Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2438 and B158DRAFT_2439 are separated by 148 nucleotides B158DRAFT_2439 and B158DRAFT_2440 are separated by 23 nucleotides B158DRAFT_2440 and B158DRAFT_2441 are separated by 132 nucleotides
B158DRAFT_2438: B158DRAFT_2438 - hypothetical protein, at 609,856 to 611,433
_2438
B158DRAFT_2439: B158DRAFT_2439 - Peroxiredoxin, at 611,582 to 612,043
_2439
B158DRAFT_2440: B158DRAFT_2440 - Putative Zn-dependent protease, contains TPR repeats, at 612,067 to 613,566
_2440
B158DRAFT_2441: B158DRAFT_2441 - Predicted permease, at 613,699 to 614,829
_2441
Position (kb) 612
613
614 Strain fitness (log2 ratio) -1
0
1
2 at 611.113 kb on + strand, within B158DRAFT_2438 at 611.125 kb on + strand, within B158DRAFT_2438 at 611.141 kb on + strand, within B158DRAFT_2438 at 611.163 kb on + strand, within B158DRAFT_2438 at 611.189 kb on + strand, within B158DRAFT_2438 at 611.274 kb on + strand, within B158DRAFT_2438 at 611.293 kb on + strand at 611.299 kb on - strand at 611.299 kb on - strand at 611.299 kb on - strand at 611.301 kb on - strand at 611.301 kb on - strand at 611.340 kb on + strand at 611.377 kb on - strand at 611.386 kb on + strand at 611.386 kb on + strand at 611.386 kb on + strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.394 kb on - strand at 611.404 kb on - strand at 611.416 kb on - strand at 611.419 kb on - strand at 611.419 kb on - strand at 611.429 kb on + strand at 611.437 kb on - strand at 611.476 kb on - strand at 611.482 kb on + strand at 611.482 kb on + strand at 611.482 kb on + strand at 611.482 kb on + strand at 611.490 kb on - strand at 611.645 kb on - strand, within B158DRAFT_2439 at 611.725 kb on - strand, within B158DRAFT_2439 at 611.728 kb on - strand, within B158DRAFT_2439 at 611.784 kb on + strand, within B158DRAFT_2439 at 611.792 kb on - strand, within B158DRAFT_2439 at 611.833 kb on - strand, within B158DRAFT_2439 at 612.050 kb on - strand at 612.064 kb on + strand at 612.064 kb on + strand at 612.072 kb on - strand at 612.072 kb on - strand at 612.072 kb on - strand at 612.072 kb on - strand at 612.133 kb on + strand at 612.133 kb on + strand at 612.133 kb on + strand at 612.141 kb on - strand at 612.161 kb on + strand at 612.161 kb on + strand at 612.161 kb on + strand at 612.179 kb on - strand at 612.223 kb on - strand, within B158DRAFT_2440 at 612.223 kb on - strand, within B158DRAFT_2440 at 612.235 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.241 kb on + strand, within B158DRAFT_2440 at 612.248 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.249 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.270 kb on - strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.281 kb on + strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.289 kb on - strand, within B158DRAFT_2440 at 612.294 kb on - strand, within B158DRAFT_2440 at 612.368 kb on + strand, within B158DRAFT_2440 at 612.368 kb on + strand, within B158DRAFT_2440 at 612.376 kb on - strand, within B158DRAFT_2440 at 612.402 kb on - strand, within B158DRAFT_2440 at 612.551 kb on - strand, within B158DRAFT_2440 at 612.619 kb on - strand, within B158DRAFT_2440 at 612.771 kb on - strand, within B158DRAFT_2440 at 612.785 kb on + strand, within B158DRAFT_2440 at 612.854 kb on + strand, within B158DRAFT_2440 at 612.887 