Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0513

Experiment: m.b. Cobalt chloride 0.625 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0511 and B158DRAFT_0512 are separated by 227 nucleotidesB158DRAFT_0512 and B158DRAFT_0513 overlap by 4 nucleotidesB158DRAFT_0513 and B158DRAFT_0514 are separated by 44 nucleotides B158DRAFT_0511: B158DRAFT_0511 - glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12), at 519,625 to 520,626 _0511 B158DRAFT_0512: B158DRAFT_0512 - hypothetical protein, at 520,854 to 521,003 _0512 B158DRAFT_0513: B158DRAFT_0513 - phosphoglycerate kinase (EC 2.7.2.3), at 521,000 to 522,178 _0513 B158DRAFT_0514: B158DRAFT_0514 - fructose-bisphosphate aldolase (EC 4.1.2.13), at 522,223 to 523,287 _0514 Position (kb) 520 521 522 523Strain fitness (log2 ratio) -1 0 1at 520.775 kb on + strandat 520.805 kb on + strandat 520.877 kb on + strand, within B158DRAFT_0512at 520.882 kb on + strand, within B158DRAFT_0512at 520.882 kb on + strand, within B158DRAFT_0512at 520.890 kb on - strand, within B158DRAFT_0512at 520.998 kb on + strandat 522.179 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
remove
520,775 + -0.5
520,805 + +0.0
520,877 + B158DRAFT_0512 0.15 -0.0
520,882 + B158DRAFT_0512 0.19 -0.8
520,882 + B158DRAFT_0512 0.19 -1.3
520,890 - B158DRAFT_0512 0.24 -1.4
520,998 + -0.6
522,179 + -0.9

Or see this region's nucleotide sequence