Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0064

Experiment: m.b. Cobalt chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0063 and B158DRAFT_0064 are separated by 64 nucleotidesB158DRAFT_0064 and B158DRAFT_0065 are separated by 164 nucleotidesB158DRAFT_0065 and B158DRAFT_0066 are separated by 223 nucleotides B158DRAFT_0063: B158DRAFT_0063 - acetate--CoA ligase, at 59,880 to 61,814 _0063 B158DRAFT_0064: B158DRAFT_0064 - Uncharacterized protein conserved in bacteria, at 61,879 to 62,751 _0064 B158DRAFT_0065: B158DRAFT_0065 - hypothetical protein, at 62,916 to 63,422 _0065 B158DRAFT_0066: B158DRAFT_0066 - two component transcriptional regulator, winged helix family, at 63,646 to 64,344 _0066 Position (kb) 61 62 63Strain fitness (log2 ratio) -2 -1 0 1at 60.914 kb on + strand, within B158DRAFT_0063at 60.922 kb on - strand, within B158DRAFT_0063at 60.928 kb on - strand, within B158DRAFT_0063at 61.019 kb on + strand, within B158DRAFT_0063at 61.090 kb on + strand, within B158DRAFT_0063at 61.098 kb on - strand, within B158DRAFT_0063at 61.148 kb on + strand, within B158DRAFT_0063at 61.148 kb on + strand, within B158DRAFT_0063at 61.156 kb on - strand, within B158DRAFT_0063at 61.161 kb on - strand, within B158DRAFT_0063at 61.174 kb on + strand, within B158DRAFT_0063at 61.255 kb on + strand, within B158DRAFT_0063at 61.263 kb on - strand, within B158DRAFT_0063at 61.284 kb on + strand, within B158DRAFT_0063at 61.284 kb on + strand, within B158DRAFT_0063at 61.284 kb on + strand, within B158DRAFT_0063at 61.284 kb on + strand, within B158DRAFT_0063at 61.284 kb on + strand, within B158DRAFT_0063at 61.284 kb on + strand, within B158DRAFT_0063at 61.284 kb on + strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.292 kb on - strand, within B158DRAFT_0063at 61.307 kb on - strand, within B158DRAFT_0063at 61.358 kb on - strand, within B158DRAFT_0063at 61.397 kb on + strand, within B158DRAFT_0063at 61.445 kb on + strand, within B158DRAFT_0063at 61.448 kb on + strand, within B158DRAFT_0063at 61.453 kb on - strand, within B158DRAFT_0063at 61.479 kb on + strand, within B158DRAFT_0063at 61.482 kb on - strand, within B158DRAFT_0063at 61.487 kb on - strand, within B158DRAFT_0063at 61.618 kb on + strand, within B158DRAFT_0063at 61.671 kb on + strandat 61.676 kb on + strandat 61.684 kb on - strandat 61.856 kb on + strandat 61.857 kb on - strandat 61.878 kb on - strandat 61.879 kb on - strandat 61.882 kb on + strandat 61.885 kb on - strandat 61.921 kb on + strandat 62.105 kb on + strand, within B158DRAFT_0064at 62.113 kb on - strand, within B158DRAFT_0064at 62.113 kb on - strand, within B158DRAFT_0064at 62.126 kb on + strand, within B158DRAFT_0064at 62.134 kb on - strand, within B158DRAFT_0064at 62.165 kb on - strand, within B158DRAFT_0064at 62.232 kb on - strand, within B158DRAFT_0064at 62.259 kb on + strand, within B158DRAFT_0064at 62.285 kb on + strand, within B158DRAFT_0064at 62.301 kb on + strand, within B158DRAFT_0064at 62.349 kb on + strand, within B158DRAFT_0064at 62.349 kb on + strand, within B158DRAFT_0064at 62.349 kb on + strand, within B158DRAFT_0064at 62.349 kb on + strand, within B158DRAFT_0064at 62.357 kb on - strand, within B158DRAFT_0064at 62.357 kb on - strand, within B158DRAFT_0064at 62.357 kb on - strand, within B158DRAFT_0064at 62.357 kb on - strand, within B158DRAFT_0064at 62.357 kb on - strand, within B158DRAFT_0064at 62.357 kb on - strand, within B158DRAFT_0064at 62.357 kb on - strand, within B158DRAFT_0064at 62.451 kb on + strand, within B158DRAFT_0064at 62.510 kb on - strand, within B158DRAFT_0064at 62.547 kb on - strand, within B158DRAFT_0064at 62.549 kb on + strand, within B158DRAFT_0064at 62.557 kb on - strand, within B158DRAFT_0064at 62.559 kb on + strand, within B158DRAFT_0064at 62.579 kb on - strand, within B158DRAFT_0064at 62.642 kb on + strand, within B158DRAFT_0064at 62.650 kb on - strand, within B158DRAFT_0064at 62.650 kb on - strand, within B158DRAFT_0064at 62.702 kb on - strandat 62.753 kb on + strandat 62.873 kb on + strandat 63.050 kb on - strand, within B158DRAFT_0065at 63.054 kb on + strand, within B158DRAFT_0065at 63.062 kb on + strand, within B158DRAFT_0065at 63.083 kb on + strand, within B158DRAFT_0065at 63.157 kb on + strand, within B158DRAFT_0065at 63.202 kb on + strand, within B158DRAFT_0065at 63.397 kb on - strandat 63.397 kb on - strandat 63.397 kb on - strandat 63.552 kb on + strandat 63.635 kb on - strandat 63.674 kb on + strandat 63.679 kb on + strandat 63.679 kb on + strandat 63.692 kb on - strandat 63.745 kb on + strand, within B158DRAFT_0066

