Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2209 and B158DRAFT_2210 are separated by 205 nucleotides B158DRAFT_2210 and B158DRAFT_2211 are separated by 13 nucleotides B158DRAFT_2211 and B158DRAFT_2212 are separated by 2 nucleotides
B158DRAFT_2209: B158DRAFT_2209 - Bacterial virulence factor lipase N-terminal., at 355,347 to 357,488
_2209
B158DRAFT_2210: B158DRAFT_2210 - Periplasmic serine proteases (ClpP class), at 357,694 to 358,851
_2210
B158DRAFT_2211: B158DRAFT_2211 - thiopurine S-methyltransferase, Se/Te detoxification family, at 358,865 to 359,527
_2211
B158DRAFT_2212: B158DRAFT_2212 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 359,530 to 361,419
_2212
Position (kb) 357
358
359 Strain fitness (log2 ratio) -2
-1
0
1 at 356.719 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.817 kb on + strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.825 kb on - strand, within B158DRAFT_2209 at 356.845 kb on - strand, within B158DRAFT_2209 at 356.869 kb on + strand, within B158DRAFT_2209 at 356.869 kb on + strand, within B158DRAFT_2209 at 356.923 kb on - strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.984 kb on + strand, within B158DRAFT_2209 at 356.987 kb on - strand, within B158DRAFT_2209 at 356.992 kb on - strand, within B158DRAFT_2209 at 356.992 kb on - strand, within B158DRAFT_2209 at 357.140 kb on - strand, within B158DRAFT_2209 at 357.141 kb on + strand, within B158DRAFT_2209 at 357.149 kb on - strand, within B158DRAFT_2209 at 357.179 kb on + strand, within B158DRAFT_2209 at 357.179 kb on + strand, within B158DRAFT_2209 at 357.245 kb on + strand, within B158DRAFT_2209 at 357.280 kb on - strand at 357.288 kb on + strand at 357.369 kb on + strand at 357.371 kb on + strand at 357.377 kb on - strand at 357.379 kb on - strand at 357.443 kb on - strand at 357.460 kb on - strand at 357.490 kb on + strand at 357.490 kb on + strand at 357.498 kb on - strand at 357.584 kb on + strand at 357.584 kb on + strand at 357.591 kb on + strand at 357.591 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.648 kb on + strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.656 kb on - strand at 357.777 kb on + strand at 357.777 kb on + strand at 357.793 kb on + strand at 357.826 kb on + strand, within B158DRAFT_2210 at 357.827 kb on - strand, within B158DRAFT_2210 at 357.827 kb on - strand, within B158DRAFT_2210 at 357.834 kb on - strand, within B158DRAFT_2210 at 357.862 kb on - strand, within B158DRAFT_2210 at 357.895 kb on + strand, within B158DRAFT_2210 at 358.011 kb on + strand, within B158DRAFT_2210 at 358.143 kb on + strand, within B158DRAFT_2210 at 358.149 kb on - strand, within B158DRAFT_2210 at 358.149 kb on - strand, within B158DRAFT_2210 at 358.204 kb on - strand, within B158DRAFT_2210 at 358.211 kb on - strand, within B158DRAFT_2210 at 358.231 kb on - strand, within B158DRAFT_2210 at 358.237 