Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0332

Experiment: m.b. Cobalt chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0330 and B158DRAFT_0331 are separated by 91 nucleotidesB158DRAFT_0331 and B158DRAFT_0332 are separated by 97 nucleotidesB158DRAFT_0332 and B158DRAFT_0333 are separated by 190 nucleotides B158DRAFT_0330: B158DRAFT_0330 - hypothetical protein, at 333,064 to 333,582 _0330 B158DRAFT_0331: B158DRAFT_0331 - hypothetical protein, at 333,674 to 334,300 _0331 B158DRAFT_0332: B158DRAFT_0332 - hypothetical protein, at 334,398 to 334,808 _0332 B158DRAFT_0333: B158DRAFT_0333 - Domain of unknown function (DUF1996)., at 334,999 to 336,411 _0333 Position (kb) 334 335Strain fitness (log2 ratio) -2 -1 0 1at 333.504 kb on - strand, within B158DRAFT_0330at 333.505 kb on + strand, within B158DRAFT_0330at 333.656 kb on + strandat 333.669 kb on - strandat 333.670 kb on - strandat 333.789 kb on - strand, within B158DRAFT_0331at 333.899 kb on + strand, within B158DRAFT_0331at 334.194 kb on + strand, within B158DRAFT_0331at 334.358 kb on + strandat 334.387 kb on - strandat 334.493 kb on + strand, within B158DRAFT_0332at 334.716 kb on + strand, within B158DRAFT_0332at 334.716 kb on + strand, within B158DRAFT_0332at 334.716 kb on + strand, within B158DRAFT_0332at 334.716 kb on + strand, within B158DRAFT_0332at 334.724 kb on - strand, within B158DRAFT_0332at 334.724 kb on - strand, within B158DRAFT_0332at 334.934 kb on - strandat 335.080 kb on - strandat 335.093 kb on + strandat 335.107 kb on + strandat 335.115 kb on - strandat 335.132 kb on + strandat 335.174 kb on + strand, within B158DRAFT_0333at 335.186 kb on + strand, within B158DRAFT_0333at 335.194 kb on - strand, within B158DRAFT_0333at 335.245 kb on + strand, within B158DRAFT_0333at 335.245 kb on - strand, within B158DRAFT_0333at 335.258 kb on + strand, within B158DRAFT_0333at 335.266 kb on - strand, within B158DRAFT_0333at 335.266 kb on - strand, within B158DRAFT_0333at 335.391 kb on + strand, within B158DRAFT_0333at 335.414 kb on - strand, within B158DRAFT_0333at 335.474 kb on + strand, within B158DRAFT_0333at 335.488 kb on + strand, within B158DRAFT_0333at 335.506 kb on - strand, within B158DRAFT_0333at 335.529 kb on - strand, within B158DRAFT_0333at 335.546 kb on + strand, within B158DRAFT_0333at 335.546 kb on + strand, within B158DRAFT_0333at 335.546 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.551 kb on + strand, within B158DRAFT_0333at 335.554 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.559 kb on - strand, within B158DRAFT_0333at 335.577 kb on + strand, within B158DRAFT_0333at 335.604 kb on - strand, within B158DRAFT_0333at 335.643 kb on + strand, within B158DRAFT_0333at 335.752 kb on - strand, within B158DRAFT_0333at 335.799 kb on + strand, within B158DRAFT_0333at 335.799 kb on + strand, within B158DRAFT_0333

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
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333,504 - B158DRAFT_0330 0.85 -0.1
333,505 + B158DRAFT_0330 0.85 -0.6
333,656 + -0.6
333,669 - +0.2
333,670 - -0.7
333,789 - B158DRAFT_0331 0.18 -0.2
333,899 + B158DRAFT_0331 0.36 -0.0
334,194 + B158DRAFT_0331 0.83 -0.7
334,358 + -0.2
334,387 - +0.4
334,493 + B158DRAFT_0332 0.23 -0.0
334,716 + B158DRAFT_0332 0.77 +0.1
334,716 + B158DRAFT_0332 0.77 -0.1
334,716 + B158DRAFT_0332 0.77 -0.3
334,716 + B158DRAFT_0332 0.77 -0.5
334,724 - B158DRAFT_0332 0.79 +0.1
334,724 - B158DRAFT_0332 0.79 -0.5
334,934 - -0.1
335,080 - -0.7
335,093 + -0.4
335,107 + -0.2
335,115 - -0.6
335,132 + -0.3
335,174 + B158DRAFT_0333 0.12 -0.4
335,186 + B158DRAFT_0333 0.13 -0.1
335,194 - B158DRAFT_0333 0.14 -0.6
335,245 + B158DRAFT_0333 0.17 +0.1
335,245 - B158DRAFT_0333 0.17 -0.4
335,258 + B158DRAFT_0333 0.18 +0.2
335,266 - B158DRAFT_0333 0.19 -0.4
335,266 - B158DRAFT_0333 0.19 -0.2
335,391 + B158DRAFT_0333 0.28 -0.3
335,414 - B158DRAFT_0333 0.29 -2.0
335,474 + B158DRAFT_0333 0.34 -0.2
335,488 + B158DRAFT_0333 0.35 -0.6
335,506 - B158DRAFT_0333 0.36 -0.2
335,529 - B158DRAFT_0333 0.38 -0.6
335,546 + B158DRAFT_0333 0.39 -0.6
335,546 + B158DRAFT_0333 0.39 -0.4
335,546 + B158DRAFT_0333 0.39 -0.1
335,551 + B158DRAFT_0333 0.39 -0.2
335,551 + B158DRAFT_0333 0.39 -0.0
335,551 + B158DRAFT_0333 0.39 -0.4
335,551 + B158DRAFT_0333 0.39 -0.3
335,551 + B158DRAFT_0333 0.39 -0.6
335,551 + B158DRAFT_0333 0.39 -0.9
335,551 + B158DRAFT_0333 0.39 +0.5
335,554 - B158DRAFT_0333 0.39 -0.6
335,559 - B158DRAFT_0333 0.40 -0.1
335,559 - B158DRAFT_0333 0.40 -0.3
335,559 - B158DRAFT_0333 0.40 -0.3
335,559 - B158DRAFT_0333 0.40 -0.3
335,559 - B158DRAFT_0333 0.40 +0.2
335,559 - B158DRAFT_0333 0.40 +0.9
335,559 - B158DRAFT_0333 0.40 -0.6
335,559 - B158DRAFT_0333 0.40 -0.4
335,559 - B158DRAFT_0333 0.40 -0.2
335,559 - B158DRAFT_0333 0.40 +0.2
335,559 - B158DRAFT_0333 0.40 +0.3
335,559 - B158DRAFT_0333 0.40 -1.0
335,559 - B158DRAFT_0333 0.40 +0.0
335,559 - B158DRAFT_0333 0.40 -0.3
335,577 + B158DRAFT_0333 0.41 -0.0
335,604 - B158DRAFT_0333 0.43 +0.1
335,643 + B158DRAFT_0333 0.46 -0.0
335,752 - B158DRAFT_0333 0.53 -0.4
335,799 + B158DRAFT_0333 0.57 -0.0
335,799 + B158DRAFT_0333 0.57 -0.4

Or see this region's nucleotide sequence