Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2002 and B158DRAFT_2003 are separated by 14 nucleotides B158DRAFT_2003 and B158DRAFT_2004 are separated by 25 nucleotides B158DRAFT_2004 and B158DRAFT_2005 are separated by 140 nucleotides B158DRAFT_2005 and B158DRAFT_2006 are separated by 23 nucleotides B158DRAFT_2006 and B158DRAFT_2007 are separated by 50 nucleotides B158DRAFT_2007 and B158DRAFT_2008 overlap by 4 nucleotides
B158DRAFT_2002: B158DRAFT_2002 - ribosomal protein S6, at 136,988 to 137,386
_2002
B158DRAFT_2003: B158DRAFT_2003 - ribosomal protein S18, at 137,401 to 137,628
_2003
B158DRAFT_2004: B158DRAFT_2004 - LSU ribosomal protein L9P, at 137,654 to 138,109
_2004
B158DRAFT_2005: B158DRAFT_2005 - hypothetical protein, at 138,250 to 139,080
_2005
B158DRAFT_2006: B158DRAFT_2006 - Uncharacterized conserved protein, at 139,104 to 139,502
_2006
B158DRAFT_2007: B158DRAFT_2007 - hypothetical protein, at 139,553 to 139,975
_2007
B158DRAFT_2008: B158DRAFT_2008 - Uncharacterized protein conserved in bacteria, at 139,972 to 140,370
_2008
Position (kb)
138
139
140 Strain fitness (log2 ratio)
-2
-1
0
1 at 137.729 kb on + strand, within B158DRAFT_2004 at 137.760 kb on - strand, within B158DRAFT_2004 at 137.800 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.854 kb on - strand, within B158DRAFT_2004 at 137.854 kb on - strand, within B158DRAFT_2004 at 137.864 kb on - strand, within B158DRAFT_2004 at 137.896 kb on - strand, within B158DRAFT_2004 at 137.934 kb on + strand, within B158DRAFT_2004 at 137.971 kb on - strand, within B158DRAFT_2004 at 138.112 kb on - strand at 138.120 kb on - strand at 138.215 kb on + strand at 138.345 kb on - strand, within B158DRAFT_2005 at 138.381 kb on + strand, within B158DRAFT_2005 at 138.422 kb on + strand, within B158DRAFT_2005 at 138.441 kb on + strand, within B158DRAFT_2005 at 138.529 kb on - strand, within B158DRAFT_2005 at 138.536 kb on - strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.579 kb on + strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.587 kb on - strand, within B158DRAFT_2005 at 138.597 kb on - strand, within B158DRAFT_2005 at 138.615 kb on - strand, within B158DRAFT_2005 at 138.629 kb on + strand, within B158DRAFT_2005 at 138.629 kb on + strand, within B158DRAFT_2005 at 138.637 kb on - strand, within B158DRAFT_2005 at 138.724 kb on + strand, within B158DRAFT_2005 at 138.724 kb on + strand, within B158DRAFT_2005 at 138.807 kb on + strand, within B158DRAFT_2005 at 138.807 kb on + strand, within B158DRAFT_2005 at 138.815 kb on - strand, within B158DRAFT_2005 at 138.815 kb on - strand, within B158DRAFT_2005 at 138.826 kb on + strand, within B158DRAFT_2005 at 138.838 kb on + strand, within B158DRAFT_2005 at 138.953 kb on + strand, within B158DRAFT_2005 at 138.953 kb on + strand, within B158DRAFT_2005 at 138.958 kb on + strand, within B158DRAFT_2005 at 138.958 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.961 kb on - strand, within