Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2000 and B158DRAFT_2001 are separated by 24 nucleotides B158DRAFT_2001 and B158DRAFT_2002 are separated by 137 nucleotides B158DRAFT_2002 and B158DRAFT_2003 are separated by 14 nucleotides B158DRAFT_2003 and B158DRAFT_2004 are separated by 25 nucleotides B158DRAFT_2004 and B158DRAFT_2005 are separated by 140 nucleotides
B158DRAFT_2000: B158DRAFT_2000 - Type II secretory pathway, component PulF, at 135,264 to 136,244
_2000
B158DRAFT_2001: B158DRAFT_2001 - hypothetical protein, at 136,269 to 136,850
_2001
B158DRAFT_2002: B158DRAFT_2002 - ribosomal protein S6, at 136,988 to 137,386
_2002
B158DRAFT_2003: B158DRAFT_2003 - ribosomal protein S18, at 137,401 to 137,628
_2003
B158DRAFT_2004: B158DRAFT_2004 - LSU ribosomal protein L9P, at 137,654 to 138,109
_2004
B158DRAFT_2005: B158DRAFT_2005 - hypothetical protein, at 138,250 to 139,080
_2005
Position (kb) 136
137
138 Strain fitness (log2 ratio) -2
-1
0
1
2 at 135.996 kb on - strand, within B158DRAFT_2000 at 135.998 kb on + strand, within B158DRAFT_2000 at 135.998 kb on + strand, within B158DRAFT_2000 at 135.998 kb on + strand, within B158DRAFT_2000 at 135.998 kb on + strand, within B158DRAFT_2000 at 136.005 kb on + strand, within B158DRAFT_2000 at 136.010 kb on + strand, within B158DRAFT_2000 at 136.076 kb on + strand, within B158DRAFT_2000 at 136.076 kb on + strand, within B158DRAFT_2000 at 136.084 kb on - strand, within B158DRAFT_2000 at 136.084 kb on - strand, within B158DRAFT_2000 at 136.084 kb on - strand, within B158DRAFT_2000 at 136.084 kb on - strand, within B158DRAFT_2000 at 136.084 kb on - strand, within B158DRAFT_2000 at 136.091 kb on - strand, within B158DRAFT_2000 at 136.133 kb on + strand, within B158DRAFT_2000 at 136.171 kb on + strand at 136.179 kb on - strand at 136.179 kb on - strand at 136.186 kb on + strand at 136.339 kb on + strand, within B158DRAFT_2001 at 136.349 kb on + strand, within B158DRAFT_2001 at 136.357 kb on - strand, within B158DRAFT_2001 at 136.357 kb on - strand, within B158DRAFT_2001 at 136.357 kb on - strand, within B158DRAFT_2001 at 136.364 kb on - strand, within B158DRAFT_2001 at 136.368 kb on + strand, within B158DRAFT_2001 at 136.376 kb on - strand, within B158DRAFT_2001 at 136.397 kb on + strand, within B158DRAFT_2001 at 136.466 kb on - strand, within B158DRAFT_2001 at 136.571 kb on + strand, within B158DRAFT_2001 at 136.571 kb on + strand, within B158DRAFT_2001 at 136.571 kb on + strand, within B158DRAFT_2001 at 136.571 kb on + strand, within B158DRAFT_2001 at 136.571 kb on + strand, within B158DRAFT_2001 at 136.571 kb on + strand, within B158DRAFT_2001 at 136.571 kb on + strand, within B158DRAFT_2001 at 136.579 kb on - strand, within B158DRAFT_2001 at 136.579 kb on - strand, within B158DRAFT_2001 at 136.579 kb on - strand, within B158DRAFT_2001 at 136.629 kb on + strand, within B158DRAFT_2001 at 136.662 kb on + strand, within B158DRAFT_2001 at 136.705 kb on - strand, within B158DRAFT_2001 