Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0155 and B158DRAFT_0156 are separated by 227 nucleotides B158DRAFT_0156 and B158DRAFT_0157 are separated by 394 nucleotides B158DRAFT_0157 and B158DRAFT_0158 are separated by 12 nucleotides
B158DRAFT_0155: B158DRAFT_0155 - Permeases of the drug/metabolite transporter (DMT) superfamily, at 153,026 to 154,012
_0155
B158DRAFT_0156: B158DRAFT_0156 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 154,240 to 154,950
_0156
B158DRAFT_0157: B158DRAFT_0157 - 3-dehydroquinate dehydratase (EC 4.2.1.10), at 155,345 to 155,785
_0157
B158DRAFT_0158: B158DRAFT_0158 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 155,798 to 156,256
_0158
Position (kb) 154
155 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 153.261 kb on + strand, within B158DRAFT_0155 at 153.316 kb on - strand, within B158DRAFT_0155 at 153.350 kb on + strand, within B158DRAFT_0155 at 153.358 kb on - strand, within B158DRAFT_0155 at 153.373 kb on + strand, within B158DRAFT_0155 at 153.373 kb on + strand, within B158DRAFT_0155 at 153.381 kb on - strand, within B158DRAFT_0155 at 153.381 kb on - strand, within B158DRAFT_0155 at 153.381 kb on - strand, within B158DRAFT_0155 at 153.381 kb on - strand, within B158DRAFT_0155 at 153.395 kb on - strand, within B158DRAFT_0155 at 153.397 kb on + strand, within B158DRAFT_0155 at 153.431 kb on - strand, within B158DRAFT_0155 at 153.458 kb on - strand, within B158DRAFT_0155 at 153.581 kb on + strand, within B158DRAFT_0155 at 153.586 kb on + strand, within B158DRAFT_0155 at 153.586 kb on + strand, within B158DRAFT_0155 at 153.613 kb on + strand, within B158DRAFT_0155 at 153.613 kb on + strand, within B158DRAFT_0155 at 153.618 kb on - strand, within B158DRAFT_0155 at 153.621 kb on - strand, within B158DRAFT_0155 at 153.621 kb on - strand, within B158DRAFT_0155 at 153.723 kb on - strand, within B158DRAFT_0155 at 153.729 kb on + strand, within B158DRAFT_0155 at 153.729 kb on + strand, within B158DRAFT_0155 at 153.747 kb on - strand, within B158DRAFT_0155 at 153.769 kb on - strand, within B158DRAFT_0155 at 153.854 kb on + strand, within B158DRAFT_0155 at 153.918 kb on + strand at 154.013 kb on + strand at 154.013 kb on + strand at 154.013 kb on + strand at 154.018 kb on + strand at 154.018 kb on + strand at 154.021 kb on - strand at 154.021 kb on - strand at 154.031 kb on - strand at 154.039 kb on - strand at 154.136 kb on + strand at 154.136 kb on + strand at 154.136 kb on + strand at 154.144 kb on - strand at 154.258 kb on - strand at 154.269 kb on + strand at 154.269 kb on + strand at 154.306 kb on - strand at 154.369 kb on - strand, within B158DRAFT_0156 at 154.397 kb on + strand, within B158DRAFT_0156 at 154.405 kb on - strand, within B158DRAFT_0156 at 154.476 kb on + strand, within B158DRAFT_0156 at 154.484 kb on - strand, within B158DRAFT_0156 at 154.484 kb on - strand, within B158DRAFT_0156 at 154.544 kb on + strand, within B158DRAFT_0156 at 154.552 kb on - strand, within B158DRAFT_0156 at 154.552 kb on - strand, within B158DRAFT_0156 at 154.556 kb on + strand, within B158DRAFT_0156 at 154.564 kb on - strand, within B158DRAFT_0156 at 154.609 kb on + strand, within B158DRAFT_0156 at 154.617 kb on - strand, within B158DRAFT_0156 at 154.617 kb on - strand, within B158DRAFT_0156 at 154.617 kb on - strand, within B158DRAFT_0156 at 154.617 kb on - strand, within B158DRAFT_0156 at 154.619 kb on + strand, within B158DRAFT_0156 at 154.627 kb on - strand, within B158DRAFT_0156 at 154.632 kb on - strand, within B158DRAFT_0156 at 