Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2163

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2161 and B158DRAFT_2162 are separated by 30 nucleotidesB158DRAFT_2162 and B158DRAFT_2163 are separated by 124 nucleotidesB158DRAFT_2163 and B158DRAFT_2164 are separated by 75 nucleotides B158DRAFT_2161: B158DRAFT_2161 - sulfite reductase (NADPH) beta subunit (EC 1.8.1.2), at 300,960 to 302,666 _2161 B158DRAFT_2162: B158DRAFT_2162 - phosphoadenosine phosphosulfate reductase, thioredoxin dependent, at 302,697 to 303,410 _2162 B158DRAFT_2163: B158DRAFT_2163 - uroporphyrin-III C-methyltransferase, at 303,535 to 304,977 _2163 B158DRAFT_2164: B158DRAFT_2164 - amino acid/peptide transporter (Peptide:H+ symporter), bacterial, at 305,053 to 307,260 _2164 Position (kb) 303 304 305Strain fitness (log2 ratio) -1 0 1at 302.616 kb on + strandat 302.635 kb on - strandat 302.635 kb on - strandat 302.635 kb on - strandat 302.637 kb on + strandat 302.669 kb on - strandat 302.693 kb on + strandat 302.695 kb on - strandat 302.702 kb on - strandat 302.702 kb on - strandat 302.702 kb on - strandat 302.702 kb on - strandat 302.702 kb on - strandat 302.723 kb on + strandat 302.727 kb on - strandat 302.799 kb on - strand, within B158DRAFT_2162at 302.799 kb on - strand, within B158DRAFT_2162at 302.799 kb on - strand, within B158DRAFT_2162at 302.799 kb on - strand, within B158DRAFT_2162at 302.801 kb on + strand, within B158DRAFT_2162at 302.835 kb on + strand, within B158DRAFT_2162at 302.842 kb on + strand, within B158DRAFT_2162at 302.843 kb on - strand, within B158DRAFT_2162at 302.849 kb on - strand, within B158DRAFT_2162at 302.967 kb on - strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.981 kb on + strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 302.989 kb on - strand, within B158DRAFT_2162at 303.032 kb on - strand, within B158DRAFT_2162at 303.052 kb on + strand, within B158DRAFT_2162at 303.140 kb on + strand, within B158DRAFT_2162at 303.140 kb on + strand, within B158DRAFT_2162at 303.140 kb on + strand, within B158DRAFT_2162at 303.188 kb on + strand, within B158DRAFT_2162at 303.255 kb on + strand, within B158DRAFT_2162at 303.283 kb on - strand, within B158DRAFT_2162at 303.310 kb on + strand, within B158DRAFT_2162at 303.318 kb on - strand, within B158DRAFT_2162at 303.554 kb on + strandat 303.561 kb on + strandat 303.562 kb on - strandat 303.562 kb on - strandat 303.562 kb on - strandat 303.562 kb on - strandat 303.562 kb on - strandat 303.562 kb on - strandat 303.568 kb on - strandat 303.568 kb on - strandat 303.627 kb on + strandat 303.627 kb on + strandat 303.627 kb on + strandat 303.744 kb on + strand, within B158DRAFT_2163at 303.754 kb on + strand, within B158DRAFT_2163at 303.754 kb on + strand, within B158DRAFT_2163at 303.818 kb on + strand, within B158DRAFT_2163at 303.833 kb on - strand, within B158DRAFT_2163at 303.838 kb on - strand, within B158DRAFT_2163at 303.934 kb on + strand, within B158DRAFT_2163at 303.942 kb on - strand, within B158DRAFT_2163at 303.983 kb on + strand, within B158DRAFT_2163at 303.983 kb on + strand, within B158DRAFT_2163at 304.094 kb on + strand, within