Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0469

Experiment: m.b. Cobalt chloride 0.625 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0468 and B158DRAFT_0469 are separated by 2 nucleotidesB158DRAFT_0469 and B158DRAFT_0470 are separated by 31 nucleotidesB158DRAFT_0470 and B158DRAFT_0471 are separated by 221 nucleotides B158DRAFT_0468: B158DRAFT_0468 - glycyl-tRNA synthetase beta chain (EC 6.1.1.14), at 470,335 to 472,395 _0468 B158DRAFT_0469: B158DRAFT_0469 - glycyl-tRNA synthetase alpha chain (EC 6.1.1.14), at 472,398 to 473,462 _0469 B158DRAFT_0470: B158DRAFT_0470 - DNA-3-methyladenine glycosylase I (EC 3.2.2.20), at 473,494 to 474,042 _0470 B158DRAFT_0471: B158DRAFT_0471 - hypothetical protein, at 474,264 to 474,497 _0471 Position (kb) 472 473 474Strain fitness (log2 ratio) -1 0 1 2at 473.542 kb on - strandat 473.563 kb on + strand, within B158DRAFT_0470at 473.563 kb on + strand, within B158DRAFT_0470at 473.571 kb on - strand, within B158DRAFT_0470at 473.611 kb on - strand, within B158DRAFT_0470at 473.612 kb on - strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.623 kb on + strand, within B158DRAFT_0470at 473.631 kb on - strand, within B158DRAFT_0470at 473.631 kb on - strand, within B158DRAFT_0470at 473.661 kb on + strand, within B158DRAFT_0470at 473.713 kb on + strand, within B158DRAFT_0470at 473.808 kb on + strand, within B158DRAFT_0470at 473.847 kb on - strand, within B158DRAFT_0470at 474.065 kb on - strandat 474.126 kb on + strandat 474.126 kb on + strandat 474.134 kb on - strandat 474.249 kb on + strandat 474.250 kb on + strandat 474.250 kb on + strandat 474.258 kb on - strandat 474.382 kb on + strand, within B158DRAFT_0471at 474.387 kb on + strand, within B158DRAFT_0471at 474.387 kb on + strand, within B158DRAFT_0471at 474.390 kb on - strand, within B158DRAFT_0471at 474.395 kb on - strand, within B158DRAFT_0471at 474.395 kb on - strand, within B158DRAFT_0471at 474.415 kb on + strand, within B158DRAFT_0471at 474.423 kb on - strand, within B158DRAFT_0471at 474.423 kb on - strand, within B158DRAFT_0471

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
remove
473,542 - -0.1
473,563 + B158DRAFT_0470 0.13 -0.2
473,563 + B158DRAFT_0470 0.13 -0.4
473,571 - B158DRAFT_0470 0.14 -0.1
473,611 - B158DRAFT_0470 0.21 +0.7
473,612 - B158DRAFT_0470 0.21 +0.3
473,623 + B158DRAFT_0470 0.23 +0.1
473,623 + B158DRAFT_0470 0.23 -0.4
473,623 + B158DRAFT_0470 0.23 -0.3
473,623 + B158DRAFT_0470 0.23 -0.3
473,631 - B158DRAFT_0470 0.25 +0.1
473,631 - B158DRAFT_0470 0.25 +0.3
473,661 + B158DRAFT_0470 0.30 +0.1
473,713 + B158DRAFT_0470 0.40 +0.0
473,808 + B158DRAFT_0470 0.57 -0.3
473,847 - B158DRAFT_0470 0.64 -0.9
474,065 - -0.2
474,126 + +0.5
474,126 + -0.1
474,134 - +0.3
474,249 + -0.2
474,250 + -0.2
474,250 + +2.0
474,258 - -0.4
474,382 + B158DRAFT_0471 0.50 -0.4
474,387 + B158DRAFT_0471 0.53 +0.2
474,387 + B158DRAFT_0471 0.53 -0.5
474,390 - B158DRAFT_0471 0.54 +0.3
474,395 - B158DRAFT_0471 0.56 +0.4
474,395 - B158DRAFT_0471 0.56 +0.6
474,415 + B158DRAFT_0471 0.65 +0.0
474,423 - B158DRAFT_0471 0.68 -0.2
474,423 - B158DRAFT_0471 0.68 +0.5

Or see this region's nucleotide sequence