Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1720 and B158DRAFT_1721 are separated by 3 nucleotides B158DRAFT_1721 and B158DRAFT_1722 are separated by 14 nucleotides B158DRAFT_1722 and B158DRAFT_1723 are separated by 102 nucleotides
B158DRAFT_1720: B158DRAFT_1720 - Lactoylglutathione lyase and related lyases, at 1,794,902 to 1,795,441
_1720
B158DRAFT_1721: B158DRAFT_1721 - Phenylalanine 4-hydroxylase (EC 1.14.16.1), at 1,795,445 to 1,796,266
_1721
B158DRAFT_1722: B158DRAFT_1722 - Collagenase and related proteases, at 1,796,281 to 1,797,597
_1722
B158DRAFT_1723: B158DRAFT_1723 - hypothetical protein, at 1,797,700 to 1,799,004
_1723
Position (kb)
1796
1797
1798 Strain fitness (log2 ratio)
-2
-1
0
1 at 1795.298 kb on + strand, within B158DRAFT_1720 at 1795.298 kb on + strand, within B158DRAFT_1720 at 1795.306 kb on - strand, within B158DRAFT_1720 at 1795.319 kb on + strand, within B158DRAFT_1720 at 1795.325 kb on - strand, within B158DRAFT_1720 at 1795.435 kb on + strand at 1795.435 kb on + strand at 1795.436 kb on + strand at 1795.443 kb on - strand at 1795.584 kb on + strand, within B158DRAFT_1721 at 1795.633 kb on + strand, within B158DRAFT_1721 at 1795.633 kb on + strand, within B158DRAFT_1721 at 1795.638 kb on + strand, within B158DRAFT_1721 at 1795.823 kb on + strand, within B158DRAFT_1721 at 1795.823 kb on + strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.831 kb on - strand, within B158DRAFT_1721 at 1795.892 kb on - strand, within B158DRAFT_1721 at 1795.954 kb on + strand, within B158DRAFT_1721 at 1795.962 kb on - strand, within B158DRAFT_1721 at 1796.012 kb on + strand, within B158DRAFT_1721 at 1796.020 kb on - strand, within B158DRAFT_1721 at 1796.020 kb on - strand, within B158DRAFT_1721 at 1796.076 kb on - strand, within B158DRAFT_1721 at 1796.084 kb on - strand, within B158DRAFT_1721 at 1796.296 kb on + strand at 1796.304 kb on - strand at 1796.306 kb on - strand at 1796.309 kb on - strand at 1796.356 kb on - strand at 1796.376 kb on - strand at 1796.384 kb on + strand at 1796.384 kb on + strand at 1796.384 kb on + strand at 1796.384 kb on + strand at 1796.392 kb on - strand at 1796.488 kb on + strand, within B158DRAFT_1722 at 1796.554 kb on + strand, within B158DRAFT_1722 at 1796.554 kb on + strand, within B158DRAFT_1722 at 1796.598 kb on + strand, within B158DRAFT_1722 at 1796.598 kb on + strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.606 kb on - strand, within B158DRAFT_1722 at 1796.634 kb on + strand, within B158DRAFT_1722 at 1796.634 kb on + strand, within B158DRAFT_1722 at 1796.688 kb on - strand, within B158DRAFT_1722 at 1796.688 kb on - strand, within B158DRAFT_1722 at 1796.759 kb on + strand, within B158DRAFT_1722 at 1796.782 kb on + strand, within B158DRAFT_1722 at 1796.790 kb on - strand, within B158DRAFT_1722 at 1796.795 kb on - strand, within B158DRAFT_1722 at 1796.795 kb on - strand, within B158DRAFT_1722 at 1796.798 kb on + strand, within B158DRAFT_1722 at 1796.798 kb on + strand, within B158DRAFT_1722 at 1796.806 kb on - strand, within B158DRAFT_1722 at 1796.806 kb on - strand, within B158DRAFT_1722 at 1796.806 kb