B158DRAFT_2005 at 138.978 kb on + strand, within B158DRAFT_2005 at 138.986 kb on - strand, within B158DRAFT_2005 at 138.986 kb on - strand, within B158DRAFT_2005 at 139.040 kb on + strand at 139.168 kb on + strand, within B158DRAFT_2006 at 139.207 kb on - strand, within B158DRAFT_2006 at 139.215 kb on + strand, within B158DRAFT_2006 at 139.223 kb on - strand, within B158DRAFT_2006 at 139.257 kb on + strand, within B158DRAFT_2006 at 139.350 kb on + strand, within B158DRAFT_2006 at 139.350 kb on + strand, within B158DRAFT_2006 at 139.358 kb on - strand, within B158DRAFT_2006 at 139.374 kb on + strand, within B158DRAFT_2006 at 139.384 kb on - strand, within B158DRAFT_2006 at 139.384 kb on - strand, within B158DRAFT_2006 at 139.661 kb on + strand, within B158DRAFT_2007 at 139.673 kb on + strand, within B158DRAFT_2007 at 139.673 kb on + strand, within B158DRAFT_2007 at 139.673 kb on + strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.681 kb on - strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.683 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.688 kb on + strand, within B158DRAFT_2007 at 139.691 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.696 kb on - strand, within B158DRAFT_2007 at 139.753 kb on - strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.827 kb on + strand, within B158DRAFT_2007 at 139.835 kb on - strand, within B158DRAFT_2007 at 139.835 kb on - strand, within B158DRAFT_2007 at 139.884 kb on + strand, within B158DRAFT_2007 at 139.884 kb on + strand, within B158DRAFT_2007 at 139.892 kb on - strand, within B158DRAFT_2007 at 139.898 kb on + strand, within B158DRAFT_2007 at 139.912 kb on - strand, within B158DRAFT_2007 at 140.007 kb on - strand at 140.014 kb on + strand, within B158DRAFT_2008 at 140.020 kb on - strand, within B158DRAFT_2008 at 140.044 kb on + strand, within B158DRAFT_2008 at 140.052 kb on - strand, within B158DRAFT_2008
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 137,729 + B158DRAFT_2004 0.16 -0.7 137,760 - B158DRAFT_2004 0.23 -0.4 137,800 + B158DRAFT_2004 0.32 -0.5 137,846 + B158DRAFT_2004 0.42 -1.0 137,846 + B158DRAFT_2004 0.42 -0.6 137,846 + B158DRAFT_2004 0.42 -1.5 137,854 - B158DRAFT_2004 0.44 -1.9 137,854 - B158DRAFT_2004 0.44 -0.6 137,864 - B158DRAFT_2004 0.46 -1.8 137,896 - B158DRAFT_2004 0.53 -0.4 137,934 + B158DRAFT_2004 0.61 +0.0 137,971 - B158DRAFT_2004 0.70 -0.5 138,112 - -1.0 138,120 - -0.6 138,215 + -0.9 138,345 - B158DRAFT_2005 0.11 -0.6 138,381 + B158DRAFT_2005 0.16 -0.1 138,422 + B158DRAFT_2005 0.21 -0.7 138,441 + B158DRAFT_2005 0.23 +0.5 138,529 - B158DRAFT_2005 0.34 -0.2 138,536 - B158DRAFT_2005 0.34 -0.4 138,579 + B158DRAFT_2005 0.40 +0.3 138,579 + B158DRAFT_2005 0.40 -0.9 138,579 + B158DRAFT_2005 0.40 +0.1 138,579 + B158DRAFT_2005 0.40 +0.4 138,579 + B158DRAFT_2005 0.40 +0.3 138,587 - B158DRAFT_2005 0.41 -0.1 138,587 - B158DRAFT_2005 0.41 +0.2 138,587 - B158DRAFT_2005 0.41 -0.3 138,597 - B158DRAFT_2005 