Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1127

Experiment: m.b. Cobalt chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1126 and B158DRAFT_1127 are separated by 10 nucleotidesB158DRAFT_1127 and B158DRAFT_1128 are separated by 165 nucleotidesB158DRAFT_1128 and B158DRAFT_1129 overlap by 17 nucleotides B158DRAFT_1126: B158DRAFT_1126 - FOG: TPR repeat, SEL1 subfamily, at 1,165,629 to 1,167,098 _1126 B158DRAFT_1127: B158DRAFT_1127 - diguanylate cyclase (GGDEF) domain, at 1,167,109 to 1,168,140 _1127 B158DRAFT_1128: B158DRAFT_1128 - hypothetical protein, at 1,168,306 to 1,168,815 _1128 B158DRAFT_1129: B158DRAFT_1129 - hypothetical protein, at 1,168,799 to 1,169,305 _1129 Position (kb) 1167 1168 1169Strain fitness (log2 ratio) -1 0 1at 1166.110 kb on + strand, within B158DRAFT_1126at 1166.115 kb on + strand, within B158DRAFT_1126at 1166.190 kb on + strand, within B158DRAFT_1126at 1166.254 kb on - strand, within B158DRAFT_1126at 1166.263 kb on + strand, within B158DRAFT_1126at 1166.271 kb on - strand, within B158DRAFT_1126at 1166.271 kb on - strand, within B158DRAFT_1126at 1166.380 kb on + strand, within B158DRAFT_1126at 1166.432 kb on - strand, within B158DRAFT_1126at 1166.459 kb on - strand, within B158DRAFT_1126at 1166.474 kb on + strand, within B158DRAFT_1126at 1166.509 kb on + strand, within B158DRAFT_1126at 1166.509 kb on + strand, within B158DRAFT_1126at 1166.517 kb on - strand, within B158DRAFT_1126at 1166.517 kb on - strand, within B158DRAFT_1126at 1166.517 kb on - strand, within B158DRAFT_1126at 1166.582 kb on + strand, within B158DRAFT_1126at 1166.617 kb on + strand, within B158DRAFT_1126at 1166.617 kb on - strand, within B158DRAFT_1126at 1166.633 kb on + strand, within B158DRAFT_1126at 1166.726 kb on + strand, within B158DRAFT_1126at 1166.749 kb on - strand, within B158DRAFT_1126at 1166.798 kb on + strand, within B158DRAFT_1126at 1166.909 kb on - strand, within B158DRAFT_1126at 1166.914 kb on - strand, within B158DRAFT_1126at 1166.936 kb on + strand, within B158DRAFT_1126at 1166.936 kb on + strand, within B158DRAFT_1126at 1166.938 kb on + strand, within B158DRAFT_1126at 1166.944 kb on - strand, within B158DRAFT_1126at 1166.944 kb on - strand, within B158DRAFT_1126at 1166.944 kb on - strand, within B158DRAFT_1126at 1166.949 kb on - strand, within B158DRAFT_1126at 1166.953 kb on + strandat 1166.953 kb on + strandat 1166.956 kb on - strandat 1166.956 kb on - strandat 1167.166 kb on + strandat 1167.166 kb on + strandat 1167.304 kb on - strand, within B158DRAFT_1127at 1167.403 kb on + strand, within B158DRAFT_1127at 1167.420 kb on - strand, within B158DRAFT_1127at 1167.420 kb on - strand, within B158DRAFT_1127at 1167.446 kb on + strand, within B158DRAFT_1127at 1167.446 kb on + strand, within B158DRAFT_1127at 1167.458 kb on + strand, within B158DRAFT_1127at 1167.458 kb on + strand, within B158DRAFT_1127at 1167.509 kb on + strand, within B158DRAFT_1127at 1167.509 kb on + strand, within B158DRAFT_1127at 1167.765 kb on + strand, within B158DRAFT_1127at 1167.765 kb on + strand, within B158DRAFT_1127at 1167.897 kb on + strand, within B158DRAFT_1127at 1167.932 kb on + strand, within B158DRAFT_1127at 1167.998 kb on - strand, within B158DRAFT_1127at 1168.033 kb on + strand, within B158DRAFT_1127at 1168.041 kb on - strandat 1168.058 kb on - strandat 1168.156 kb on + strandat 1168.174 kb on - strandat 1168.188 kb on - strandat 1168.384 kb on + strand, within B158DRAFT_1128at 1168.416 kb on - strand, within B158DRAFT_1128at 1168.538 kb on - strand, within B158DRAFT_1128at 1168.538 kb on - strand, within B158DRAFT_1128at 1168.583 kb on - strand, within B158DRAFT_1128at 1168.622 kb on - strand, within B158DRAFT_1128at 1168.638 kb on + strand, within B158DRAFT_1128at 1168.638 kb on + strand, within B158DRAFT_1128at 1168.641 kb on - strand, within B158DRAFT_1128at 1168.646 kb on - strand, within B158DRAFT_1128at 1168.653 kb on + strand, within B158DRAFT_1128at 1168.658 kb on + strand, within B158DRAFT_1128at 1168.658 kb on + strand, within B158DRAFT_1128at 1168.658 kb on + strand, within B158DRAFT_1128at 1168.672 kb on + strand, within B158DRAFT_1128at 1168.674 kb on - strand, within B158DRAFT_1128at 1168.724 kb on - strand, within B158DRAFT_1128at 1168.748 kb on + strand, within B158DRAFT_1128at 1168.761 kb on - strand, within B158DRAFT_1128at 1168.824 kb on - strandat 1168.847 kb on - strandat 1168.910 kb on + strand, within B158DRAFT_1129

