT_1336 0.56 -0.2 1,377,424 + B158DRAFT_1336 0.58 -0.3 1,377,432 - B158DRAFT_1336 0.59 +0.1 1,377,432 - B158DRAFT_1336 0.59 -0.0 1,377,449 + B158DRAFT_1336 0.61 -0.4 1,377,465 + B158DRAFT_1336 0.63 -0.7 1,377,467 - B158DRAFT_1336 0.63 +0.2 1,377,473 - B158DRAFT_1336 0.64 -0.3 1,377,474 + B158DRAFT_1336 0.64 -0.2 1,377,474 + B158DRAFT_1336 0.64 +0.2 1,377,482 - B158DRAFT_1336 0.65 -0.3 1,377,625 + B158DRAFT_1336 0.80 +0.1 1,377,630 - B158DRAFT_1336 0.81 -0.6 1,377,645 + B158DRAFT_1336 0.83 -0.0 1,377,668 - B158DRAFT_1336 0.85 +0.6 1,377,688 + B158DRAFT_1336 0.87 +0.5 1,377,694 + B158DRAFT_1336 0.88 -0.1 1,377,732 - +0.2 1,377,734 - -0.2 1,377,823 + +0.1 1,377,823 + -0.5 1,377,824 - -1.7 1,377,831 - +0.8 1,377,831 - -0.3 1,377,871 + -0.3 1,378,048 + +0.0 1,378,048 + -1.2 1,378,048 + +0.1 1,378,056 - +0.1 1,378,056 - -0.6 1,378,056 - -0.3 1,378,083 + -0.0 1,378,087 + +0.0 1,378,092 + -0.3 1,378,100 - B158DRAFT_1337 0.10 -0.2 1,378,190 + B158DRAFT_1337 0.16 +0.1 1,378,190 + B158DRAFT_1337 0.16 -0.2 1,378,190 + B158DRAFT_1337 0.16 -0.4 1,378,190 + B158DRAFT_1337 0.16 +0.3 1,378,190 + B158DRAFT_1337 0.16 +0.0 1,378,190 + B158DRAFT_1337 0.16 -0.7 1,378,190 + B158DRAFT_1337 0.16 +0.3 1,378,198 - B158DRAFT_1337 0.16 -0.0 1,378,198 - B158DRAFT_1337 0.16 -0.3 1,378,198 - B158DRAFT_1337 0.16 -0.0 1,378,198 - B158DRAFT_1337 0.16 -0.3 1,378,198 - B158DRAFT_1337 0.16 -1.7 1,378,198 - B158DRAFT_1337 0.16 -0.7 1,378,198 - B158DRAFT_1337 0.16 -0.0 1,378,198 - B158DRAFT_1337 0.16 -0.3 1,378,198 - B158DRAFT_1337 0.16 -0.3 1,378,198 - B158DRAFT_1337 0.16 +0.2 1,378,198 - B158DRAFT_1337 0.16 +0.3 1,378,198 - B158DRAFT_1337 0.16 -0.2 1,378,198 - B158DRAFT_1337 0.16 +0.2 1,378,198 - B158DRAFT_1337 0.16 +0.4 1,378,198 - B158DRAFT_1337 0.16 +0.1 1,378,198 - B158DRAFT_1337 0.16 +0.2 1,378,282 + B158DRAFT_1337 0.22 -0.9 1,378,325 + B158DRAFT_1337 0.25 -0.3 1,378,326 + B158DRAFT_1337 0.25 -0.6 1,378,333 + B158DRAFT_1337 0.25 +0.5 1,378,368 + B158DRAFT_1337 0.27 -0.3 1,378,389 - B158DRAFT_1337 0.29 -0.1 1,378,404 - B158DRAFT_1337 0.30 -0.9 1,378,449 - B158DRAFT_1337 0.33 +0.2 1,378,499 - B158DRAFT_1337 0.36 +0.0 1,378,499 - B158DRAFT_1337 0.36 -0.5 1,378,508 - B158DRAFT_1337 0.36 +0.3 1,378,510 - B158DRAFT_1337 0.36 +1.3 1,378,526 - B158DRAFT_1337 0.38 -1.0 1,378,561 - B158DRAFT_1337 0.40 -0.1 1,378,565 + B158DRAFT_1337 0.40 +0.2 1,378,576 + B158DRAFT_1337 0.41 +0.1 1,378,635 - B158DRAFT_1337 0.45 -1.0 1,378,652 + B158DRAFT_1337 0.46 -0.4 1,378,671 + B158DRAFT_1337 0.47 +0.3 1,378,686 - B158DRAFT_1337 0.48 -0.3 1,378,710 + B158DRAFT_1337 0.49 -0.1 1,378,785 + B158DRAFT_1337 0.54 -0.1 1,378,803 - B158DRAFT_1337 0.55 -0.3
Or see this region's nucleotide sequence