Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2219

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2218 and B158DRAFT_2219 overlap by 1 nucleotidesB158DRAFT_2219 and B158DRAFT_2220 are separated by 27 nucleotides B158DRAFT_2218: B158DRAFT_2218 - succinylarginine dihydrolase (EC 3.5.3.23), at 366,571 to 367,941 _2218 B158DRAFT_2219: B158DRAFT_2219 - succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), at 367,941 to 369,416 _2219 B158DRAFT_2220: B158DRAFT_2220 - arginine N-succinyltransferase, at 369,444 to 370,466 _2220 Position (kb) 367 368 369 370Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 366.990 kb on + strand, within B158DRAFT_2218at 366.998 kb on - strand, within B158DRAFT_2218at 367.003 kb on - strand, within B158DRAFT_2218at 367.077 kb on + strand, within B158DRAFT_2218at 367.077 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.082 kb on + strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.090 kb on - strand, within B158DRAFT_2218at 367.185 kb on + strand, within B158DRAFT_2218at 367.212 kb on + strand, within B158DRAFT_2218at 367.212 kb on + strand, within B158DRAFT_2218at 367.212 kb on + strand, within B158DRAFT_2218at 367.230 kb on - strand, within B158DRAFT_2218at 367.290 kb on + strand, within B158DRAFT_2218at 367.303 kb on - strand, within B158DRAFT_2218at 367.424 kb on + strand, within B158DRAFT_2218at 367.429 kb on + strand, within B158DRAFT_2218at 367.429 kb on + strand, within B158DRAFT_2218at 367.429 kb on + strand, within B158DRAFT_2218at 367.432 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.437 kb on - strand, within B158DRAFT_2218at 367.441 kb on + strand, within B158DRAFT_2218at 367.446 kb on + strand, within B158DRAFT_2218at 367.594 kb on + strand, within B158DRAFT_2218at 367.602 kb on - strand, within B158DRAFT_2218at 367.602 kb on - strand, within B158DRAFT_2218at 367.705 kb on + strand, within B158DRAFT_2218at 367.739 kb on - strand, within B158DRAFT_2218at 367.760 kb on - strand, within B158DRAFT_2218at 367.760 kb on - strand, within B158DRAFT_2218at 367.766 kb on - strand, within B158DRAFT_2218at 367.775 kb on + strand, within B158DRAFT_2218at 367.876 kb on + strandat 367.884 kb on - strandat 367.939 kb on + strandat 367.939 kb on + strandat 367.955 kb on - strandat 368.071 kb on + strandat 368.262 kb on - strand, within B158DRAFT_2219at 368.294 kb on - strand, within B158DRAFT_2219at 368.310 kb on + strand, within B158DRAFT_2219at 368.318 kb on - strand, within B158DRAFT_2219at 368.320 kb on + strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.323 kb on - strand, within B158DRAFT_2219at 368.341 kb on + strand, within B158DRAFT_2219at 368.349 kb on - strand, within B158DRAFT_2219at 368.377 kb on + strand, within B158DRAFT_2219at 368.377 kb on + strand, within B158DRAFT_2219at 368.385 kb on - strand, within B158DRAFT_2219at 368.390 kb on - strand, within B158DRAFT_2219at 368.399 kb on - strand, within B158DRAFT_2219at 368.414 kb on - strand, within B158DRAFT_2219at 368.414 kb on - strand, within B158DRAFT_2219at 368.435 kb on + strand, within B158DRAFT_2219at 368.435 kb on + strand, within B158DRAFT_2219at 368.443 kb on - strand, within B158DRAFT_2219at 368.443 kb on - strand, within B158DRAFT_2219at 368.566 kb on + strand, within B158DRAFT_2219at 368.566 kb on + strand, within B158DRAFT_2219at 368.571 kb on + strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.579 kb on - strand, within B158DRAFT_2219at 368.586 kb on + strand, within B158DRAFT_2219at 368.648 kb on - strand, within B158DRAFT_2219at 368.676 kb on + strand, within B158DRAFT_2219at 368.761 kb on + strand, within B158DRAFT_2219at 368.761 kb on + strand, within B158DRAFT_2219at 368.767 kb on + strand, within B158DRAFT_2219at 368.769 kb on - strand, within B158DRAFT_2219at 368.807 kb on + strand, within B158DRAFT_2219at 368.824 kb on + strand, within B158DRAFT_2219at 368.824 kb on + strand, within B158DRAFT_2219at 368.832 kb on - strand, within B158DRAFT_2219at 368.844 kb on - strand, within B158DRAFT_2219at 368.886 kb on - strand, within B158DRAFT_2219at 369.042 kb on + strand, within B158DRAFT_2219at 369.050 kb on - strand, within B158DRAFT_2219at 369.251 kb on - strand, within B158DRAFT_2219at 369.335 kb on + strandat 369.478 kb on - strandat 369.512 kb on + strandat 369.512 kb on + strandat 369.512 kb on + strandat 369.512 kb on + strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.520 kb on - strandat 369.530 kb on - strandat 369.530 kb on - strandat 369.536 kb on - strandat 369.538 kb on + strandat 369.538 kb on + strandat 369.616 kb on + strand, within B158DRAFT_2220at 369.664 kb on + strand, within B158DRAFT_2220at 369.693 kb on + strand, within B158DRAFT_2220at 369.701 kb on - strand, within B158DRAFT_2220at 369.745 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.756 kb on + strand, within B158DRAFT_2220at 369.759 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.764 kb on - strand, within B158DRAFT_2220at 369.778 kb on + strand, within B158DRAFT_2220at 369.778 kb on + strand, within B158DRAFT_2220at 369.786 kb on - strand, within B158DRAFT_2220at 369.790 kb on + strand, within B158DRAFT_2220at 369.790 kb on + strand, within B158DRAFT_2220at 369.846 kb on + strand, within B158DRAFT_2220at 369.895 kb on + strand, within B158DRAFT_2220at 369.900 kb on + strand, within B158DRAFT_2220at 369.946 kb on + strand, within B158DRAFT_2220at 369.954 kb on + strand, within B158DRAFT_2220at 369.972 kb on - strand, within B158DRAFT_2220at 369.981 kb on - strand, within B158DRAFT_2220at 369.985 kb on + strand, within B158DRAFT_2220at 370.021 kb on + strand, within B158DRAFT_2220at 370.021 kb on + strand, within B158DRAFT_2220at 370.077 kb on - strand, within B158DRAFT_2220at 370.084 kb on + strand, within B158DRAFT_2220at 370.084 kb on + strand, within B158DRAFT_2220at 370.088 kb on + strand, within B158DRAFT_2220at 370.114 kb on + strand, within B158DRAFT_2220at 370.115 kb on - strand, within B158DRAFT_2220at 370.174 kb on - strand, within B158DRAFT_2220at 370.189 kb on + strand, within B158DRAFT_2220at 370.196 kb on + strand, within B158DRAFT_2220at 370.226 kb