Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0856 and B158DRAFT_0857 are separated by 144 nucleotides B158DRAFT_0857 and B158DRAFT_0858 are separated by 169 nucleotides
B158DRAFT_0856: B158DRAFT_0856 - hypothetical protein, at 875,421 to 875,960
_0856
B158DRAFT_0857: B158DRAFT_0857 - Acetyltransferase (GNAT) family., at 876,105 to 876,578
_0857
B158DRAFT_0858: B158DRAFT_0858 - Na+/H+ antiporter, at 876,748 to 878,130
_0858
Position (kb) 876
877 Strain fitness (log2 ratio) -2
-1
0
1
2 at 875.106 kb on + strand at 875.113 kb on + strand at 875.113 kb on + strand at 875.121 kb on - strand at 875.121 kb on - strand at 875.125 kb on + strand at 875.125 kb on + strand at 875.125 kb on + strand at 875.125 kb on + strand at 875.125 kb on + strand at 875.125 kb on + strand at 875.125 kb on + strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.133 kb on - strand at 875.140 kb on - strand at 875.140 kb on - strand at 875.174 kb on - strand at 875.179 kb on - strand at 875.191 kb on + strand at 875.201 kb on + strand at 875.216 kb on + strand at 875.216 kb on + strand at 875.224 kb on - strand at 875.224 kb on - strand at 875.243 kb on + strand at 875.276 kb on + strand at 875.276 kb on + strand at 875.371 kb on + strand at 875.371 kb on + strand at 875.372 kb on - strand at 875.379 kb on - strand at 875.379 kb on - strand at 875.379 kb on - strand at 875.404 kb on + strand at 875.410 kb on + strand at 875.435 kb on - strand at 875.444 kb on + strand at 875.444 kb on + strand at 875.480 kb on + strand, within B158DRAFT_0856 at 875.494 kb on + strand, within B158DRAFT_0856 at 875.502 kb on - strand, within B158DRAFT_0856 at 875.502 kb on - strand, within B158DRAFT_0856 at 875.512 kb on + strand, within B158DRAFT_0856 at 875.526 kb on - strand, within B158DRAFT_0856 at 875.537 kb on + strand, within B158DRAFT_0856 at 875.537 kb on + strand, within B158DRAFT_0856 at 875.542 kb on + strand, within B158DRAFT_0856 at 875.547 kb on + strand, within B158DRAFT_0856 at 875.547 kb on + strand, within B158DRAFT_0856 at 875.547 kb on + strand, within B158DRAFT_0856 at 875.547 kb on + strand, within B158DRAFT_0856 at 875.547 kb on + strand, within B158DRAFT_0856 at 875.547 kb on + strand, within B158DRAFT_0856 at 875.550 kb on - strand, within B158DRAFT_0856 at 875.550 kb on - strand, within B158DRAFT_0856 at 875.555 kb on - strand, within B158DRAFT_0856 at 875.555 kb on - strand, within B158DRAFT_0856 at 875.555 kb on - strand, within B158DRAFT_0856 at 875.555 kb on - strand, within B158DRAFT_0856 at 875.576 kb on + strand, within B158DRAFT_0856 at 875.576 kb on + strand, within B158DRAFT_0856 at 875.581 kb on + strand, within B158DRAFT_0856 at 875.581 kb on + strand, within B158DRAFT_0856 at 875.581 kb on + strand, within B158DRAFT_0856 at 875.589 kb on - strand, within B158DRAFT_0856 at 875.589 kb on - strand, within B158DRAFT_0856 at 875.589 kb on - strand, within B158DRAFT_0856 at 875.589 kb on - strand, within B158DRAFT_0856 at 875.644 kb on - strand, within B158DRAFT_0856 at 875.649 kb on - strand, within B158DRAFT_0856 