Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1918 and B158DRAFT_1919 are separated by 15 nucleotides B158DRAFT_1919 and B158DRAFT_1920 are separated by 12 nucleotides B158DRAFT_1920 and B158DRAFT_1921 are separated by 251 nucleotides
B158DRAFT_1918: B158DRAFT_1918 - 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7), at 52,460 to 54,298
_1918
B158DRAFT_1919: B158DRAFT_1919 - farnesyl-diphosphate synthase (EC 2.5.1.10), at 54,314 to 55,204
_1919
B158DRAFT_1920: B158DRAFT_1920 - Exodeoxyribonuclease VII small subunit (EC 3.1.11.6), at 55,217 to 55,462
_1920
B158DRAFT_1921: B158DRAFT_1921 - glutaminyl-tRNA synthetase (EC 6.1.1.18), at 55,714 to 57,426
_1921
Position (kb)
55
56 Strain fitness (log2 ratio)
-2
-1
0
1 at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.216 kb on - strand at 55.264 kb on - strand, within B158DRAFT_1920 at 55.323 kb on - strand, within B158DRAFT_1920 at 55.344 kb on - strand, within B158DRAFT_1920 at 55.376 kb on - strand, within B158DRAFT_1920 at 55.511 kb on - strand at 55.511 kb on - strand at 55.618 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 55,216 - +0.5 55,216 - -0.2 55,216 - -0.5 55,216 - -0.3 55,216 - +0.7 55,216 - -0.2 55,216 - +0.3 55,216 - -1.0 55,216 - -0.5 55,216 - +0.5 55,216 - +1.1 55,264 - B158DRAFT_1920 0.19 -1.5 55,323 - B158DRAFT_1920 0.43 -2.7 55,344 - B158DRAFT_1920 0.52 -1.4 55,376 - B158DRAFT_1920 0.65 -1.0 55,511 - -0.1 55,511 - -1.4 55,618 - +0.2
Or see this region's nucleotide sequence