on - strand, within B158DRAFT_2220at 370.241 kb on + strand, within B158DRAFT_2220at 370.252 kb on + strand, within B158DRAFT_2220at 370.257 kb on + strand, within B158DRAFT_2220at 370.257 kb on - strand, within B158DRAFT_2220at 370.303 kb on + strand, within B158DRAFT_2220at 370.313 kb on + strand, within B158DRAFT_2220at 370.399 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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366,990 + B158DRAFT_2218 0.31 -2.2
366,998 - B158DRAFT_2218 0.31 -1.3
367,003 - B158DRAFT_2218 0.32 -1.0
367,077 + B158DRAFT_2218 0.37 -0.4
367,077 + B158DRAFT_2218 0.37 -2.6
367,082 + B158DRAFT_2218 0.37 -1.3
367,082 + B158DRAFT_2218 0.37 -1.1
367,082 + B158DRAFT_2218 0.37 -1.0
367,082 + B158DRAFT_2218 0.37 -2.1
367,082 + B158DRAFT_2218 0.37 -1.8
367,090 - B158DRAFT_2218 0.38 -1.4
367,090 - B158DRAFT_2218 0.38 -1.2
367,090 - B158DRAFT_2218 0.38 -4.1
367,090 - B158DRAFT_2218 0.38 -3.2
367,090 - B158DRAFT_2218 0.38 -1.9
367,090 - B158DRAFT_2218 0.38 -3.8
367,090 - B158DRAFT_2218 0.38 -2.8
367,090 - B158DRAFT_2218 0.38 -0.2
367,090 - B158DRAFT_2218 0.38 -1.7
367,185 + B158DRAFT_2218 0.45 +0.8
367,212 + B158DRAFT_2218 0.47 -2.4
367,212 + B158DRAFT_2218 0.47 -2.8
367,212 + B158DRAFT_2218 0.47 -3.8
367,230 - B158DRAFT_2218 0.48 -2.4
367,290 + B158DRAFT_2218 0.52 -2.5
367,303 - B158DRAFT_2218 0.53 -2.0
367,424 + B158DRAFT_2218 0.62 -1.1
367,429 + B158DRAFT_2218 0.63 -1.8
367,429 + B158DRAFT_2218 0.63 -2.5
367,429 + B158DRAFT_2218 0.63 -3.5
367,432 - B158DRAFT_2218 0.63 -2.9
367,437 - B158DRAFT_2218 0.63 -2.6
367,437 - B158DRAFT_2218 0.63 -1.4
367,437 - B158DRAFT_2218 0.63 -0.4
367,437 - B158DRAFT_2218 0.63 -1.0
367,437 - B158DRAFT_2218 0.63 -1.4
367,437 - B158DRAFT_2218 0.63 -2.7
367,437 - B158DRAFT_2218 0.63 -2.8
367,441 + B158DRAFT_2218 0.63 -2.8
367,446 + B158DRAFT_2218 0.64 -2.1
367,594 + B158DRAFT_2218 0.75 -0.6
367,602 - B158DRAFT_2218 0.75 -2.6
367,602 - B158DRAFT_2218 0.75 -3.7
367,705 + B158DRAFT_2218 0.83 -2.2
367,739 - B158DRAFT_2218 0.85 -2.2
367,760 - B158DRAFT_2218 0.87 -2.6
367,760 - B158DRAFT_2218 0.87 -1.9
367,766 - B158DRAFT_2218 0.87 -1.1
367,775 + B158DRAFT_2218 0.88 -0.8
367,876 + -2.3
367,884 - -0.7
367,939 + -1.2
367,939 + -1.8
367,955 - +0.3
368,071 + -0.2
368,262 - B158DRAFT_2219 0.22 -0.2
368,294 - B158DRAFT_2219 0.24 -0.0
368,310 + B158DRAFT_2219 0.25 -2.1
368,318 - B158DRAFT_2219 0.26 -0.7
368,320 + B158DRAFT_2219 0.26 -0.8
368,323 - B158DRAFT_2219 0.26 -0.1
368,323 - B158DRAFT_2219 0.26 -1.0
368,323 - B158DRAFT_2219 0.26 -2.4
368,323 - B158DRAFT_2219 0.26 -1.6
368,341 + B158DRAFT_2219 0.27 -2.5
368,349 - B158DRAFT_2219 0.28 -0.8
368,377 + B158DRAFT_2219 0.30 -2.1
368,377 + B158DRAFT_2219 0.30 -0.3
368,385 - B158DRAFT_2219 0.30 -0.6
368,390 - B158DRAFT_2219 0.30 -0.2
368,399 - B158DRAFT_2219 0.31 -0.7
368,414 - B158DRAFT_2219 0.32 -1.2
368,414 - B158DRAFT_2219 0.32 +0.3
368,435 + B158DRAFT_2219 0.33 -1.0
368,435 + B158DRAFT_2219 0.33 -1.2
368,443 - B158DRAFT_2219 0.34 -2.5
368,443 - B158DRAFT_2219 0.34 -0.3
368,566 + B158DRAFT_2219 0.42 -2.3