kb on + strand, within B158DRAFT_2440 at 612.887 kb on + strand, within B158DRAFT_2440 at 612.973 kb on + strand, within B158DRAFT_2440 at 612.991 kb on - strand, within B158DRAFT_2440 at 612.998 kb on - strand, within B158DRAFT_2440 at 613.030 kb on - strand, within B158DRAFT_2440 at 613.059 kb on - strand, within B158DRAFT_2440 at 613.103 kb on + strand, within B158DRAFT_2440 at 613.103 kb on + strand, within B158DRAFT_2440 at 613.111 kb on - strand, within B158DRAFT_2440 at 613.111 kb on - strand, within B158DRAFT_2440 at 613.127 kb on + strand, within B158DRAFT_2440 at 613.137 kb on + strand, within B158DRAFT_2440 at 613.137 kb on + strand, within B158DRAFT_2440 at 613.137 kb on + strand, within B158DRAFT_2440 at 613.144 kb on + strand, within B158DRAFT_2440 at 613.144 kb on + strand, within B158DRAFT_2440 at 613.144 kb on + strand, within B158DRAFT_2440 at 613.144 kb on + strand, within B158DRAFT_2440 at 613.145 kb on - strand, within B158DRAFT_2440 at 613.145 kb on - strand, within B158DRAFT_2440 at 613.145 kb on - strand, within B158DRAFT_2440 at 613.145 kb on - strand, within B158DRAFT_2440 at 613.152 kb on - strand, within B158DRAFT_2440 at 613.152 kb on - strand, within B158DRAFT_2440 at 613.152 kb on - strand, within B158DRAFT_2440 at 613.152 kb on - strand, within B158DRAFT_2440 at 613.186 kb on + strand, within B158DRAFT_2440 at 613.186 kb on + strand, within B158DRAFT_2440 at 613.186 kb on + strand, within B158DRAFT_2440 at 613.194 kb on - strand, within B158DRAFT_2440 at 613.194 kb on - strand, within B158DRAFT_2440 at 613.198 kb on + strand, within B158DRAFT_2440 at 613.214 kb on + strand, within B158DRAFT_2440 at 613.284 kb on + strand, within B158DRAFT_2440 at 613.284 kb on - strand, within B158DRAFT_2440 at 613.297 kb on - strand, within B158DRAFT_2440 at 613.314 kb on - strand, within B158DRAFT_2440 at 613.320 kb on + strand, within B158DRAFT_2440 at 613.324 kb on + strand, within B158DRAFT_2440 at 613.324 kb on + strand, within B158DRAFT_2440 at 613.331 kb on + strand, within B158DRAFT_2440 at 613.453 kb on - strand at 613.499 kb on - strand at 613.499 kb on - strand at 613.526 kb on + strand at 613.533 kb on + strand at 613.533 kb on + strand at 613.541 kb on - strand at 613.611 kb on + strand at 613.611 kb on + strand at 613.617 kb on + strand at 613.773 kb on - strand at 613.801 kb on + strand at 613.904 kb on - strand, within B158DRAFT_2441 at 613.941 kb on - strand, within B158DRAFT_2441 at 613.970 kb on - strand, within B158DRAFT_2441 at 614.000 kb on - strand, within B158DRAFT_2441 at 614.007 kb on + strand, within B158DRAFT_2441 at 614.015 kb on - strand, within B158DRAFT_2441 at 614.015 kb on - strand, within B158DRAFT_2441 at 614.015 kb on - strand, within B158DRAFT_2441 at 614.026 kb on + strand, within B158DRAFT_2441 at 614.075 kb on + strand, within B158DRAFT_2441 at 614.075 kb on + strand, within B158DRAFT_2441 at 614.080 kb on + strand, within B158DRAFT_2441 at 614.083 kb on - strand, within B158DRAFT_2441 at 614.083 kb on - strand, within B158DRAFT_2441 at 614.083 kb on - strand, within B158DRAFT_2441 at 614.088 kb on - strand, within B158DRAFT_2441 at 614.088 kb on - strand, within B158DRAFT_2441 at 614.088 kb on - strand, within B158DRAFT_2441 at 614.094 kb on - strand, within B158DRAFT_2441 at 614.104 kb on + strand, within B158DRAFT_2441 at 614.129 kb on - strand, within B158DRAFT_2441 at 614.149 kb on + strand, within B158DRAFT_2441 at 614.149 kb on + strand, within B158DRAFT_2441 at 614.157 kb on - strand, within B158DRAFT_2441 at 614.167 kb on - strand, within B158DRAFT_2441 at 614.169 kb on - strand, within B158DRAFT_2441 at 614.255 kb on + strand, within B158DRAFT_2441 at 614.255 kb on + strand, within B158DRAFT_2441 at 614.296 kb on + strand, within B158DRAFT_2441 at 614.401 kb on + strand, within B158DRAFT_2441 at 614.406 kb on + strand, within B158DRAFT_2441 at 614.409 kb on - strand, within B158DRAFT_2441 at 614.416 kb on + strand, within B158DRAFT_2441 at 614.426 kb on + strand, within B158DRAFT_2441 at 614.426 kb on + strand, within B158DRAFT_2441 at 614.432 kb on + strand, within B158DRAFT_2441 at 614.440 kb on - strand, within B158DRAFT_2441 at 614.441 kb on + strand, within B158DRAFT_2441 at 614.449 kb on - strand, within B158DRAFT_2441 at 614.516 kb on + strand, within B158DRAFT_2441
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 611,113 + B158DRAFT_2438 0.80 -1.6 611,125 + B158DRAFT_2438 0.80 +0.7 611,141 + B158DRAFT_2438 0.81 +0.6 611,163 + B158DRAFT_2438 0.83 +0.0 611,189 + B158DRAFT_2438 0.84 +0.1 611,274 + B158DRAFT_2438 0.90 -0.6 611,293 + +0.5 611,299 - +0.2 611,299 - +0.6 611,299 - -0.1 611,301 - +0.2 611,301 - +0.6 611,340 + +1.7 611,377 - -0.1 611,386 + -0.3 611,386 + +0.2 611,386 + -0.2 611,394 - -0.2 611,394 - -0.3 611,394 - +0.3 611,394 - -0.3 611,394 - -0.4 611,394 - -0.1 611,404 - -0.1 611,416 - -0.5 611,419 - -0.6 611,419 - +0.4 611,429 + +0.3 611,437 - -0.5 611,476 - -0.1 611,482 + -0.0 611,482 + +0.0 611,482 + -0.0 611,482 + +0.1 611,490 - -0.3 611,645 - B158DRAFT_2439 0.14 -1.1 611,725 - B158DRAFT_2439 0.31 -0.1 611,728 - B158DRAFT_2439 0.32 +0.1 611,784 + B158DRAFT_2439 0.44 -0.3 611,792 - B158DRAFT_2439 0.45 -0.5 611,833 - B158DRAFT_2439 0.54 +0.8 612,050 - +0.4 612,064 + +0.1 612,064 + +0.1 612,072 - -0.1 612,072 - -0.1 612,072 - -0.0 612,072 - -1.3 612,133 + +0.8 612,133 + +0.5 612,133 + +1.1 612,141 - +0.9 612,161 + +1.4 612,161 + +0.4 612,161 + +1.5 612,179 - +1.4 612,223 - B158DRAFT_2440 0.10 +1.6 612,223 - B158DRAFT_2440 0.10 +1.2 612,235 + B158DRAFT_2440 0.11 +1.3 612,241 + B158DRAFT_2440 0.12 +1.4 612,241 + B158DRAFT_2440 0.12 +1.4 612,241 + B158DRAFT_2440 0.12 +1.2 612,241 + B158DRAFT_2440 0.12 +1.3 612,241 + B158DRAFT_2440 0.12 +1.4 612,248 - B158DRAFT_2440 0.12 +1.0 612,249 - B158DRAFT_2440 0.12 +1.5 612,249 - B158DRAFT_2440 0.12 +0.9 612,249 - B158DRAFT_2440 0.12 +1.3 612,249 - B158DRAFT_2440 0.12 +2.3 612,249 - B158DRAFT_2440 0.12 +2.1 612,270 - B158DRAFT_2440 0.14 +1.1 612,270 - B158DRAFT_2440 0.14 +1.6 612,270 - B158DRAFT_2440 0.14 +1.5 612,270 - B158DRAFT_2440 0.14 +0.9 612,281 + B158DRAFT_2440 0.14 +1.8 612,281 + B158DRAFT_2440 0.14 +1.1 612,281 + B158DRAFT_2440 0.14 +1.3 612,281 + B158DRAFT_2440 0.14 +1.3 612,289 - B158DRAFT_2440 0.15 +1.6 612,289 - B158DRAFT_2440 0.15 +1.4 612,289 - B158DRAFT_2440 0.15 +1.1 612,289 - B158DRAFT_2440 0.15 +1.8 612,289 - B158DRAFT_2440 0.15 +0.6 612,289 - B158DRAFT_2440 0.15 +1.5 612,289 - B158DRAFT_2440 0.15 +2.0 612,289 - B158DRAFT_2440 0.15 +1.6 612,294 - B158DRAFT_2440 0.15 +1.7 612,368 + B158DRAFT_2440 0.20 +1.5 612,368 + B158DRAFT_2440 0.20 +1.8 612,376 - B158DRAFT_2440 