B158DRAFT_2163at 304.129 kb on - strand, within B158DRAFT_2163at 304.129 kb on - strand, within B158DRAFT_2163at 304.223 kb on - strand, within B158DRAFT_2163at 304.261 kb on + strand, within B158DRAFT_2163at 304.261 kb on + strand, within B158DRAFT_2163at 304.405 kb on + strand, within B158DRAFT_2163at 304.422 kb on + strand, within B158DRAFT_2163at 304.466 kb on + strand, within B158DRAFT_2163at 304.533 kb on - strand, within B158DRAFT_2163at 304.555 kb on + strand, within B158DRAFT_2163at 304.563 kb on - strand, within B158DRAFT_2163at 304.564 kb on + strand, within B158DRAFT_2163at 304.760 kb on + strand, within B158DRAFT_2163at 304.818 kb on + strand, within B158DRAFT_2163at 304.836 kb on + strandat 305.001 kb on - strandat 305.111 kb on + strandat 305.140 kb on + strandat 305.140 kb on + strandat 305.203 kb on - strandat 305.210 kb on + strandat 305.210 kb on + strandat 305.218 kb on - strandat 305.436 kb on + strand, within B158DRAFT_2164at 305.454 kb on - strand, within B158DRAFT_2164at 305.522 kb on + strand, within B158DRAFT_2164at 305.522 kb on + strand, within B158DRAFT_2164at 305.522 kb on + strand, within B158DRAFT_2164at 305.530 kb on - strand, within B158DRAFT_2164at 305.530 kb on - strand, within B158DRAFT_2164at 305.557 kb on + strand, within B158DRAFT_2164at 305.575 kb on - strand, within B158DRAFT_2164at 305.595 kb on + strand, within B158DRAFT_2164at 305.595 kb on + strand, within B158DRAFT_2164at 305.603 kb on - strand, within B158DRAFT_2164at 305.608 kb on - strand, within B158DRAFT_2164at 305.608 kb on - strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.630 kb on - strand, within B158DRAFT_2164at 305.654 kb on + strand, within B158DRAFT_2164at 305.662 kb on - strand, within B158DRAFT_2164at 305.662 kb on - strand, within B158DRAFT_2164at 305.738 kb on + strand, within B158DRAFT_2164at 305.738 kb on + strand, within B158DRAFT_2164at 305.746 kb on - strand, within B158DRAFT_2164at 305.746 kb on - strand, within B158DRAFT_2164at 305.878 kb on + strand, within B158DRAFT_2164at 305.936 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.948 kb on + strand, within B158DRAFT_2164at 305.957 kb on - strand, within B158DRAFT_2164

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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302,616 + +0.2
302,635 - -0.2
302,635 - +0.1
302,635 - -0.4
302,637 + -0.2
302,669 - -0.1
302,693 + -0.1
302,695 - -0.3
302,702 - +0.2
302,702 - -0.0
302,702 - +0.2
302,702 - -1.1
302,702 - -0.1
302,723 + -0.2
302,727 - +0.0
302,799 - B158DRAFT_2162 0.14 +0.0
302,799 - B158DRAFT_2162 0.14 -0.4
302,799 - B158DRAFT_2162 0.14 +0.1
302,799 - B158DRAFT_2162 0.14 -0.1
302,801 + B158DRAFT_2162 0.15 -0.2
302,835 + B158DRAFT_2162 0.19 -0.3
302,842 + B158DRAFT_2162 0.20 -0.1
302,843 - B158DRAFT_2162 0.20 -0.2
302,849 - B158DRAFT_2162 0.21 -0.3
302,967 - B158DRAFT_2162 0.38 +0.0
302,981 + B158DRAFT_2162 0.40 +0.1
302,981 + B158DRAFT_2162 0.40 -0.1
302,981 + B158DRAFT_2162 0.40 -0.0
302,981 + B158DRAFT_2162 0.40 -0.5
302,981 + B158DRAFT_2162 0.40 -1.0
302,981 + B158DRAFT_2162 0.40 +0.3
302,981 + B158DRAFT_2162 0.40 +0.2
302,981 + B158DRAFT_2162 0.40 -0.4