on - strand, within B158DRAFT_1722 at 1796.899 kb on + strand, within B158DRAFT_1722 at 1796.902 kb on - strand, within B158DRAFT_1722 at 1796.931 kb on + strand, within B158DRAFT_1722 at 1796.999 kb on + strand, within B158DRAFT_1722 at 1797.009 kb on + strand, within B158DRAFT_1722 at 1797.009 kb on + strand, within B158DRAFT_1722 at 1797.073 kb on + strand, within B158DRAFT_1722 at 1797.121 kb on + strand, within B158DRAFT_1722 at 1797.163 kb on + strand, within B158DRAFT_1722 at 1797.163 kb on + strand, within B158DRAFT_1722 at 1797.163 kb on + strand, within B158DRAFT_1722 at 1797.171 kb on - strand, within B158DRAFT_1722 at 1797.171 kb on - strand, within B158DRAFT_1722 at 1797.171 kb on - strand, within B158DRAFT_1722 at 1797.171 kb on - strand, within B158DRAFT_1722 at 1797.171 kb on - strand, within B158DRAFT_1722 at 1797.171 kb on - strand, within B158DRAFT_1722 at 1797.171 kb on - strand, within B158DRAFT_1722 at 1797.202 kb on + strand, within B158DRAFT_1722 at 1797.230 kb on - strand, within B158DRAFT_1722 at 1797.256 kb on + strand, within B158DRAFT_1722 at 1797.256 kb on + strand, within B158DRAFT_1722 at 1797.383 kb on - strand, within B158DRAFT_1722 at 1797.429 kb on + strand, within B158DRAFT_1722 at 1797.489 kb on + strand at 1797.497 kb on - strand at 1797.497 kb on - strand at 1797.509 kb on + strand at 1797.534 kb on - strand at 1797.558 kb on - strand at 1797.629 kb on + strand at 1797.632 kb on - strand at 1797.632 kb on - strand at 1797.668 kb on + strand at 1797.786 kb on + strand at 1797.786 kb on + strand at 1797.786 kb on + strand at 1797.856 kb on - strand, within B158DRAFT_1723 at 1797.866 kb on + strand, within B158DRAFT_1723 at 1797.866 kb on - strand, within B158DRAFT_1723 at 1797.909 kb on + strand, within B158DRAFT_1723 at 1797.915 kb on + strand, within B158DRAFT_1723 at 1797.923 kb on - strand, within B158DRAFT_1723 at 1797.946 kb on - strand, within B158DRAFT_1723 at 1797.983 kb on + strand, within B158DRAFT_1723 at 1797.983 kb on + strand, within B158DRAFT_1723 at 1797.983 kb on + strand, within B158DRAFT_1723 at 1797.983 kb on + strand, within B158DRAFT_1723 at 1797.983 kb on + strand, within B158DRAFT_1723 at 1797.991 kb on - strand, within B158DRAFT_1723 at 1797.991 kb on - strand, within B158DRAFT_1723 at 1797.991 kb on - strand, within B158DRAFT_1723 at 1797.991 kb on - strand, within B158DRAFT_1723 at 1797.991 kb on - strand, within B158DRAFT_1723 at 1797.991 kb on - strand, within B158DRAFT_1723 at 1797.991 kb on - strand, within B158DRAFT_1723 at 1797.999 kb on - strand, within B158DRAFT_1723 at 1798.001 kb on + strand, within B158DRAFT_1723 at 1798.001 kb on + strand, within B158DRAFT_1723 at 1798.001 kb on + strand, within B158DRAFT_1723 at 1798.009 kb on - strand, within B158DRAFT_1723 at 1798.009 kb on - strand, within B158DRAFT_1723 at 1798.015 kb on + strand, within B158DRAFT_1723 at 1798.067 kb on + strand, within B158DRAFT_1723 at 1798.067 kb on - strand, within B158DRAFT_1723 at 1798.067 kb on - strand, within B158DRAFT_1723 at 1798.084 kb on + strand, within B158DRAFT_1723 at 1798.112 kb on - strand, within