at 136.705 kb on - strand, within B158DRAFT_2001 at 136.728 kb on - strand, within B158DRAFT_2001 at 136.838 kb on - strand at 136.840 kb on + strand at 137.729 kb on + strand, within B158DRAFT_2004 at 137.760 kb on - strand, within B158DRAFT_2004 at 137.800 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.846 kb on + strand, within B158DRAFT_2004 at 137.854 kb on - strand, within B158DRAFT_2004 at 137.854 kb on - strand, within B158DRAFT_2004 at 137.864 kb on - strand, within B158DRAFT_2004 at 137.896 kb on - strand, within B158DRAFT_2004 at 137.934 kb on + strand, within B158DRAFT_2004 at 137.971 kb on - strand, within B158DRAFT_2004 at 138.112 kb on - strand at 138.120 kb on - strand at 138.215 kb on + strand at 138.345 kb on - strand, within B158DRAFT_2005 at 138.381 kb on + strand, within B158DRAFT_2005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 135,996 - B158DRAFT_2000 0.75 -0.9 135,998 + B158DRAFT_2000 0.75 -0.2 135,998 + B158DRAFT_2000 0.75 +0.5 135,998 + B158DRAFT_2000 0.75 -0.1 135,998 + B158DRAFT_2000 0.75 -1.1 136,005 + B158DRAFT_2000 0.76 -0.3 136,010 + B158DRAFT_2000 0.76 -1.6 136,076 + B158DRAFT_2000 0.83 +0.0 136,076 + B158DRAFT_2000 0.83 +0.1 136,084 - B158DRAFT_2000 0.84 -0.1 136,084 - B158DRAFT_2000 0.84 +0.1 136,084 - B158DRAFT_2000 0.84 +0.3 136,084 - B158DRAFT_2000 0.84 -0.1 136,084 - B158DRAFT_2000 0.84 -0.1 136,091 - B158DRAFT_2000 0.84 -0.3 136,133 + B158DRAFT_2000 0.89 -0.4 136,171 + +0.8 136,179 - +0.1 136,179 - +0.0 136,186 + -0.1 136,339 + B158DRAFT_2001 0.12 -0.4 136,349 + B158DRAFT_2001 0.14 +0.4 136,357 - B158DRAFT_2001 0.15 +0.0 136,357 - B158DRAFT_2001 0.15 -0.2 136,357 - B158DRAFT_2001 0.15 -0.2 136,364 - B158DRAFT_2001 0.16 +0.1 136,368 + B158DRAFT_2001 0.17 +0.1 136,376 - B158DRAFT_2001 0.18 -0.2 136,397 + B158DRAFT_2001 0.22 +0.5 136,466 - B158DRAFT_2001 0.34 -0.1 136,571 + B158DRAFT_2001 0.52 -0.2 136,571 + B158DRAFT_2001 0.52 -0.3 136,571 + B158DRAFT_2001 0.52 +0.7 136,571 + B158DRAFT_2001 0.52 +1.3 136,571 + B158DRAFT_2001 0.52 -1.0 136,571 + B158DRAFT_2001 0.52 +1.9 136,571 + B158DRAFT_2001 0.52 -0.3 136,579 - B158DRAFT_2001 0.53 -0.7 136,579 - B158DRAFT_2001 0.53 +0.4 136,579 - B158DRAFT_2001 0.53 -0.1 136,629 + B158DRAFT_2001 0.62 -0.6 136,662 + B158DRAFT_2001 0.68 -0.1 136,705 - B158DRAFT_2001 0.75 -0.0 136,705 - B158DRAFT_2001 0.75 -0.1 136,728 - B158DRAFT_2001 0.79 +0.3 136,838 - -0.1 136,840 + -0.7 137,729 + B158DRAFT_2004 0.16 -1.5 137,760 - B158DRAFT_2004 0.23 -2.3 137,800 + B158DRAFT_2004 0.32 -1.6 137,846 + B158DRAFT_2004 0.42 -2.2 137,846 + B158DRAFT_2004 0.42 -1.3 137,846 + B158DRAFT_2004 0.42 -1.0 137,854 - B158DRAFT_2004 0.44 -1.9 137,854 - B158DRAFT_2004 0.44 -1.6 137,864 - B158DRAFT_2004 0.46 -1.8 137,896 - B158DRAFT_2004 0.53 -0.6 137,934 + B158DRAFT_2004 0.61 -2.6 137,971 - B158DRAFT_2004 0.70 -1.2 138,112 - -1.2 138,120 - -1.0 138,215 + -0.2 138,345 - B158DRAFT_2005 0.11 -0.5 138,381 + B158DRAFT_2005 0.16 -2.3
Or see this region's nucleotide sequence