Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2439

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2438 and B158DRAFT_2439 are separated by 148 nucleotidesB158DRAFT_2439 and B158DRAFT_2440 are separated by 23 nucleotides B158DRAFT_2438: B158DRAFT_2438 - hypothetical protein, at 609,856 to 611,433 _2438 B158DRAFT_2439: B158DRAFT_2439 - Peroxiredoxin, at 611,582 to 612,043 _2439 B158DRAFT_2440: B158DRAFT_2440 - Putative Zn-dependent protease, contains TPR repeats, at 612,067 to 613,566 _2440 Position (kb) 611 612 613Strain fitness (log2 ratio) -1 0 1 2at 610.592 kb on + strand, within B158DRAFT_2438at 610.600 kb on - strand, within B158DRAFT_2438at 610.610 kb on - strand, within B158DRAFT_2438at 610.791 kb on + strand, within B158DRAFT_2438at 610.799 kb on - strand, within B158DRAFT_2438at 610.963 kb on + strand, within B158DRAFT_2438at 610.963 kb on + strand, within B158DRAFT_2438at 611.113 kb on + strand, within B158DRAFT_2438at 611.125 kb on + strand, within B158DRAFT_2438at 611.141 kb on + strand, within B158DRAFT_2438at 611.163 kb on + strand, within B158DRAFT_2438at 611.189 kb on + strand, within B158DRAFT_2438at 611.274 kb on + strand, within B158DRAFT_2438at 611.293 kb on + strandat 611.299 kb on - strandat 611.299 kb on - strandat 611.299 kb on - strandat 611.301 kb on - strandat 611.301 kb on - strandat 611.340 kb on + strandat 611.377 kb on - strandat 611.386 kb on + strandat 611.386 kb on + strandat 611.386 kb on + strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.394 kb on - strandat 611.404 kb on - strandat 611.416 kb on - strandat 611.419 kb on - strandat 611.419 kb on - strandat 611.429 kb on + strandat 611.437 kb on - strandat 611.476 kb on - strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.482 kb on + strandat 611.490 kb on - strandat 611.645 kb on - strand, within B158DRAFT_2439at 611.725 kb on - strand, within B158DRAFT_2439at 611.728 kb on - strand, within B158DRAFT_2439at 611.784 kb on + strand, within B158DRAFT_2439at 611.792 kb on - strand, within B158DRAFT_2439at 611.833 kb on - strand, within B158DRAFT_2439at 612.050 kb on - strandat 612.064 kb on + strandat 612.064 kb on + strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.072 kb on - strandat 612.133 kb on + strandat 612.133 kb on + strandat 612.133 kb on + strandat 612.141 kb on - strandat 612.161 kb on + strandat 612.161 kb on + strandat 612.161 kb on + strandat 612.179 kb on - strandat 612.223 kb on - strand, within B158DRAFT_2440at 612.223 kb on - strand, within B158DRAFT_2440at 612.235 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.241 kb on + strand, within B158DRAFT_2440at 612.248 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.249 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.270 kb on - strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.281 kb on + strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.289 kb on - strand, within B158DRAFT_2440at 612.294 kb on - strand, within B158DRAFT_2440at 612.368 kb on + strand, within B158DRAFT_2440at 612.368 kb on + strand, within B158DRAFT_2440at 612.376 kb on - strand, within B158DRAFT_2440at 612.402 kb on - strand, within B158DRAFT_2440at 612.551 kb on - strand, within B158DRAFT_2440at 612.619 kb on - strand, within B158DRAFT_2440at 612.771 kb on - strand, within B158DRAFT_2440at 612.785 kb on + strand, within B158DRAFT_2440at 612.854 kb on + strand, within B158DRAFT_2440at 612.887 kb on + strand, within B158DRAFT_2440at 612.887 kb on + strand, within B158DRAFT_2440at 612.973 kb on + strand, within B158DRAFT_2440at 612.991 kb on - strand, within B158DRAFT_2440at 612.998 kb on - strand, within B158DRAFT_2440at 613.030 kb on - strand, within B158DRAFT_2440