B158DRAFT_1723 at 1798.152 kb on + strand, within B158DRAFT_1723 at 1798.162 kb on + strand, within B158DRAFT_1723 at 1798.162 kb on + strand, within B158DRAFT_1723 at 1798.162 kb on + strand, within B158DRAFT_1723 at 1798.162 kb on + strand, within B158DRAFT_1723 at 1798.162 kb on + strand, within B158DRAFT_1723 at 1798.167 kb on + strand, within B158DRAFT_1723 at 1798.170 kb on - strand, within B158DRAFT_1723 at 1798.170 kb on - strand, within B158DRAFT_1723 at 1798.175 kb on - strand, within B158DRAFT_1723 at 1798.177 kb on - strand, within B158DRAFT_1723 at 1798.195 kb on - strand, within B158DRAFT_1723 at 1798.220 kb on + strand, within B158DRAFT_1723 at 1798.344 kb on + strand, within B158DRAFT_1723 at 1798.352 kb on - strand, within B158DRAFT_1723 at 1798.502 kb on + strand, within B158DRAFT_1723 at 1798.502 kb on + strand, within B158DRAFT_1723 at 1798.510 kb on - strand, within B158DRAFT_1723 at 1798.510 kb on - strand, within B158DRAFT_1723 at 1798.510 kb on - strand, within B158DRAFT_1723
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 1,795,298 + B158DRAFT_1720 0.73 +0.1 1,795,298 + B158DRAFT_1720 0.73 -0.6 1,795,306 - B158DRAFT_1720 0.75 -0.2 1,795,319 + B158DRAFT_1720 0.77 -0.5 1,795,325 - B158DRAFT_1720 0.78 +0.2 1,795,435 + -0.6 1,795,435 + -0.1 1,795,436 + -1.0 1,795,443 - +0.1 1,795,584 + B158DRAFT_1721 0.17 -0.0 1,795,633 + B158DRAFT_1721 0.23 -0.0 1,795,633 + B158DRAFT_1721 0.23 +0.1 1,795,638 + B158DRAFT_1721 0.23 -0.3 1,795,823 + B158DRAFT_1721 0.46 -0.6 1,795,823 + B158DRAFT_1721 0.46 -0.1 1,795,831 - B158DRAFT_1721 0.47 -0.6 1,795,831 - B158DRAFT_1721 0.47 +0.2 1,795,831 - B158DRAFT_1721 0.47 -1.1 1,795,831 - B158DRAFT_1721 0.47 +0.3 1,795,831 - B158DRAFT_1721 0.47 -0.6 1,795,892 - B158DRAFT_1721 0.54 +0.1 1,795,954 + B158DRAFT_1721 0.62 +0.1 1,795,962 - B158DRAFT_1721 0.63 -0.2 1,796,012 + B158DRAFT_1721 0.69 +0.1 1,796,020 - B158DRAFT_1721 0.70 -0.7 1,796,020 - B158DRAFT_1721 0.70 +0.2 1,796,076 - B158DRAFT_1721 0.77 -0.1 1,796,084 - B158DRAFT_1721 0.78 -0.4 1,796,296 + -0.7 1,796,304 - -0.3 1,796,306 - -0.1 1,796,309 - -1.1 1,796,356 - -0.6 1,796,376 - -0.3 1,796,384 + -0.3 1,796,384 + +0.2 1,796,384 + -0.5 1,796,384 + +0.2 1,796,392 - -0.1 1,796,488 + B158DRAFT_1722 0.16 +0.3 1,796,554 + B158DRAFT_1722 0.21 +0.9 1,796,554 + B158DRAFT_1722 0.21 -0.1 1,796,598 + B158DRAFT_1722 0.24 +0.4 1,796,598 + B158DRAFT_1722 0.24 -0.1 1,796,606 - B158DRAFT_1722 0.25 -0.1 1,796,606 - B158DRAFT_1722 0.25 -1.5 1,796,606 - B158DRAFT_1722 0.25 +0.8 1,796,606 - B158DRAFT_1722 0.25 -0.4 1,796,606 - B158DRAFT_1722 0.25 -0.0 1,796,606 - B158DRAFT_1722 0.25 +0.6 1,796,606 - B158DRAFT_1722 0.25 +0.3 1,796,606 - B158DRAFT_1722 0.25 +0.1 1,796,634 + B158DRAFT_1722 0.27 +0.0 1,796,634 + B158DRAFT_1722 0.27 +0.2 1,796,688 - B158DRAFT_1722 0.31 -0.3 1,796,688 - B158DRAFT_1722 0.31 -0.7 1,796,759 + B158DRAFT_1722 0.36 -0.7 1,796,782 + B158DRAFT_1722 0.38 -0.2 1,796,790 - B158DRAFT_1722 0.39 -0.5 1,796,795 - B158DRAFT_1722 0.39 +0.0 1,796,795 - B158DRAFT_1722 0.39 -0.1 1,796,798 + B158DRAFT_1722 0.39 -0.3 1,796,798 + B158DRAFT_1722 0.39 +0.2 1,796,806 - B158DRAFT_1722 