302,981 + B158DRAFT_2162 0.40 +0.1
302,981 + B158DRAFT_2162 0.40 -0.2
302,989 - B158DRAFT_2162 0.41 -1.7
302,989 - B158DRAFT_2162 0.41 +0.3
302,989 - B158DRAFT_2162 0.41 -0.9
302,989 - B158DRAFT_2162 0.41 +0.1
302,989 - B158DRAFT_2162 0.41 -0.3
302,989 - B158DRAFT_2162 0.41 +0.0
302,989 - B158DRAFT_2162 0.41 -0.4
302,989 - B158DRAFT_2162 0.41 -0.2
303,032 - B158DRAFT_2162 0.47 -0.2
303,052 + B158DRAFT_2162 0.50 -0.3
303,140 + B158DRAFT_2162 0.62 -0.1
303,140 + B158DRAFT_2162 0.62 +0.1
303,140 + B158DRAFT_2162 0.62 +0.1
303,188 + B158DRAFT_2162 0.69 +0.1
303,255 + B158DRAFT_2162 0.78 -0.2
303,283 - B158DRAFT_2162 0.82 +1.0
303,310 + B158DRAFT_2162 0.86 +0.3
303,318 - B158DRAFT_2162 0.87 +0.1
303,554 + -0.2
303,561 + -0.5
303,562 - -0.0
303,562 - -0.7
303,562 - -0.4
303,562 - -0.3
303,562 - -0.7
303,562 - -0.4
303,568 - +0.3
303,568 - -0.2
303,627 + -1.1
303,627 + -0.4
303,627 + -0.1
303,744 + B158DRAFT_2163 0.14 -1.3
303,754 + B158DRAFT_2163 0.15 -0.3
303,754 + B158DRAFT_2163 0.15 -0.5
303,818 + B158DRAFT_2163 0.20 -0.1
303,833 - B158DRAFT_2163 0.21 +0.2
303,838 - B158DRAFT_2163 0.21 -0.3
303,934 + B158DRAFT_2163 0.28 -0.4
303,942 - B158DRAFT_2163 0.28 -1.3
303,983 + B158DRAFT_2163 0.31 -0.5
303,983 + B158DRAFT_2163 0.31 +0.0
304,094 + B158DRAFT_2163 0.39 -0.7
304,129 - B158DRAFT_2163 0.41 -0.4
304,129 - B158DRAFT_2163 0.41 -0.2
304,223 - B158DRAFT_2163 0.48 +0.3
304,261 + B158DRAFT_2163 0.50 -0.3
304,261 + B158DRAFT_2163 0.50 +0.2
304,405 + B158DRAFT_2163 0.60 -1.0
304,422 + B158DRAFT_2163 0.61 -0.2
304,466 + B158DRAFT_2163 0.65 +0.5
304,533 - B158DRAFT_2163 0.69 -0.9
304,555 + B158DRAFT_2163 0.71 -0.1
304,563 - B158DRAFT_2163 0.71 -0.7
304,564 + B158DRAFT_2163 0.71 -0.0
304,760 + B158DRAFT_2163 0.85 -0.1
304,818 + B158DRAFT_2163 0.89 +0.1
304,836 + +0.1
305,001 - -0.5
305,111 + -0.7
305,140 + -0.3
305,140 + +0.2
305,203 - -0.7
305,210 + +0.1
305,210 + -1.0
305,218 - -0.6
305,436 + B158DRAFT_2164 0.17 -0.8
305,454 - B158DRAFT_2164 0.18 -0.7
305,522 + B158DRAFT_2164 0.21 -0.4
305,522 + B158DRAFT_2164 0.21 -0.3
305,522 + B158DRAFT_2164 0.21 -0.5
305,530 - B158DRAFT_2164 0.22 -0.2
305,530 - B158DRAFT_2164 0.22 -0.3
305,557 + B158DRAFT_2164 0.23 -0.0
305,575 - B158DRAFT_2164 0.24 -1.0
305,595 + B158DRAFT_2164 0.25 -0.8
305,595 + B158DRAFT_2164 0.25 -0.2
305,603 - B158DRAFT_2164 0.25 -0.4
305,608 - B158DRAFT_2164 0.25 -0.1
305,608 - B158DRAFT_2164 0.25 -0.2
305,622 + B158DRAFT_2164 0.26 -0.6
305,622 + B158DRAFT_2164 0.26 -0.5
305,622 + B158DRAFT_2164 0.26 -0.7
305,622 + B158DRAFT_2164 0.26 +0.0
305,630 - B158DRAFT_2164 0.26 -0.2
305,654 + B158DRAFT_2164 0.27 -0.4
305,662 - B158DRAFT_2164 0.28 +0.1
305,662 - B158DRAFT_2164 0.28 -0.4
305,738 + B158DRAFT_2164 0.31 -0.4
305,738 + B158DRAFT_2164 0.31 -0.4
305,746 - B158DRAFT_2164 0.31 -0.2
305,746 - B158DRAFT_2164 0.31 -0.8
305,878 + B158DRAFT_2164 0.37 -0.3
305,936 + B158DRAFT_2164 0.40 +1.1
305,942 + B158DRAFT_2164 0.40 -0.9
305,942 + B158DRAFT_2164 0.40 -0.5
305,942 + B158DRAFT_2164 0.40 -0.6
305,942 + B158DRAFT_2164 0.40 -0.1
305,948 + B158DRAFT_2164 0.41 +0.0
305,957 - B158DRAFT_2164 0.41 -0.4

Or see this region's nucleotide sequence