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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610,592 + B158DRAFT_2438 0.47 -0.1
610,600 - B158DRAFT_2438 0.47 +1.2
610,610 - B158DRAFT_2438 0.48 -0.1
610,791 + B158DRAFT_2438 0.59 +0.7
610,799 - B158DRAFT_2438 0.60 -0.1
610,963 + B158DRAFT_2438 0.70 -0.1
610,963 + B158DRAFT_2438 0.70 +0.3
611,113 + B158DRAFT_2438 0.80 -0.1
611,125 + B158DRAFT_2438 0.80 +0.3
611,141 + B158DRAFT_2438 0.81 +0.1
611,163 + B158DRAFT_2438 0.83 -0.2
611,189 + B158DRAFT_2438 0.84 +0.2
611,274 + B158DRAFT_2438 0.90 +0.7
611,293 + -0.1
611,299 - -0.3
611,299 - -0.2
611,299 - -0.0
611,301 - -0.2
611,301 - +0.4
611,340 + +1.4
611,377 - -0.3
611,386 + -0.1
611,386 + -0.3
611,386 + -0.7
611,394 - -0.5
611,394 - -0.5
611,394 - +0.3
611,394 - -0.1
611,394 - -0.4
611,394 - +0.2
611,404 - +0.0
611,416 - -0.9
611,419 - +0.8
611,419 - +0.4
611,429 + +0.0
611,437 - -1.0
611,476 - -0.5
611,482 + +0.0
611,482 + +0.2
611,482 + +0.1
611,482 + +0.1
611,490 - -0.2
611,645 - B158DRAFT_2439 0.14 -1.6
611,725 - B158DRAFT_2439 0.31 -0.9
611,728 - B158DRAFT_2439 0.32 -1.7
611,784 + B158DRAFT_2439 0.44 -1.4
611,792 - B158DRAFT_2439 0.45 -0.7
611,833 - B158DRAFT_2439 0.54 -0.0
612,050 - +0.9
612,064 + -0.1
612,064 + +0.2
612,072 - -0.2
612,072 - -0.3
612,072 - +0.4
612,072 - -0.7
612,133 + +1.0
612,133 + +0.7
612,133 + +1.2
612,141 - +0.8
612,161 + +1.0
612,161 + +0.2
612,161 + +1.1
612,179 - +1.0
612,223 - B158DRAFT_2440 0.10 +1.2
612,223 - B158DRAFT_2440 0.10 +0.5
612,235 + B158DRAFT_2440 0.11 +0.8
612,241 + B158DRAFT_2440 0.12 +1.1
612,241 + B158DRAFT_2440 0.12 +1.3
612,241 + B158DRAFT_2440 0.12 +0.5
612,241 + B158DRAFT_2440 0.12 +1.0
612,241 + B158DRAFT_2440 0.12 +0.9
612,248 - B158DRAFT_2440 0.12 +0.5
612,249 - B158DRAFT_2440 0.12 +1.0
612,249 - B158DRAFT_2440 0.12 +0.2
612,249 - B158DRAFT_2440 0.12 +0.8
612,249 - B158DRAFT_2440 0.12 +2.0
612,249 - B158DRAFT_2440 0.12 +0.2
612,270 - B158DRAFT_2440 0.14 +0.8
612,270 - B158DRAFT_2440 0.14 +1.4
612,270 - B158DRAFT_2440 0.14 +0.9
612,270 - B158DRAFT_2440 0.14 +1.0
612,281 + B158DRAFT_2440 0.14 +1.1
612,281 + B158DRAFT_2440 0.14 +0.8
612,281 + B158DRAFT_2440 0.14 +0.7
612,281 + B158DRAFT_2440 0.14 +1.0
612,289 - B158DRAFT_2440 0.15 +1.2
612,289 - B158DRAFT_2440 0.15 +1.0
612,289 - B158DRAFT_2440 0.15 +0.6
612,289 - B158DRAFT_2440 0.15 +1.4
612,289 - B158DRAFT_2440 0.15 +0.4
612,289 - B158DRAFT_2440 0.15 +1.1
612,289 - B158DRAFT_2440 0.15 +1.1
612,289 - B158DRAFT_2440 0.15 +0.9
612,294 - B158DRAFT_2440 0.15 +1.3
612,368 + B158DRAFT_2440 0.20 +0.7
612,368 + B158DRAFT_2440 0.20 +1.1
612,376 - B158DRAFT_2440 0.21 +1.2
612,402 - B158DRAFT_2440 0.22 +0.9
612,551 - B158DRAFT_2440 0.32 +0.8
612,619 - B158DRAFT_2440 0.37 +1.3
612,771 - B158DRAFT_2440 0.47 +1.1
612,785 + B158DRAFT_2440 0.48 +0.4
612,854 + B158DRAFT_2440 0.52 +0.7
612,887 + B158DRAFT_2440 0.55 +1.3
612,887 + B158DRAFT_2440 0.55 +0.9
612,973 + B158DRAFT_2440 0.60 +0.9
612,991 - B158DRAFT_2440 0.62 +0.8
612,998 - B158DRAFT_2440 0.62 +0.8
613,030 - B158DRAFT_2440 0.64 +1.1

Or see this region's nucleotide sequence