0.40 +0.5 1,796,806 - B158DRAFT_1722 0.40 +0.2 1,796,806 - B158DRAFT_1722 0.40 -0.7 1,796,899 + B158DRAFT_1722 0.47 -0.4 1,796,902 - B158DRAFT_1722 0.47 +0.0 1,796,931 + B158DRAFT_1722 0.49 -0.3 1,796,999 + B158DRAFT_1722 0.55 +0.5 1,797,009 + B158DRAFT_1722 0.55 +0.3 1,797,009 + B158DRAFT_1722 0.55 +0.0 1,797,073 + B158DRAFT_1722 0.60 -2.2 1,797,121 + B158DRAFT_1722 0.64 +0.4 1,797,163 + B158DRAFT_1722 0.67 -0.0 1,797,163 + B158DRAFT_1722 0.67 +0.9 1,797,163 + B158DRAFT_1722 0.67 +0.8 1,797,171 - B158DRAFT_1722 0.68 +0.0 1,797,171 - B158DRAFT_1722 0.68 -0.0 1,797,171 - B158DRAFT_1722 0.68 -0.5 1,797,171 - B158DRAFT_1722 0.68 +0.1 1,797,171 - B158DRAFT_1722 0.68 +0.1 1,797,171 - B158DRAFT_1722 0.68 -0.4 1,797,171 - B158DRAFT_1722 0.68 +0.4 1,797,202 + B158DRAFT_1722 0.70 +0.3 1,797,230 - B158DRAFT_1722 0.72 -0.3 1,797,256 + B158DRAFT_1722 0.74 -0.3 1,797,256 + B158DRAFT_1722 0.74 -0.4 1,797,383 - B158DRAFT_1722 0.84 +0.4 1,797,429 + B158DRAFT_1722 0.87 +0.1 1,797,489 + -0.6 1,797,497 - +0.4 1,797,497 - -0.3 1,797,509 + -0.8 1,797,534 - -0.6 1,797,558 - +0.1 1,797,629 + +0.2 1,797,632 - -1.0 1,797,632 - -0.2 1,797,668 + +0.0 1,797,786 + +0.5 1,797,786 + +0.2 1,797,786 + -0.4 1,797,856 - B158DRAFT_1723 0.12 +0.4 1,797,866 + B158DRAFT_1723 0.13 -1.1 1,797,866 - B158DRAFT_1723 0.13 -0.6 1,797,909 + B158DRAFT_1723 0.16 +0.0 1,797,915 + B158DRAFT_1723 0.16 +0.3 1,797,923 - B158DRAFT_1723 0.17 -0.3 1,797,946 - B158DRAFT_1723 0.19 -0.3 1,797,983 + B158DRAFT_1723 0.22 -0.5 1,797,983 + B158DRAFT_1723 0.22 -0.5 1,797,983 + B158DRAFT_1723 0.22 -0.4 1,797,983 + B158DRAFT_1723 0.22 +0.2 1,797,983 + B158DRAFT_1723 0.22 +0.1 1,797,991 - B158DRAFT_1723 0.22 +0.8 1,797,991 - B158DRAFT_1723 0.22 -0.1 1,797,991 - B158DRAFT_1723 0.22 +0.5 1,797,991 - B158DRAFT_1723 0.22 +0.1 1,797,991 - B158DRAFT_1723 0.22 -0.6 1,797,991 - B158DRAFT_1723 0.22 -0.4 1,797,991 - B158DRAFT_1723 0.22 -0.8 1,797,999 - B158DRAFT_1723 0.23 -0.0 1,798,001 + B158DRAFT_1723 0.23 +0.4 1,798,001 + B158DRAFT_1723 0.23 +0.3 1,798,001 + B158DRAFT_1723 0.23 -0.2 1,798,009 - B158DRAFT_1723 0.24 -0.0 1,798,009 - B158DRAFT_1723 0.24 +0.1 1,798,015 + B158DRAFT_1723 0.24 +0.3 1,798,067 + B158DRAFT_1723 0.28 +0.2 1,798,067 - B158DRAFT_1723 0.28 -0.1 1,798,067 - B158DRAFT_1723 0.28 -0.6 1,798,084 + B158DRAFT_1723 0.29 +0.4 1,798,112 - B158DRAFT_1723 0.32 +0.4 1,798,152 + B158DRAFT_1723 0.35 -0.5 1,798,162 + B158DRAFT_1723 0.35 -0.5 1,798,162 + B158DRAFT_1723 0.35 -0.7 1,798,162 + B158DRAFT_1723 0.35 +0.4 1,798,162 + B158DRAFT_1723 0.35 -0.6 1,798,162 + B158DRAFT_1723 0.35 +0.3 1,798,167 + B158DRAFT_1723 0.36 +0.2 1,798,170 - B158DRAFT_1723 0.36 -0.1 1,798,170 - B158DRAFT_1723 0.36 -0.5 1,798,175 - B158DRAFT_1723 0.36 -0.6 1,798,177 - B158DRAFT_1723 0.37 +0.6 1,798,195 - B158DRAFT_1723 0.38 +0.0 1,798,220 + B158DRAFT_1723 0.40 +0.3 1,798,344 + B158DRAFT_1723 0.49 -0.9 1,798,352 - B158DRAFT_1723 0.50 -0.2 1,798,502 + B158DRAFT_1723 0.61 +0.3 1,798,502 + B158DRAFT_1723 0.61 +0.2 1,798,510 - B158DRAFT_1723 0.62 -1.4 1,798,510 - B158DRAFT_1723 0.62 -0.2 1,798,510 - B158DRAFT_1723 0.62 +0.3
Or see this region's nucleotide sequence