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
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60,914 + B158DRAFT_0063 0.53 -0.7
60,922 - B158DRAFT_0063 0.54 -0.7
60,928 - B158DRAFT_0063 0.54 -0.2
61,019 + B158DRAFT_0063 0.59 +0.0
61,090 + B158DRAFT_0063 0.63 -0.5
61,098 - B158DRAFT_0063 0.63 +0.1
61,148 + B158DRAFT_0063 0.66 -0.3
61,148 + B158DRAFT_0063 0.66 -0.4
61,156 - B158DRAFT_0063 0.66 -0.6
61,161 - B158DRAFT_0063 0.66 -0.2
61,174 + B158DRAFT_0063 0.67 -0.5
61,255 + B158DRAFT_0063 0.71 -0.3
61,263 - B158DRAFT_0063 0.71 -0.4
61,284 + B158DRAFT_0063 0.73 -0.2
61,284 + B158DRAFT_0063 0.73 +0.2
61,284 + B158DRAFT_0063 0.73 -0.1
61,284 + B158DRAFT_0063 0.73 -0.6
61,284 + B158DRAFT_0063 0.73 +0.1
61,284 + B158DRAFT_0063 0.73 -1.3
61,284 + B158DRAFT_0063 0.73 -0.4
61,292 - B158DRAFT_0063 0.73 +0.1
61,292 - B158DRAFT_0063 0.73 -0.0
61,292 - B158DRAFT_0063 0.73 -0.5
61,292 - B158DRAFT_0063 0.73 -0.2
61,292 - B158DRAFT_0063 0.73 +0.1
61,292 - B158DRAFT_0063 0.73 -1.9
61,292 - B158DRAFT_0063 0.73 +0.8
61,292 - B158DRAFT_0063 0.73 +0.4
61,292 - B158DRAFT_0063 0.73 -0.3
61,307 - B158DRAFT_0063 0.74 +0.6
61,358 - B158DRAFT_0063 0.76 -0.2
61,397 + B158DRAFT_0063 0.78 -0.3
61,445 + B158DRAFT_0063 0.81 +0.7
61,448 + B158DRAFT_0063 0.81 -0.1
61,453 - B158DRAFT_0063 0.81 -0.1
61,479 + B158DRAFT_0063 0.83 -0.3
61,482 - B158DRAFT_0063 0.83 -0.1
61,487 - B158DRAFT_0063 0.83 -0.4
61,618 + B158DRAFT_0063 0.90 -0.0
61,671 + -0.2
61,676 + -0.6
61,684 - -0.2
61,856 + -0.0
61,857 - -0.5
61,878 - +0.2
61,879 - +0.0
61,882 + -0.5
61,885 - -0.4
61,921 + +0.1
62,105 + B158DRAFT_0064 0.26 +0.0
62,113 - B158DRAFT_0064 0.27 -0.2
62,113 - B158DRAFT_0064 0.27 +0.3
62,126 + B158DRAFT_0064 0.28 +0.1
62,134 - B158DRAFT_0064 0.29 +0.4
62,165 - B158DRAFT_0064 0.33 -0.2
62,232 - B158DRAFT_0064 0.40 -0.9
62,259 + B158DRAFT_0064 0.44 -0.3
62,285 + B158DRAFT_0064 0.47 -0.9
62,301 + B158DRAFT_0064 0.48 -0.7
62,349 + B158DRAFT_0064 0.54 +0.1
62,349 + B158DRAFT_0064 0.54 -0.2
62,349 + B158DRAFT_0064 0.54 -0.0
62,349 + B158DRAFT_0064 0.54 -0.8
62,357 - B158DRAFT_0064 0.55 -1.4
62,357 - B158DRAFT_0064 0.55 +0.6
62,357 - B158DRAFT_0064 0.55 +0.1
62,357 - B158DRAFT_0064 0.55 -0.1
62,357 - B158DRAFT_0064 0.55 -0.6
62,357 - B158DRAFT_0064 0.55 -0.5
62,357 - B158DRAFT_0064 0.55 -0.6
62,451 + B158DRAFT_0064 0.66 -0.3
62,510 - B158DRAFT_0064 0.72 -1.5
62,547 - B158DRAFT_0064 0.77 -0.3
62,549 + B158DRAFT_0064 0.77 -2.1
62,557 - B158DRAFT_0064 0.78 +0.4
62,559 + B158DRAFT_0064 0.78 -0.9
62,579 - B158DRAFT_0064 0.80 -1.1
62,642 + B158DRAFT_0064 0.87 +0.0
62,650 - B158DRAFT_0064 0.88 -0.1
62,650 - B158DRAFT_0064 0.88 -0.6
62,702 - -0.4
62,753 + -0.3
62,873 + -0.6
63,050 - B158DRAFT_0065 0.26 -0.5
63,054 + B158DRAFT_0065 0.27 +0.4
63,062 + B158DRAFT_0065 0.29 -0.3
63,083 + B158DRAFT_0065 0.33 -0.8
63,157 + B158DRAFT_0065 0.48 -1.1
63,202 + B158DRAFT_0065 0.56 +0.1
63,397 - -0.3
63,397 - +0.6
63,397 - -0.1
63,552 + -0.3
63,635 - -0.9
63,674 + -0.8
63,679 + +0.1
63,679 + -0.1
63,692 - +0.1
63,745 + B158DRAFT_0066 0.14 +0.5

Or see this region's nucleotide sequence