Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2425 and B158DRAFT_2426 overlap by 4 nucleotides B158DRAFT_2426 and B158DRAFT_2427 overlap by 14 nucleotides B158DRAFT_2427 and B158DRAFT_2428 overlap by 8 nucleotides
B158DRAFT_2425: B158DRAFT_2425 - anthranilate synthase, component I (EC 4.1.3.27), at 597,766 to 599,355
_2425
B158DRAFT_2426: B158DRAFT_2426 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 599,352 to 599,966
_2426
B158DRAFT_2427: B158DRAFT_2427 - anthranilate phosphoribosyltransferase, at 599,953 to 600,957
_2427
B158DRAFT_2428: B158DRAFT_2428 - indole-3-glycerol phosphate synthase (EC 4.1.1.48), at 600,950 to 602,410
_2428
Position (kb) 599
600
601 Strain fitness (log2 ratio) -1
0
1 at 599.293 kb on + strand at 599.343 kb on + strand at 599.343 kb on - strand at 599.569 kb on - strand, within B158DRAFT_2426 at 599.723 kb on + strand, within B158DRAFT_2426 at 600.089 kb on + strand, within B158DRAFT_2427 at 600.207 kb on - strand, within B158DRAFT_2427 at 600.347 kb on + strand, within B158DRAFT_2427 at 600.497 kb on - strand, within B158DRAFT_2427 at 600.628 kb on + strand, within B158DRAFT_2427 at 600.653 kb on + strand, within B158DRAFT_2427 at 600.661 kb on - strand, within B158DRAFT_2427 at 600.895 kb on + strand at 601.095 kb on - strand at 601.382 kb on - strand, within B158DRAFT_2428 at 601.417 kb on + strand, within B158DRAFT_2428 at 601.425 kb on - strand, within B158DRAFT_2428 at 601.490 kb on + strand, within B158DRAFT_2428 at 601.509 kb on + strand, within B158DRAFT_2428 at 601.943 kb on - strand, within B158DRAFT_2428 at 601.943 kb on - strand, within B158DRAFT_2428
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 599,293 + -1.5 599,343 + -0.8 599,343 - -1.2 599,569 - B158DRAFT_2426 0.35 -1.5 599,723 + B158DRAFT_2426 0.60 -0.5 600,089 + B158DRAFT_2427 0.14 -0.8 600,207 - B158DRAFT_2427 0.25 -1.7 600,347 + B158DRAFT_2427 0.39 -0.6 600,497 - B158DRAFT_2427 0.54 -1.1 600,628 + B158DRAFT_2427 0.67 -1.1 600,653 + B158DRAFT_2427 0.70 -0.3 600,661 - B158DRAFT_2427 0.70 -0.9 600,895 + -0.9 601,095 - -0.2 601,382 - B158DRAFT_2428 0.30 -0.2 601,417 + B158DRAFT_2428 0.32 -1.2 601,425 - B158DRAFT_2428 0.33 -0.5 601,490 + B158DRAFT_2428 0.37 -0.1 601,509 + B158DRAFT_2428 0.38 -0.9 601,943 - B158DRAFT_2428 0.68 -1.7 601,943 - B158DRAFT_2428 0.68 -1.4
Or see this region's nucleotide sequence