at 875.649 kb on - strand, within B158DRAFT_0856 at 875.780 kb on + strand, within B158DRAFT_0856 at 875.780 kb on + strand, within B158DRAFT_0856 at 875.788 kb on - strand, within B158DRAFT_0856 at 875.818 kb on - strand, within B158DRAFT_0856 at 875.846 kb on + strand, within B158DRAFT_0856 at 875.846 kb on + strand, within B158DRAFT_0856 at 875.851 kb on + strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.856 kb on - strand, within B158DRAFT_0856 at 875.918 kb on + strand at 875.918 kb on + strand at 875.918 kb on + strand at 875.921 kb on - strand at 875.926 kb on + strand at 875.926 kb on - strand at 875.934 kb on - strand at 875.934 kb on - strand at 875.934 kb on - strand at 875.934 kb on - strand at 875.936 kb on + strand at 875.936 kb on + strand at 875.936 kb on + strand at 875.936 kb on + strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.989 kb on - strand at 876.010 kb on + strand at 876.018 kb on - strand at 876.151 kb on - strand at 876.151 kb on - strand at 876.151 kb on - strand at 876.153 kb on + strand, within B158DRAFT_0857 at 876.178 kb on + strand, within B158DRAFT_0857 at 876.187 kb on + strand, within B158DRAFT_0857 at 876.187 kb on + strand, within B158DRAFT_0857 at 876.276 kb on - strand, within B158DRAFT_0857 at 876.276 kb on - strand, within B158DRAFT_0857 at 876.291 kb on - strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.312 kb on + strand, within B158DRAFT_0857 at 876.313 kb on + strand, within B158DRAFT_0857 at 876.321 kb on - strand, within B158DRAFT_0857 at 876.321 kb on - strand, within B158DRAFT_0857 at 876.384 kb on + strand, within B158DRAFT_0857 at 876.419 kb on - strand, within B158DRAFT_0857 at 876.447 kb on - strand, within B158DRAFT_0857 at 876.454 kb on + strand, within B158DRAFT_0857 at 876.454 kb on + strand, within B158DRAFT_0857 at 876.454 kb on + strand, within B158DRAFT_0857 at 876.455 kb on - strand, within B158DRAFT_0857 at 876.462 kb on - strand, within B158DRAFT_0857 at 876.462 kb on - strand, within B158DRAFT_0857 at 876.462 kb on - strand, within B158DRAFT_0857 at 876.464 kb on + strand, within B158DRAFT_0857 at 876.482 kb on + strand, within B158DRAFT_0857 at 876.530 kb on - strand, within B158DRAFT_0857 at 876.546 kb on + strand at 876.546 kb on + strand at 876.638 kb on + strand at 876.638 kb on + strand at 876.646 kb on - strand at 876.648 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.671 kb on - strand at 876.780 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.847 kb on + strand at 876.907 kb on - strand, within B158DRAFT_0858 at 877.051 kb on - strand, within B158DRAFT_0858 at 877.061 kb on - strand, within B158DRAFT_0858 at 877.145 kb on + strand, within B158DRAFT_0858 at 877.145 kb on + strand, within B158DRAFT_0858 at 877.145 kb on + strand, within B158DRAFT_0858 at 877.148 kb on - strand, within B158DRAFT_0858 at 877.153 kb on - strand, within B158DRAFT_0858 at 877.153 kb on - strand, within B158DRAFT_0858 at 877.153 kb on - strand, within B158DRAFT_0858 at 877.154 kb on - strand, within B158DRAFT_0858 at 877.172 kb