0.21 +1.4 612,402 - B158DRAFT_2440 0.22 +1.4 612,551 - B158DRAFT_2440 0.32 +1.3 612,619 - B158DRAFT_2440 0.37 +1.4 612,771 - B158DRAFT_2440 0.47 +1.7 612,785 + B158DRAFT_2440 0.48 +1.1 612,854 + B158DRAFT_2440 0.52 +1.3 612,887 + B158DRAFT_2440 0.55 +1.3 612,887 + B158DRAFT_2440 0.55 +1.7 612,973 + B158DRAFT_2440 0.60 +1.5 612,991 - B158DRAFT_2440 0.62 +1.2 612,998 - B158DRAFT_2440 0.62 +1.3 613,030 - B158DRAFT_2440 0.64 +1.7 613,059 - B158DRAFT_2440 0.66 +1.3 613,103 + B158DRAFT_2440 0.69 +1.5 613,103 + B158DRAFT_2440 0.69 +2.0 613,111 - B158DRAFT_2440 0.70 +1.8 613,111 - B158DRAFT_2440 0.70 +1.3 613,127 + B158DRAFT_2440 0.71 +1.3 613,137 + B158DRAFT_2440 0.71 +2.3 613,137 + B158DRAFT_2440 0.71 +1.1 613,137 + B158DRAFT_2440 0.71 +1.0 613,144 + B158DRAFT_2440 0.72 +2.1 613,144 + B158DRAFT_2440 0.72 +1.7 613,144 + B158DRAFT_2440 0.72 +1.6 613,144 + B158DRAFT_2440 0.72 +1.4 613,145 - B158DRAFT_2440 0.72 +1.7 613,145 - B158DRAFT_2440 0.72 +1.7 613,145 - B158DRAFT_2440 0.72 +1.2 613,145 - B158DRAFT_2440 0.72 +1.0 613,152 - B158DRAFT_2440 0.72 +1.2 613,152 - B158DRAFT_2440 0.72 +2.6 613,152 - B158DRAFT_2440 0.72 +0.9 613,152 - B158DRAFT_2440 0.72 +1.8 613,186 + B158DRAFT_2440 0.75 +0.9 613,186 + B158DRAFT_2440 0.75 +1.4 613,186 + B158DRAFT_2440 0.75 +0.2 613,194 - B158DRAFT_2440 0.75 +1.4 613,194 - B158DRAFT_2440 0.75 +1.6 613,198 + B158DRAFT_2440 0.75 +1.6 613,214 + B158DRAFT_2440 0.76 +1.0 613,284 + B158DRAFT_2440 0.81 +1.8 613,284 - B158DRAFT_2440 0.81 +2.5 613,297 - B158DRAFT_2440 0.82 +1.4 613,314 - B158DRAFT_2440 0.83 +2.3 613,320 + B158DRAFT_2440 0.84 +1.3 613,324 + B158DRAFT_2440 0.84 +1.7 613,324 + B158DRAFT_2440 0.84 +1.9 613,331 + B158DRAFT_2440 0.84 +1.7 613,453 - +1.1 613,499 - +1.3 613,499 - +1.6 613,526 + +1.3 613,533 + +1.6 613,533 + +1.6 613,541 - +0.9 613,611 + +1.1 613,611 + +0.9 613,617 + +1.4 613,773 - +0.1 613,801 + -0.0 613,904 - B158DRAFT_2441 0.18 +0.0 613,941 - B158DRAFT_2441 0.21 +0.1 613,970 - B158DRAFT_2441 0.24 +0.3 614,000 - B158DRAFT_2441 0.27 -0.2 614,007 + B158DRAFT_2441 0.27 -0.4 614,015 - B158DRAFT_2441 0.28 -0.5 614,015 - B158DRAFT_2441 0.28 -0.2 614,015 - B158DRAFT_2441 0.28 +0.3 614,026 + B158DRAFT_2441 0.29 -0.2 614,075 + B158DRAFT_2441 0.33 +0.4 614,075 + B158DRAFT_2441 0.33 +0.3 614,080 + B158DRAFT_2441 0.34 -0.1 614,083 - B158DRAFT_2441 0.34 -0.5 614,083 - B158DRAFT_2441 0.34 -0.3 614,083 - B158DRAFT_2441 0.34 -0.5 614,088 - B158DRAFT_2441 0.34 -0.9 614,088 - B158DRAFT_2441 0.34 +0.1 614,088 - B158DRAFT_2441 0.34 +0.1 614,094 - B158DRAFT_2441 0.35 +0.1 614,104 + B158DRAFT_2441 0.36 -0.3 614,129 - B158DRAFT_2441 0.38 -1.4 614,149 + B158DRAFT_2441 0.40 -0.2 614,149 + B158DRAFT_2441 0.40 +0.1 614,157 - B158DRAFT_2441 0.40 +0.2 614,167 - B158DRAFT_2441 0.41 -0.8 614,169 - B158DRAFT_2441 0.42 -0.8 614,255 + B158DRAFT_2441 0.49 -0.3 614,255 + B158DRAFT_2441 0.49 +0.2 614,296 + B158DRAFT_2441 0.53 -0.1 614,401 + B158DRAFT_2441 0.62 +0.3 614,406 + B158DRAFT_2441 0.63 +0.2 614,409 - B158DRAFT_2441 0.63 -0.3 614,416 + B158DRAFT_2441 0.63 -0.1 614,426 + B158DRAFT_2441 0.64 -1.5 614,426 + B158DRAFT_2441 0.64 -0.2 614,432 + B158DRAFT_2441 0.65 -0.5 614,440 - B158DRAFT_2441 0.66 -0.2 614,441 + B158DRAFT_2441 0.66 +0.3 614,449 - B158DRAFT_2441 0.66 -0.2 614,516 + B158DRAFT_2441 0.72 +0.1
Or see this region's nucleotide sequence