0.42 -0.2 138,615 - B158DRAFT_2005 0.44 -0.6 138,629 + B158DRAFT_2005 0.46 -0.6 138,629 + B158DRAFT_2005 0.46 +0.2 138,637 - B158DRAFT_2005 0.47 -0.1 138,724 + B158DRAFT_2005 0.57 -0.1 138,724 + B158DRAFT_2005 0.57 -0.3 138,807 + B158DRAFT_2005 0.67 -0.1 138,807 + B158DRAFT_2005 0.67 -0.1 138,815 - B158DRAFT_2005 0.68 +0.1 138,815 - B158DRAFT_2005 0.68 -0.6 138,826 + B158DRAFT_2005 0.69 -0.0 138,838 + B158DRAFT_2005 0.71 -0.0 138,953 + B158DRAFT_2005 0.85 -0.8 138,953 + B158DRAFT_2005 0.85 +0.2 138,958 + B158DRAFT_2005 0.85 +0.4 138,958 - B158DRAFT_2005 0.85 +0.5 138,961 - B158DRAFT_2005 0.86 -0.3 138,961 - B158DRAFT_2005 0.86 -1.5 138,961 - B158DRAFT_2005 0.86 +0.5 138,978 + B158DRAFT_2005 0.88 -0.4 138,986 - B158DRAFT_2005 0.89 -0.1 138,986 - B158DRAFT_2005 0.89 +0.1 139,040 + -0.2 139,168 + B158DRAFT_2006 0.16 -0.0 139,207 - B158DRAFT_2006 0.26 -0.5 139,215 + B158DRAFT_2006 0.28 -0.7 139,223 - B158DRAFT_2006 0.30 -0.1 139,257 + B158DRAFT_2006 0.38 -0.0 139,350 + B158DRAFT_2006 0.62 -0.5 139,350 + B158DRAFT_2006 0.62 -0.1 139,358 - B158DRAFT_2006 0.64 -0.2 139,374 + B158DRAFT_2006 0.68 -0.1 139,384 - B158DRAFT_2006 0.70 +0.4 139,384 - B158DRAFT_2006 0.70 +0.5 139,661 + B158DRAFT_2007 0.26 +0.0 139,673 + B158DRAFT_2007 0.28 -0.0 139,673 + B158DRAFT_2007 0.28 +0.3 139,673 + B158DRAFT_2007 0.28 -0.1 139,681 - B158DRAFT_2007 0.30 -0.5 139,681 - B158DRAFT_2007 0.30 -0.2 139,681 - B158DRAFT_2007 0.30 -0.3 139,681 - B158DRAFT_2007 0.30 -0.4 139,681 - B158DRAFT_2007 0.30 -1.0 139,681 - B158DRAFT_2007 0.30 +0.0 139,681 - B158DRAFT_2007 0.30 +0.8 139,683 + B158DRAFT_2007 0.31 -0.3 139,683 + B158DRAFT_2007 0.31 -0.7 139,683 + B158DRAFT_2007 0.31 -0.1 139,683 + B158DRAFT_2007 0.31 +0.1 139,683 + B158DRAFT_2007 0.31 -0.5 139,683 + B158DRAFT_2007 0.31 +0.6 139,683 + B158DRAFT_2007 0.31 -0.1 139,683 + B158DRAFT_2007 0.31 +0.3 139,688 + B158DRAFT_2007 0.32 -1.0 139,688 + B158DRAFT_2007 0.32 -0.2 139,688 + B158DRAFT_2007 0.32 -0.1 139,688 + B158DRAFT_2007 0.32 +0.0 139,688 + B158DRAFT_2007 0.32 -0.3 139,688 + B158DRAFT_2007 0.32 -0.5 139,691 - B158DRAFT_2007 0.33 +0.4 139,696 - B158DRAFT_2007 0.34 -0.6 139,696 - B158DRAFT_2007 0.34 +0.5 139,696 - B158DRAFT_2007 0.34 +0.4 139,696 - B158DRAFT_2007 0.34 -0.0 139,696 - B158DRAFT_2007 0.34 -0.3 139,696 - B158DRAFT_2007 0.34 -0.9 139,696 - B158DRAFT_2007 0.34 +0.3 139,753 - B158DRAFT_2007 0.47 -0.4 139,827 + B158DRAFT_2007 0.65 +0.1 139,827 + B158DRAFT_2007 0.65 +0.4 139,827 + B158DRAFT_2007 0.65 -0.0 139,827 + B158DRAFT_2007 0.65 +0.3 139,835 - B158DRAFT_2007 0.67 -0.0 139,835 - B158DRAFT_2007 0.67 -0.5 139,884 + B158DRAFT_2007 0.78 -0.7 139,884 + B158DRAFT_2007 0.78 +0.1 139,892 - B158DRAFT_2007 0.80 -0.5 139,898 + B158DRAFT_2007 0.82 -0.4 139,912 - B158DRAFT_2007 0.85 +0.3 140,007 - +0.1 140,014 + B158DRAFT_2008 0.11 -0.7 140,020 - B158DRAFT_2008 0.12 -0.1 140,044 + B158DRAFT_2008 0.18 +0.2 140,052 - B158DRAFT_2008 0.20 -0.3
Or see this region's nucleotide sequence