Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0062

Experiment: m.b. Cobalt chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0060 and B158DRAFT_0061 are separated by 14 nucleotidesB158DRAFT_0061 and B158DRAFT_0062 are separated by 15 nucleotidesB158DRAFT_0062 and B158DRAFT_0063 are separated by 143 nucleotides B158DRAFT_0060: B158DRAFT_0060 - Deoxynucleoside kinases, at 57,413 to 58,066 _0060 B158DRAFT_0061: B158DRAFT_0061 - ketopantoate hydroxymethyltransferase (EC 2.1.2.11), at 58,081 to 58,875 _0061 B158DRAFT_0062: B158DRAFT_0062 - pantoate--beta-alanine ligase, at 58,891 to 59,736 _0062 B158DRAFT_0063: B158DRAFT_0063 - acetate--CoA ligase, at 59,880 to 61,814 _0063 Position (kb) 58 59 60Strain fitness (log2 ratio) -1 0 1at 57.941 kb on + strand, within B158DRAFT_0060at 57.941 kb on + strand, within B158DRAFT_0060at 57.941 kb on + strand, within B158DRAFT_0060at 57.966 kb on + strand, within B158DRAFT_0060at 57.982 kb on + strand, within B158DRAFT_0060at 58.015 kb on + strandat 58.045 kb on + strandat 58.881 kb on + strandat 59.725 kb on - strandat 59.738 kb on - strandat 59.853 kb on + strandat 59.912 kb on + strandat 59.990 kb on + strandat 59.998 kb on - strandat 60.025 kb on + strandat 60.025 kb on + strandat 60.025 kb on + strandat 60.033 kb on - strandat 60.033 kb on - strandat 60.033 kb on - strandat 60.033 kb on - strandat 60.033 kb on - strandat 60.118 kb on - strand, within B158DRAFT_0063at 60.210 kb on - strand, within B158DRAFT_0063at 60.213 kb on - strand, within B158DRAFT_0063at 60.251 kb on - strand, within B158DRAFT_0063at 60.343 kb on + strand, within B158DRAFT_0063at 60.353 kb on - strand, within B158DRAFT_0063at 60.360 kb on - strand, within B158DRAFT_0063at 60.402 kb on - strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.492 kb on + strand, within B158DRAFT_0063at 60.500 kb on - strand, within B158DRAFT_0063at 60.500 kb on - strand, within B158DRAFT_0063at 60.500 kb on - strand, within B158DRAFT_0063at 60.500 kb on - strand, within B158DRAFT_0063at 60.500 kb on - strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.502 kb on + strand, within B158DRAFT_0063at 60.507 kb on + strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.510 kb on - strand, within B158DRAFT_0063at 60.515 kb on - strand, within B158DRAFT_0063at 60.604 kb on + strand, within B158DRAFT_0063at 60.664 kb on - strand, within B158DRAFT_0063at 60.664 kb on - strand, within B158DRAFT_0063at 60.669 kb on - strand, within B158DRAFT_0063at 60.669 kb on - strand, within B158DRAFT_0063at 60.690 kb on + strand, within B158DRAFT_0063at 60.690 kb on + strand, within B158DRAFT_0063at 60.690 kb on + strand, within B158DRAFT_0063at 60.690 kb on + strand, within B158DRAFT_0063at 60.698 kb on - strand, within B158DRAFT_0063at 60.698 kb on - strand, within B158DRAFT_0063at 60.726 kb on + strand, within B158DRAFT_0063at 60.734 kb on - strand, within B158DRAFT_0063