154.632 kb on - strand, within B158DRAFT_0156 at 154.664 kb on + strand, within B158DRAFT_0156 at 154.664 kb on + strand, within B158DRAFT_0156 at 154.664 kb on + strand, within B158DRAFT_0156 at 154.664 kb on + strand, within B158DRAFT_0156 at 154.667 kb on - strand, within B158DRAFT_0156 at 154.667 kb on - strand, within B158DRAFT_0156 at 154.672 kb on - strand, within B158DRAFT_0156 at 154.672 kb on - strand, within B158DRAFT_0156 at 154.672 kb on - strand, within B158DRAFT_0156 at 154.672 kb on - strand, within B158DRAFT_0156 at 154.672 kb on - strand, within B158DRAFT_0156 at 154.672 kb on - strand, within B158DRAFT_0156 at 154.677 kb on - strand, within B158DRAFT_0156 at 154.727 kb on - strand, within B158DRAFT_0156 at 154.853 kb on + strand, within B158DRAFT_0156 at 154.861 kb on - strand, within B158DRAFT_0156 at 154.861 kb on - strand, within B158DRAFT_0156 at 155.073 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 153,261 + B158DRAFT_0155 0.24 -0.1 153,316 - B158DRAFT_0155 0.29 +0.0 153,350 + B158DRAFT_0155 0.33 +0.2 153,358 - B158DRAFT_0155 0.34 -0.3 153,373 + B158DRAFT_0155 0.35 -0.6 153,373 + B158DRAFT_0155 0.35 +0.3 153,381 - B158DRAFT_0155 0.36 -0.1 153,381 - B158DRAFT_0155 0.36 +0.3 153,381 - B158DRAFT_0155 0.36 +0.0 153,381 - B158DRAFT_0155 0.36 +0.0 153,395 - B158DRAFT_0155 0.37 +0.5 153,397 + B158DRAFT_0155 0.38 -0.3 153,431 - B158DRAFT_0155 0.41 -0.2 153,458 - B158DRAFT_0155 0.44 -0.0 153,581 + B158DRAFT_0155 0.56 +0.0 153,586 + B158DRAFT_0155 0.57 -1.7 153,586 + B158DRAFT_0155 0.57 +0.5 153,613 + B158DRAFT_0155 0.59 +0.0 153,613 + B158DRAFT_0155 0.59 +0.2 153,618 - B158DRAFT_0155 0.60 -0.2 153,621 - B158DRAFT_0155 0.60 +0.1 153,621 - B158DRAFT_0155 0.60 +0.6 153,723 - B158DRAFT_0155 0.71 +1.2 153,729 + B158DRAFT_0155 0.71 +0.5 153,729 + B158DRAFT_0155 0.71 +0.0 153,747 - B158DRAFT_0155 0.73 +0.3 153,769 - B158DRAFT_0155 0.75 -0.2 153,854 + B158DRAFT_0155 0.84 +0.1 153,918 + +0.7 154,013 + +0.1 154,013 + +0.5 154,013 + -0.1 154,018 + +0.1 154,018 + +0.6 154,021 - +0.3 154,021 - -0.4 154,031 - +0.6 154,039 - -0.2 154,136 + -0.6 154,136 + -0.0 154,136 + +0.1 154,144 - -0.1 154,258 - -0.3 154,269 + +0.3 154,269 + +0.2 154,306 - +0.2 154,369 - B158DRAFT_0156 0.18 -0.8 154,397 + B158DRAFT_0156 0.22 +0.4 154,405 - B158DRAFT_0156 0.23 -1.4 154,476 + B158DRAFT_0156 0.33 -0.2 154,484 - B158DRAFT_0156 0.34 -0.3 154,484 - B158DRAFT_0156 0.34 -0.4 154,544 + B158DRAFT_0156 0.43 +0.8 154,552 - B158DRAFT_0156 0.44 -0.2 154,552 - B158DRAFT_0156 0.44 -2.8 154,556 + B158DRAFT_0156 0.44 +0.1 154,564 - B158DRAFT_0156 0.46 +0.2 154,609 + B158DRAFT_0156 0.52 -0.4 154,617 - B158DRAFT_0156 0.53 -0.6 154,617 - B158DRAFT_0156 0.53 -0.6 154,617 - B158DRAFT_0156 0.53 +0.1 154,617 - B158DRAFT_0156 0.53 -0.2 154,619 + B158DRAFT_0156 0.53 -0.2 154,627 - B158DRAFT_0156 0.54 -0.0 154,632 - B158DRAFT_0156 0.55 +0.0 154,632 - B158DRAFT_0156 0.55 -0.1 154,664 + B158DRAFT_0156 0.60 -0.0 154,664 + B158DRAFT_0156 0.60 +0.1 154,664 + B158DRAFT_0156 0.60 -0.3 154,664 + B158DRAFT_0156 0.60 +0.2 154,667 - B158DRAFT_0156 0.60 +0.0 154,667 - B158DRAFT_0156 0.60 -0.4 154,672 - B158DRAFT_0156 0.61 -0.4 154,672 - B158DRAFT_0156 0.61 -0.7 154,672 - B158DRAFT_0156 0.61 +0.3 154,672 - B158DRAFT_0156 0.61 +0.3 154,672 - B158DRAFT_0156 0.61 -0.5 154,672 - B158DRAFT_0156 0.61 +0.3 154,677 - B158DRAFT_0156 0.61 -0.8 154,727 - B158DRAFT_0156 0.68 -0.4 154,853 + B158DRAFT_0156 0.86 -0.2 154,861 - B158DRAFT_0156 0.87 -0.2 154,861 - B158DRAFT_0156 0.87 -0.1 155,073 + +0.4
Or see this region's nucleotide sequence