kb on + strand, within B158DRAFT_2210 at 358.239 kb on - strand, within B158DRAFT_2210 at 358.244 kb on + strand, within B158DRAFT_2210 at 358.244 kb on + strand, within B158DRAFT_2210 at 358.245 kb on - strand, within B158DRAFT_2210 at 358.252 kb on - strand, within B158DRAFT_2210 at 358.274 kb on - strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.333 kb on + strand, within B158DRAFT_2210 at 358.354 kb on + strand, within B158DRAFT_2210 at 358.472 kb on - strand, within B158DRAFT_2210 at 358.512 kb on - strand, within B158DRAFT_2210 at 358.512 kb on - strand, within B158DRAFT_2210 at 358.517 kb on - strand, within B158DRAFT_2210 at 358.517 kb on - strand, within B158DRAFT_2210 at 358.517 kb on - strand, within B158DRAFT_2210 at 358.592 kb on + strand, within B158DRAFT_2210 at 358.605 kb on - strand, within B158DRAFT_2210 at 358.606 kb on - strand, within B158DRAFT_2210 at 358.614 kb on + strand, within B158DRAFT_2210 at 358.615 kb on + strand, within B158DRAFT_2210 at 358.622 kb on - strand, within B158DRAFT_2210 at 358.632 kb on + strand, within B158DRAFT_2210 at 358.632 kb on - strand, within B158DRAFT_2210 at 358.649 kb on - strand, within B158DRAFT_2210 at 358.715 kb on - strand, within B158DRAFT_2210 at 358.715 kb on - strand, within B158DRAFT_2210 at 358.723 kb on - strand, within B158DRAFT_2210 at 358.772 kb on + strand at 358.794 kb on + strand at 358.822 kb on - strand at 358.841 kb on - strand at 358.887 kb on + strand at 358.928 kb on + strand at 358.935 kb on - strand, within B158DRAFT_2211 at 359.038 kb on + strand, within B158DRAFT_2211 at 359.046 kb on - strand, within B158DRAFT_2211 at 359.051 kb on - strand, within B158DRAFT_2211 at 359.059 kb on + strand, within B158DRAFT_2211 at 359.065 kb on + strand, within B158DRAFT_2211 at 359.073 kb on - strand, within B158DRAFT_2211 at 359.095 kb on + strand, within B158DRAFT_2211 at 359.109 kb on - strand, within B158DRAFT_2211 at 359.128 kb on + strand, within B158DRAFT_2211 at 359.128 kb on - strand, within B158DRAFT_2211 at 359.128 kb on - strand, within B158DRAFT_2211 at 359.144 kb on - strand, within B158DRAFT_2211 at 359.224 kb on + strand, within B158DRAFT_2211 at 359.224 kb on + strand, within B158DRAFT_2211 at 359.224 kb on + strand, within B158DRAFT_2211 at 359.234 kb on + strand, within B158DRAFT_2211 at 359.242 kb on - strand, within B158DRAFT_2211 at 359.253 kb on + strand, within B158DRAFT_2211 at 359.259 kb on - strand, within B158DRAFT_2211 at 359.281 kb on + strand, within B158DRAFT_2211 at 359.302 kb on - strand, within B158DRAFT_2211 at 359.332 kb on - strand, within B158DRAFT_2211 at 359.333 kb on - strand, within B158DRAFT_2211 at 359.383 kb on + strand, within B158DRAFT_2211 at 359.425 kb on + strand, within B158DRAFT_2211 at 359.432 kb on + strand, within B158DRAFT_2211 at 359.455 kb on + strand, within B158DRAFT_2211 at 359.477 kb on + strand at 359.486 kb on - strand at 359.555 kb on + strand at 359.563 kb on - strand at 359.563 kb on - strand at 359.645 kb on + strand at 359.662 kb on + strand at 359.668 kb on - strand at 359.668 kb on - strand at 359.668 kb on - strand at 359.668 kb on - strand at 359.672 kb on + strand at 359.678 kb on + strand at 359.680 kb on + strand at 359.680 kb on - strand at 359.714 kb on - strand at 359.727 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.729 kb on + strand, within B158DRAFT_2212 at 359.737 kb on - strand, within B158DRAFT_2212 at 359.737 kb on - strand, within B158DRAFT_2212 at 359.785 kb on + strand, within B158DRAFT_2212 at 359.791 kb on + strand, within B158DRAFT_2212
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 356,719 + B158DRAFT_2209 0.64 +0.5 356,817 + B158DRAFT_2209 0.69 +0.3 356,817 + B158DRAFT_2209 0.69 -0.4 356,817 + B158DRAFT_2209 0.69 -0.2 356,817 + B158DRAFT_2209 0.69 -0.5 356,817 + B158DRAFT_2209 0.69 -0.2 356,817 + B158DRAFT_2209 0.69 -0.2 356,817 + B158DRAFT_2209 0.69 -0.9 356,817 + B158DRAFT_2209 0.69 +0.5 356,817 + B158DRAFT_2209 0.69 -0.2 356,817 + B158DRAFT_2209 0.69 -0.4 356,817 + B158DRAFT_2209 0.69 +0.5 356,817 + B158DRAFT_2209 0.69 +0.2 356,825 - B158DRAFT_2209 0.69 -0.2 356,825 - B158DRAFT_2209 0.69 -0.8 356,825 - B158DRAFT_2209 0.69 +0.2 356,825 - B158DRAFT_2209 0.69 +0.3 356,825 - B158DRAFT_2209 0.69 +0.1 356,845 - B158DRAFT_2209 0.70 +0.4 356,869 + B158DRAFT_2209 0.71 +0.3 356,869 + B158DRAFT_2209 0.71 -0.3 356,923 - B158DRAFT_2209 0.74 +0.9 356,984 + B158DRAFT_2209 0.76 -0.2 356,984 + B158DRAFT_2209 0.76 +0.1 356,984 + B158DRAFT_2209 0.76 +0.2 356,984 + B158DRAFT_2209 0.76 -0.2 356,984 + B158DRAFT_2209 0.76 -2.4 356,984 + B158DRAFT_2209 0.76 +0.6 356,984 + B158DRAFT_2209 0.76 -0.3 356,987 - B158DRAFT_2209 0.77 +0.2 356,992 - B158DRAFT_2209 0.77 -0.2 356,992 - B158DRAFT_2209 0.77 -0.1 357,140 - B158DRAFT_2209 0.84 +0.4 357,141 + B158DRAFT_2209 0.84 -0.6 357,149 - B158DRAFT_2209 0.84 +0.6 357,179 + B158DRAFT_2209 0.86 -0.0 357,179 + B158DRAFT_2209 0.86 +0.0 357,245 + B158DRAFT_2209 0.89 +0.2 357,280 - +0.0 357,288 + -0.3 357,369 + -0.1 357,371 + -0.0 357,377 - +0.2 357,379 - -0.1 357,443 - +0.6 357,460 - -0.2 357,490 + -0.0 357,490 + +0.1 357,498 - +0.4 357,584 + +0.2 357,584 + -0.0 357,591 + +0.5 357,591 + -0.9 357,648 + +0.2 357,648 + +0.7 357,648 + -0.0 357,648 + -0.3 357,648 + -0.3 357,648 + -0.2 357,648 + +0.2 357,656 - +0.2 357,656 - +0.0 357,656 - -0.3 357,656 - +0.1 357,656 - +0.0 357,656 - +0.2 357,656 - +0.3 357,656 - -0.1 357,777 + +0.6 357,777 + +0.2 357,793 + +1.0 357,826 + B158DRAFT_2210 0.11 +0.4 357,827 - B158DRAFT_2210 0.11 +0.7 357,827 - B158DRAFT_2210 0.11 +0.2 357,834 - B158DRAFT_2210 0.12 -0.8 357,862 - B158DRAFT_2210 0.15 -0.7 357,895 + B158DRAFT_2210 0.17 -0.6 358,011 + B158DRAFT_2210 0.27 +0.5 358,143 + B158DRAFT_2210 0.39 +0.5 358,149 - B158DRAFT_2210 0.39 -0.1 358,149 - B158DRAFT_2210 0.39 -0.2 358,204 - B158DRAFT_2210 0.44 -0.8 358,211 - B158DRAFT_2210 0.45 -1.2 358,231 - B158DRAFT_2210 0.46 +0.9 358,237 + B158DRAFT_2210 0.47 +0.4 358,239 - B158DRAFT_2210 0.47 +0.1 358,244 + B158DRAFT_2210 0.47 -0.0 358,244 + B158DRAFT_2210 0.47 +0.6 358,245 - B158DRAFT_2210 0.48 +0.3 358,252 - B158DRAFT_2210 0.48 +0.3 358,274 - B158DRAFT_2210 0.50 +0.6 358,333 + B158DRAFT_2210 0.55 +0.4 358,333 + B158DRAFT_2210 0.55 +1.0 358,333 + B158DRAFT_2210 0.55 -0.1 358,333 + B158DRAFT_2210 0.55 -0.3 358,354 + B158DRAFT_2210 0.57 +0.4 358,472 - B158DRAFT_2210 0.67 +0.3 358,512 - B158DRAFT_2210 0.71 +0.3 358,512 - B158DRAFT_2210 0.71 +0.8 358,517 - B158DRAFT_2210 0.71 +0.4 358,517 - B158DRAFT_2210 0.71 -0.1 358,517 - B158DRAFT_2210 0.71 +0.1 358,592 + B158DRAFT_2210 0.78 +0.7 358,605 - B158DRAFT_2210 0.79 +0.7 358,606 - B158DRAFT_2210 0.79 -0.0 358,614 + B158DRAFT_2210 0.79 -0.3 358,615 + B158DRAFT_2210 0.80 +0.2 358,622 - B158DRAFT_2210 0.80 +1.4 358,632 + B158DRAFT_2210 0.81 -0.2 358,632 - B158DRAFT_2210 0.81 -0.2 358,649 - B158DRAFT_2210 0.82 +0.4 358,715 - B158DRAFT_2210 0.88 -0.4 358,715 - B158DRAFT_2210 0.88 +0.2 358,723 - B158DRAFT_2210 0.89 +0.0 358,772 + -1.6 358,794 + +0.5 358,822 - +0.4 358,841 - +0.4 358,887 + -1.4 358,928 + -0.4 358,935 - B158DRAFT_2211 0.11 -0.3 359,038 + B158DRAFT_2211 0.26 +0.4 359,046 - B158DRAFT_2211 0.27 +0.2 359,051 - B158DRAFT_2211 0.28 +0.5 359,059 + B158DRAFT_2211 0.29 -1.2 359,065 + B158DRAFT_2211 0.30 -0.4 359,073 - B158DRAFT_2211 0.31 -1.6 359,095 + B158DRAFT_2211 0.35 -0.0 359,109 - B158DRAFT_2211 0.37 +0.0 359,128 + B158DRAFT_2211 0.40 -0.3 359,128 - B158DRAFT_2211 0.40 -0.2 359,128 - B158DRAFT_2211 0.40 -0.5 359,144 - B158DRAFT_2211 0.42 +0.2 359,224 + B158DRAFT_2211 0.54 +0.0 359,224 + B158DRAFT_2211 0.54 +0.3 359,224 + B158DRAFT_2211 0.54 +0.4 359,234 + B158DRAFT_2211 0.56 +0.0 359,242 - B158DRAFT_2211 0.57 -0.2 359,253 + B158DRAFT_2211 0.59 +0.2 359,259 - B158DRAFT_2211 0.59 +0.2 359,281 + B158DRAFT_2211 0.63 +0.3 359,302 - B158DRAFT_2211 0.66 +0.4 359,332 - B158DRAFT_2211 0.70 -0.3 359,333 - B158DRAFT_2211 0.71 -0.7 359,383 + B158DRAFT_2211 0.78 +0.4 359,425 + B158DRAFT_2211 0.84 -0.4 359,432 + B158DRAFT_2211 0.86 +0.2 359,455 + B158DRAFT_2211 0.89 +0.3 359,477 + +0.2 359,486 - -0.1 359,555 + +0.2 359,563 - +0.4 359,563 - -0.6 359,645 + +0.2 359,662 + -0.0 359,668 - +0.3 359,668 - -0.3 359,668 - +0.2 359,668 - -0.8 359,672 + +0.1 359,678 + -0.8 359,680 + -0.2 359,680 - +0.4 359,714 - +0.2 359,727 + B158DRAFT_2212 0.10 -0.5 359,729 + B158DRAFT_2212 0.11 -0.2 359,729 + B158DRAFT_2212 0.11 +0.1 359,729 + B158DRAFT_2212 0.11 -0.4 359,729 + B158DRAFT_2212 0.11 +0.5 359,737 - B158DRAFT_2212 0.11 +0.2 359,737 - B158DRAFT_2212 0.11 +0.1 359,785 + B158DRAFT_2212 0.13 -0.2 359,791 + B158DRAFT_2212 0.14 -0.9
Or see this region's nucleotide sequence