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
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1,166,110 + B158DRAFT_1126 0.33 -1.2
1,166,115 + B158DRAFT_1126 0.33 -0.4
1,166,190 + B158DRAFT_1126 0.38 -0.4
1,166,254 - B158DRAFT_1126 0.43 -0.5
1,166,263 + B158DRAFT_1126 0.43 -0.3
1,166,271 - B158DRAFT_1126 0.44 -0.6
1,166,271 - B158DRAFT_1126 0.44 -1.2
1,166,380 + B158DRAFT_1126 0.51 -0.3
1,166,432 - B158DRAFT_1126 0.55 -0.9
1,166,459 - B158DRAFT_1126 0.56 -0.5
1,166,474 + B158DRAFT_1126 0.57 -0.6
1,166,509 + B158DRAFT_1126 0.60 -1.7
1,166,509 + B158DRAFT_1126 0.60 +0.3
1,166,517 - B158DRAFT_1126 0.60 -0.3
1,166,517 - B158DRAFT_1126 0.60 -0.4
1,166,517 - B158DRAFT_1126 0.60 -0.3
1,166,582 + B158DRAFT_1126 0.65 -0.3
1,166,617 + B158DRAFT_1126 0.67 -0.6
1,166,617 - B158DRAFT_1126 0.67 -0.5
1,166,633 + B158DRAFT_1126 0.68 -0.4
1,166,726 + B158DRAFT_1126 0.75 -0.8
1,166,749 - B158DRAFT_1126 0.76 -0.3
1,166,798 + B158DRAFT_1126 0.80 -0.1
1,166,909 - B158DRAFT_1126 0.87 -0.2
1,166,914 - B158DRAFT_1126 0.87 -0.1
1,166,936 + B158DRAFT_1126 0.89 +0.0
1,166,936 + B158DRAFT_1126 0.89 -1.1
1,166,938 + B158DRAFT_1126 0.89 +0.3
1,166,944 - B158DRAFT_1126 0.89 -0.6
1,166,944 - B158DRAFT_1126 0.89 -0.1
1,166,944 - B158DRAFT_1126 0.89 +0.2
1,166,949 - B158DRAFT_1126 0.90 -0.6
1,166,953 + -0.1
1,166,953 + +0.4
1,166,956 - -0.3
1,166,956 - -0.7
1,167,166 + -0.1
1,167,166 + -0.4
1,167,304 - B158DRAFT_1127 0.19 -1.2
1,167,403 + B158DRAFT_1127 0.28 -0.1
1,167,420 - B158DRAFT_1127 0.30 +0.5
1,167,420 - B158DRAFT_1127 0.30 -0.0
1,167,446 + B158DRAFT_1127 0.33 -0.4
1,167,446 + B158DRAFT_1127 0.33 -0.6
1,167,458 + B158DRAFT_1127 0.34 -1.1
1,167,458 + B158DRAFT_1127 0.34 +0.4
1,167,509 + B158DRAFT_1127 0.39 -0.2
1,167,509 + B158DRAFT_1127 0.39 -0.2
1,167,765 + B158DRAFT_1127 0.64 -0.0
1,167,765 + B158DRAFT_1127 0.64 +0.3
1,167,897 + B158DRAFT_1127 0.76 -0.8
1,167,932 + B158DRAFT_1127 0.80 -0.3
1,167,998 - B158DRAFT_1127 0.86 +0.5
1,168,033 + B158DRAFT_1127 0.90 -0.4
1,168,041 - -0.2
1,168,058 - +0.2
1,168,156 + -0.0
1,168,174 - -0.7
1,168,188 - +0.4
1,168,384 + B158DRAFT_1128 0.15 -1.3
1,168,416 - B158DRAFT_1128 0.22 -0.4
1,168,538 - B158DRAFT_1128 0.45 -0.6
1,168,538 - B158DRAFT_1128 0.45 -0.4
1,168,583 - B158DRAFT_1128 0.54 +0.1
1,168,622 - B158DRAFT_1128 0.62 -0.5
1,168,638 + B158DRAFT_1128 0.65 -0.2
1,168,638 + B158DRAFT_1128 0.65 +0.1
1,168,641 - B158DRAFT_1128 0.66 -0.0
1,168,646 - B158DRAFT_1128 0.67 +0.5
1,168,653 + B158DRAFT_1128 0.68 -0.4
1,168,658 + B158DRAFT_1128 0.69 +0.3
1,168,658 + B158DRAFT_1128 0.69 +0.2
1,168,658 + B158DRAFT_1128 0.69 -0.3
1,168,672 + B158DRAFT_1128 0.72 -0.1
1,168,674 - B158DRAFT_1128 0.72 +0.1
1,168,724 - B158DRAFT_1128 0.82 -0.3
1,168,748 + B158DRAFT_1128 0.87 -0.4
1,168,761 - B158DRAFT_1128 0.89 -0.7
1,168,824 - +0.5
1,168,847 - -0.2
1,168,910 + B158DRAFT_1129 0.22 -0.3

Or see this region's nucleotide sequence