368,566 + B158DRAFT_2219 0.42 -1.1
368,571 + B158DRAFT_2219 0.43 -2.4
368,579 - B158DRAFT_2219 0.43 -0.0
368,579 - B158DRAFT_2219 0.43 +1.2
368,579 - B158DRAFT_2219 0.43 +0.6
368,586 + B158DRAFT_2219 0.44 -1.2
368,648 - B158DRAFT_2219 0.48 +0.5
368,676 + B158DRAFT_2219 0.50 -1.8
368,761 + B158DRAFT_2219 0.56 -0.7
368,761 + B158DRAFT_2219 0.56 -1.3
368,767 + B158DRAFT_2219 0.56 -3.2
368,769 - B158DRAFT_2219 0.56 -0.2
368,807 + B158DRAFT_2219 0.59 -2.2
368,824 + B158DRAFT_2219 0.60 -1.6
368,824 + B158DRAFT_2219 0.60 -0.2
368,832 - B158DRAFT_2219 0.60 -0.8
368,844 - B158DRAFT_2219 0.61 -0.7
368,886 - B158DRAFT_2219 0.64 -1.7
369,042 + B158DRAFT_2219 0.75 -2.2
369,050 - B158DRAFT_2219 0.75 -0.5
369,251 - B158DRAFT_2219 0.89 +0.5
369,335 + -2.6
369,478 - +0.1
369,512 + +0.2
369,512 + -1.0
369,512 + -1.4
369,512 + -0.5
369,520 - -1.6
369,520 - -0.6
369,520 - -1.0
369,520 - -0.7
369,520 - -1.2
369,520 - -0.2
369,520 - -0.3
369,520 - +0.2
369,520 - +0.8
369,520 - -2.6
369,520 - -0.7
369,520 - -0.2
369,520 - -0.6
369,520 - -1.0
369,520 - -0.2
369,520 - -0.7
369,520 - -0.4
369,520 - -2.0
369,530 - -0.8
369,530 - -1.1
369,536 - -0.8
369,538 + -1.0
369,538 + -0.2
369,616 + B158DRAFT_2220 0.17 -0.4
369,664 + B158DRAFT_2220 0.22 -0.9
369,693 + B158DRAFT_2220 0.24 -1.3
369,701 - B158DRAFT_2220 0.25 -0.7
369,745 + B158DRAFT_2220 0.29 -0.8
369,756 + B158DRAFT_2220 0.30 -1.2
369,756 + B158DRAFT_2220 0.30 +0.0
369,756 + B158DRAFT_2220 0.30 -0.3
369,756 + B158DRAFT_2220 0.30 -0.5
369,756 + B158DRAFT_2220 0.30 -1.1
369,756 + B158DRAFT_2220 0.30 -1.2
369,759 - B158DRAFT_2220 0.31 +0.2
369,764 - B158DRAFT_2220 0.31 -0.4
369,764 - B158DRAFT_2220 0.31 -0.5
369,764 - B158DRAFT_2220 0.31 -0.7
369,764 - B158DRAFT_2220 0.31 +0.2
369,764 - B158DRAFT_2220 0.31 -1.5
369,764 - B158DRAFT_2220 0.31 -0.6
369,764 - B158DRAFT_2220 0.31 -0.1
369,764 - B158DRAFT_2220 0.31 -0.9
369,764 - B158DRAFT_2220 0.31 -0.8
369,764 - B158DRAFT_2220 0.31 -0.1
369,778 + B158DRAFT_2220 0.33 -0.4
369,778 + B158DRAFT_2220 0.33 -0.9
369,786 - B158DRAFT_2220 0.33 -0.7
369,790 + B158DRAFT_2220 0.34 -1.1
369,790 + B158DRAFT_2220 0.34 -0.6
369,846 + B158DRAFT_2220 0.39 -0.2
369,895 + B158DRAFT_2220 0.44 -1.7
369,900 + B158DRAFT_2220 0.45 -0.7
369,946 + B158DRAFT_2220 0.49 -0.3
369,954 + B158DRAFT_2220 0.50 -1.1
369,972 - B158DRAFT_2220 0.52 -0.8
369,981 - B158DRAFT_2220 0.52 -0.2
369,985 + B158DRAFT_2220 0.53 -0.4
370,021 + B158DRAFT_2220 0.56 -1.5
370,021 + B158DRAFT_2220 0.56 -0.4
370,077 - B158DRAFT_2220 0.62 +0.0
370,084 + B158DRAFT_2220 0.63 -0.0
370,084 + B158DRAFT_2220 0.63 -0.2
370,088 + B158DRAFT_2220 0.63 -0.8
370,114 + B158DRAFT_2220 0.65 +0.2
370,115 - B158DRAFT_2220 0.66 +0.6
370,174 - B158DRAFT_2220 0.71 -1.6
370,189 + B158DRAFT_2220 0.73 +0.2
370,196 + B158DRAFT_2220 0.74 -0.6
370,226 - B158DRAFT_2220 0.76 -0.7
370,241 + B158DRAFT_2220 0.78 -1.0
370,252 + B158DRAFT_2220 0.79 -0.1
370,257 + B158DRAFT_2220 0.79 -1.1
370,257 - B158DRAFT_2220 0.79 -0.2
370,303 + B158DRAFT_2220 0.84 -1.0
370,313 + B158DRAFT_2220 0.85 +0.2
370,399 + -0.2

Or see this region's nucleotide sequence