on + strand, within B158DRAFT_0858 at 877.219 kb on + strand, within B158DRAFT_0858 at 877.233 kb on + strand, within B158DRAFT_0858 at 877.275 kb on + strand, within B158DRAFT_0858 at 877.298 kb on - strand, within B158DRAFT_0858 at 877.298 kb on - strand, within B158DRAFT_0858 at 877.298 kb on - strand, within B158DRAFT_0858 at 877.340 kb on + strand, within B158DRAFT_0858 at 877.394 kb on + strand, within B158DRAFT_0858 at 877.484 kb on - strand, within B158DRAFT_0858 at 877.484 kb on - strand, within B158DRAFT_0858 at 877.486 kb on - strand, within B158DRAFT_0858 at 877.491 kb on + strand, within B158DRAFT_0858 at 877.528 kb on - strand, within B158DRAFT_0858
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 875,106 + +0.3 875,113 + +0.2 875,113 + +0.2 875,121 - +0.4 875,121 - -0.0 875,125 + +0.3 875,125 + -0.5 875,125 + -0.4 875,125 + -0.1 875,125 + -0.6 875,125 + +0.1 875,125 + -0.0 875,133 - -0.5 875,133 - +0.1 875,133 - -0.0 875,133 - -0.9 875,133 - -0.7 875,133 - -0.4 875,133 - +0.3 875,133 - -0.2 875,133 - +0.2 875,133 - -0.3 875,140 - -1.0 875,140 - +0.0 875,174 - -0.2 875,179 - +0.2 875,191 + -0.7 875,201 + +0.0 875,216 + -1.2 875,216 + +0.2 875,224 - -0.6 875,224 - +0.1 875,243 + -0.8 875,276 + -0.9 875,276 + -0.2 875,371 + -0.0 875,371 + -0.4 875,372 - +0.2 875,379 - -0.0 875,379 - +0.6 875,379 - -0.0 875,404 + +0.0 875,410 + -0.6 875,435 - -0.2 875,444 + -0.0 875,444 + +0.1 875,480 + B158DRAFT_0856 0.11 -0.6 875,494 + B158DRAFT_0856 0.14 -2.0 875,502 - B158DRAFT_0856 0.15 +0.1 875,502 - B158DRAFT_0856 0.15 +0.1 875,512 + B158DRAFT_0856 0.17 +0.0 875,526 - B158DRAFT_0856 0.19 +0.3 875,537 + B158DRAFT_0856 0.21 +0.1 875,537 + B158DRAFT_0856 0.21 +1.0 875,542 + B158DRAFT_0856 0.22 +0.1 875,547 + B158DRAFT_0856 0.23 -0.1 875,547 + B158DRAFT_0856 0.23 +0.1 875,547 + B158DRAFT_0856 0.23 +0.2 875,547 + B158DRAFT_0856 0.23 +0.3 875,547 + B158DRAFT_0856 0.23 -0.3 875,547 + B158DRAFT_0856 0.23 +0.7 875,550 - B158DRAFT_0856 0.24 -0.2 875,550 - B158DRAFT_0856 0.24 -0.1 875,555 - B158DRAFT_0856 0.25 -0.6 875,555 - B158DRAFT_0856 0.25 -0.4 875,555 - B158DRAFT_0856 0.25 +0.7 875,555 - B158DRAFT_0856 0.25 -0.4 875,576 + B158DRAFT_0856 0.29 -0.1 875,576 + B158DRAFT_0856 0.29 +0.4 875,581 + B158DRAFT_0856 0.30 -0.3 875,581 + B158DRAFT_0856 0.30 -0.4 875,581 + B158DRAFT_0856 0.30 +0.7 875,589 - B158DRAFT_0856 0.31 +0.0 875,589 - B158DRAFT_0856 0.31 +0.1 875,589 - B158DRAFT_0856 0.31 -0.3 875,589 - B158DRAFT_0856 0.31 -0.2 875,644 - B158DRAFT_0856 0.41 -0.1 875,649 - B158DRAFT_0856 0.42 +0.2 875,649 - B158DRAFT_0856 0.42 +0.3 875,780 + B158DRAFT_0856 0.66 +0.6 875,780 + B158DRAFT_0856 0.66 -0.1 875,788 - B158DRAFT_0856 0.68 +0.2 875,818 - B158DRAFT_0856 0.74 +0.0 875,846 + B158DRAFT_0856 0.79 +0.4 875,846 + B158DRAFT_0856 0.79 -0.7 875,851 + B158DRAFT_0856 0.80 +0.5 875,854 - B158DRAFT_0856 0.80 -0.3 875,854 - B158DRAFT_0856 0.80 -0.2 875,854 - B158DRAFT_0856 0.80 +0.8 875,854 - B158DRAFT_0856 0.80 +0.4 875,856 - B158DRAFT_0856 0.81 +0.2 875,918 + -1.5 875,918 + -0.2 875,918 + -0.2 875,921 - +0.3 875,926 + -0.7 875,926 - -0.3 875,934 - -0.5 875,934 - +1.0 875,934 - -0.1 875,934 - -0.3 875,936 + +0.3 875,936 + +0.1 875,936 + -0.1 875,936 + -0.1 875,944 - +0.1 875,944 - +0.1 875,944 - +0.2 875,944 - +0.9 875,944 - -0.1 875,989 - -0.2 876,010 + -0.4 876,018 - -0.1 876,151 - -0.5 876,151 - -1.7 876,151 - -1.2 876,153 + B158DRAFT_0857 0.10 +0.5 876,178 + B158DRAFT_0857 0.15 -0.7 876,187 + B158DRAFT_0857 0.17 -1.2 876,187 + B158DRAFT_0857 0.17 -0.5 876,276 - B158DRAFT_0857 0.36 -1.9 876,276 - B158DRAFT_0857 0.36 -0.3 876,291 - B158DRAFT_0857 0.39 -0.6 876,293 + B158DRAFT_0857 0.40 -0.7 876,293 + B158DRAFT_0857 0.40 -0.6 876,293 + B158DRAFT_0857 0.40 -0.8 876,293 + B158DRAFT_0857 0.40 -0.3 876,293 + B158DRAFT_0857 0.40 -0.2 876,301 - B158DRAFT_0857 0.41 -1.0 876,301 - B158DRAFT_0857 0.41 -0.7 876,301 - B158DRAFT_0857 0.41 -0.8 876,301 - B158DRAFT_0857 0.41 -1.0 876,301 - B158DRAFT_0857 0.41 -1.4 876,301 - B158DRAFT_0857 0.41 -0.9 876,301 - B158DRAFT_0857 0.41 -0.4 876,312 + B158DRAFT_0857 0.44 -1.6 876,313 + B158DRAFT_0857 0.44 -0.3 876,321 - B158DRAFT_0857 0.46 -1.0 876,321 - B158DRAFT_0857 0.46 -0.9 876,384 + B158DRAFT_0857 0.59 +0.1 876,419 - B158DRAFT_0857 0.66 -0.4 876,447 - B158DRAFT_0857 0.72 -1.3 876,454 + B158DRAFT_0857 0.74 -0.9 876,454 + B158DRAFT_0857 0.74 -0.7 876,454 + B158DRAFT_0857 0.74 +0.2 876,455 - B158DRAFT_0857 0.74 -0.8 876,462 - B158DRAFT_0857 0.75 -1.4 876,462 - B158DRAFT_0857 0.75 -0.2 876,462 - B158DRAFT_0857 0.75 -0.9 876,464 + B158DRAFT_0857 0.76 -0.3 876,482 + B158DRAFT_0857 0.80 -0.7 876,530 - B158DRAFT_0857 0.90 -0.2 876,546 + -0.4 876,546 + -0.6 876,638 + -0.4 876,638 + +0.4 876,646 - +0.1 876,648 + +0.2 876,653 + +0.2 876,653 + +0.0 876,653 + +0.1 876,653 + +0.1 876,653 + +0.1 876,653 + -0.1 876,653 + +0.6 876,653 + -0.2 876,661 - -0.1 876,661 - -0.1 876,661 - +0.1 876,661 - +0.7 876,661 - +0.8 876,661 - -0.1 876,661 - -0.0 876,661 - +0.1 876,661 - +0.0 876,671 - -0.7 876,780 + -0.7 876,821 + +0.7 876,821 + +1.1 876,821 + +1.8 876,821 + +0.1 876,821 + +0.2 876,821 + -0.1 876,829 - -0.6 876,829 - +0.4 876,829 - -0.0 876,829 - -0.2 876,829 - +0.9 876,829 - -0.4 876,829 - +0.1 876,829 - +0.2 876,847 + -0.5 876,907 - B158DRAFT_0858 0.11 -1.1 877,051 - B158DRAFT_0858 0.22 +0.6 877,061 - B158DRAFT_0858 0.23 +0.5 877,145 + B158DRAFT_0858 0.29 -0.3 877,145 + B158DRAFT_0858 0.29 +0.2 877,145 + B158DRAFT_0858 0.29 +0.1 877,148 - B158DRAFT_0858 0.29 -0.6 877,153 - B158DRAFT_0858 0.29 +0.0 877,153 - B158DRAFT_0858 0.29 -0.3 877,153 - B158DRAFT_0858 0.29 +0.2 877,154 - B158DRAFT_0858 0.29 -0.4 877,172 + B158DRAFT_0858 0.31 +0.1 877,219 + B158DRAFT_0858 0.34 +0.3 877,233 + B158DRAFT_0858 0.35 +0.4 877,275 + B158DRAFT_0858 0.38 -0.1 877,298 - B158DRAFT_0858 0.40 -0.1 877,298 - B158DRAFT_0858 0.40 -0.0 877,298 - B158DRAFT_0858 0.40 -0.1 877,340 + B158DRAFT_0858 0.43 +0.0 877,394 + B158DRAFT_0858 0.47 -0.1 877,484 - B158DRAFT_0858 0.53 -0.1 877,484 - B158DRAFT_0858 0.53 +0.1 877,486 - B158DRAFT_0858 0.53 +0.6 877,491 + B158DRAFT_0858 0.54 -0.5 877,528 - B158DRAFT_0858 0.56 +0.7
Or see this region's nucleotide sequence