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM
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57,941 + B158DRAFT_0060 0.81 -0.3
57,941 + B158DRAFT_0060 0.81 +0.0
57,941 + B158DRAFT_0060 0.81 -0.2
57,966 + B158DRAFT_0060 0.85 -0.9
57,982 + B158DRAFT_0060 0.87 -0.1
58,015 + -0.7
58,045 + -0.4
58,881 + +0.7
59,725 - -0.8
59,738 - +0.4
59,853 + +1.2
59,912 + -0.6
59,990 + -0.6
59,998 - +0.3
60,025 + -0.6
60,025 + -0.1
60,025 + -0.5
60,033 - -0.3
60,033 - -0.8
60,033 - -0.3
60,033 - +0.0
60,033 - -1.5
60,118 - B158DRAFT_0063 0.12 -0.8
60,210 - B158DRAFT_0063 0.17 -0.2
60,213 - B158DRAFT_0063 0.17 -0.5
60,251 - B158DRAFT_0063 0.19 -0.5
60,343 + B158DRAFT_0063 0.24 -0.1
60,353 - B158DRAFT_0063 0.24 -0.8
60,360 - B158DRAFT_0063 0.25 -0.3
60,402 - B158DRAFT_0063 0.27 +0.1
60,492 + B158DRAFT_0063 0.32 -0.3
60,492 + B158DRAFT_0063 0.32 -0.6
60,492 + B158DRAFT_0063 0.32 -0.2
60,492 + B158DRAFT_0063 0.32 -0.4
60,492 + B158DRAFT_0063 0.32 -0.1
60,492 + B158DRAFT_0063 0.32 -0.4
60,492 + B158DRAFT_0063 0.32 -0.0
60,492 + B158DRAFT_0063 0.32 -0.7
60,492 + B158DRAFT_0063 0.32 +0.3
60,500 - B158DRAFT_0063 0.32 +0.0
60,500 - B158DRAFT_0063 0.32 -0.1
60,500 - B158DRAFT_0063 0.32 -0.2
60,500 - B158DRAFT_0063 0.32 +0.2
60,500 - B158DRAFT_0063 0.32 -0.1
60,502 + B158DRAFT_0063 0.32 -1.2
60,502 + B158DRAFT_0063 0.32 -0.2
60,502 + B158DRAFT_0063 0.32 +0.2
60,502 + B158DRAFT_0063 0.32 -1.1
60,502 + B158DRAFT_0063 0.32 -0.1
60,502 + B158DRAFT_0063 0.32 -0.5
60,502 + B158DRAFT_0063 0.32 +0.0
60,502 + B158DRAFT_0063 0.32 -0.5
60,502 + B158DRAFT_0063 0.32 -0.5
60,507 + B158DRAFT_0063 0.32 -0.6
60,510 - B158DRAFT_0063 0.33 +0.0
60,510 - B158DRAFT_0063 0.33 -1.3
60,510 - B158DRAFT_0063 0.33 -0.1
60,510 - B158DRAFT_0063 0.33 +0.1
60,510 - B158DRAFT_0063 0.33 +0.2
60,510 - B158DRAFT_0063 0.33 -0.1
60,510 - B158DRAFT_0063 0.33 -0.3
60,510 - B158DRAFT_0063 0.33 -0.0
60,510 - B158DRAFT_0063 0.33 +0.0
60,510 - B158DRAFT_0063 0.33 +0.6
60,510 - B158DRAFT_0063 0.33 -0.3
60,510 - B158DRAFT_0063 0.33 -0.3
60,510 - B158DRAFT_0063 0.33 -1.3
60,510 - B158DRAFT_0063 0.33 -0.4
60,510 - B158DRAFT_0063 0.33 -1.4
60,515 - B158DRAFT_0063 0.33 -0.5
60,604 + B158DRAFT_0063 0.37 -0.4
60,664 - B158DRAFT_0063 0.41 +0.0
60,664 - B158DRAFT_0063 0.41 -0.3
60,669 - B158DRAFT_0063 0.41 -0.6
60,669 - B158DRAFT_0063 0.41 -0.3
60,690 + B158DRAFT_0063 0.42 -0.0
60,690 + B158DRAFT_0063 0.42 -0.8
60,690 + B158DRAFT_0063 0.42 +0.3
60,690 + B158DRAFT_0063 0.42 -0.7
60,698 - B158DRAFT_0063 0.42 +0.2
60,698 - B158DRAFT_0063 0.42 +0.9
60,726 + B158DRAFT_0063 0.44 -0.1
60,734 - B158DRAFT_0063 0.44 -0.4

Or see this region's nucleotide sequence