Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1396

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1394 and B158DRAFT_1395 are separated by 20 nucleotidesB158DRAFT_1395 and B158DRAFT_1396 are separated by 208 nucleotidesB158DRAFT_1396 and B158DRAFT_1397 are separated by 168 nucleotides B158DRAFT_1394: B158DRAFT_1394 - Peptidase family M49., at 1,437,020 to 1,438,753 _1394 B158DRAFT_1395: B158DRAFT_1395 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 1,438,774 to 1,439,505 _1395 B158DRAFT_1396: B158DRAFT_1396 - hypothetical protein, at 1,439,714 to 1,440,946 _1396 B158DRAFT_1397: B158DRAFT_1397 - Domain of unknown function (DUF1083)., at 1,441,115 to 1,443,352 _1397 Position (kb) 1439 1440 1441Strain fitness (log2 ratio) -2 -1 0 1 2at 1438.743 kb on + strandat 1438.810 kb on - strandat 1438.812 kb on + strandat 1438.812 kb on + strandat 1438.820 kb on - strandat 1438.918 kb on + strand, within B158DRAFT_1395at 1439.036 kb on - strand, within B158DRAFT_1395at 1439.036 kb on - strand, within B158DRAFT_1395at 1439.056 kb on - strand, within B158DRAFT_1395at 1439.068 kb on - strand, within B158DRAFT_1395at 1439.127 kb on + strand, within B158DRAFT_1395at 1439.142 kb on - strand, within B158DRAFT_1395at 1439.144 kb on + strand, within B158DRAFT_1395at 1439.183 kb on + strand, within B158DRAFT_1395at 1439.184 kb on + strand, within B158DRAFT_1395at 1439.191 kb on - strand, within B158DRAFT_1395at 1439.191 kb on - strand, within B158DRAFT_1395at 1439.191 kb on - strand, within B158DRAFT_1395at 1439.263 kb on + strand, within B158DRAFT_1395at 1439.353 kb on + strand, within B158DRAFT_1395at 1439.410 kb on + strand, within B158DRAFT_1395at 1439.412 kb on + strand, within B158DRAFT_1395at 1439.420 kb on - strand, within B158DRAFT_1395at 1439.420 kb on - strand, within B158DRAFT_1395at 1439.438 kb on + strandat 1439.534 kb on + strandat 1439.542 kb on - strandat 1439.565 kb on + strandat 1439.611 kb on - strandat 1439.661 kb on - strandat 1439.738 kb on - strandat 1439.745 kb on + strandat 1439.753 kb on - strandat 1439.753 kb on - strandat 1439.919 kb on + strand, within B158DRAFT_1396at 1439.919 kb on + strand, within B158DRAFT_1396at 1439.919 kb on + strand, within B158DRAFT_1396at 1439.919 kb on + strand, within B158DRAFT_1396at 1439.919 kb on + strand, within B158DRAFT_1396at 1439.919 kb on + strand, within B158DRAFT_1396at 1439.919 kb on + strand, within B158DRAFT_1396at 1439.927 kb on - strand, within B158DRAFT_1396at 1439.927 kb on - strand, within B158DRAFT_1396at 1439.927 kb on - strand, within B158DRAFT_1396at 1439.927 kb on - strand, within B158DRAFT_1396at 1439.927 kb on - strand, within B158DRAFT_1396at 1439.927 kb on - strand, within B158DRAFT_1396at 1439.929 kb on + strand, within B158DRAFT_1396at 1439.929 kb on + strand, within B158DRAFT_1396at 1439.929 kb on + strand, within B158DRAFT_1396at 1439.929 kb on + strand, within B158DRAFT_1396at 1439.929 kb on + strand, within B158DRAFT_1396at 1439.929 kb on + strand, within B158DRAFT_1396at 1439.937 kb on - strand, within B158DRAFT_1396at 1439.941 kb on + strand, within B158DRAFT_1396at 1439.942 kb on - strand, within B158DRAFT_1396at 1439.968 kb on + strand, within B158DRAFT_1396at 1439.976 kb on - strand, within B158DRAFT_1396at 1439.976 kb on - strand, within B158DRAFT_1396at 1440.030 kb on + strand, within B158DRAFT_1396at 1440.040 kb on + strand, within B158DRAFT_1396at 1440.064 kb on + strand, within B158DRAFT_1396at 1440.118 kb on + strand, within B158DRAFT_1396at 1440.126 kb on - strand, within B158DRAFT_1396at 1440.227 kb on + strand, within B158DRAFT_1396at 1440.227 kb on + strand, within B158DRAFT_1396at 1440.237 kb on + strand, within B158DRAFT_1396at 1440.237 kb on + strand, within B158DRAFT_1396at 1440.237 kb on - strand, within B158DRAFT_1396at 1440.245 kb on - strand, within B158DRAFT_1396at 1440.245 kb on - strand, within B158DRAFT_1396at 1440.245 kb on - strand, within B158DRAFT_1396at 1440.250 kb on - strand, within B158DRAFT_1396at 1440.270 kb on + strand, within B158DRAFT_1396at 1440.278 kb on - strand, within B158DRAFT_1396at 1440.278 kb on - strand, within B158DRAFT_1396at 1440.288 kb on - strand, within B158DRAFT_1396at 1440.291 kb on + strand, within B158DRAFT_1396at 1440.291 kb on + strand, within B158DRAFT_1396at 1440.299 kb on - strand, within B158DRAFT_1396at 1440.306 kb on - strand, within B158DRAFT_1396at 1440.306 kb on - strand, within B158DRAFT_1396at 1440.306 kb on - strand, within B158DRAFT_1396at 1440.374 kb on - strand, within B158DRAFT_1396at 1440.396 kb on + strand, within B158DRAFT_1396at 1440.403 kb on - strand, within B158DRAFT_1396at 1440.404 kb on - strand, within B158DRAFT_1396at 1440.404 kb on - strand, within B158DRAFT_1396at 1440.404 kb on - strand, within B158DRAFT_1396at 1440.404 kb on - strand, within B158DRAFT_1396at 1440.433 kb on - strand, within B158DRAFT_1396at 1440.495 kb on - strand, within B158DRAFT_1396at 1440.559 kb on + strand, within B158DRAFT_1396at 1440.562 kb on - strand, within B158DRAFT_1396at 1440.657 kb on + strand, within B158DRAFT_1396at 1440.657 kb on + strand, within B158DRAFT_1396at 1440.694 kb on - strand, within B158DRAFT_1396at 1440.721 kb on + strand, within B158DRAFT_1396at 1440.745 kb on + strand, within B158DRAFT_1396at 1440.758 kb on + strand, within B158DRAFT_1396at 1440.766 kb on - strand, within B158DRAFT_1396at 1440.789 kb on - strand, within B158DRAFT_1396at 1440.834 kb on + strandat 1440.873 kb on + strandat 1440.911 kb on + strandat 1440.931 kb on + strandat 1440.939 kb on - strandat 1440.939 kb on - strandat 1440.939 kb on - strandat 1441.055 kb on - strandat 1441.145 kb on - strandat 1441.204 kb on + strandat 1441.221 kb on + strandat 1441.221 kb on + strandat 1441.229 kb on - strandat 1441.268 kb on + strandat 1441.340 kb on - strand, within B158DRAFT_1397at 1441.393 kb on - strand, within B158DRAFT_1397at 1441.393 kb on - strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.395 kb on + strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.403 kb on - strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.405 kb on + strand, within B158DRAFT_1397at 1441.413 kb on - strand, within B158DRAFT_1397at 1441.413 kb on - strand, within B158DRAFT_1397at 1441.413 kb on - strand, within B158DRAFT_1397at 1441.413 kb on - strand, within B158DRAFT_1397at 1441.413 kb on - strand, within B158DRAFT_1397at 1441.530 kb on + strand, within B158DRAFT_1397at 1441.538 kb on - strand, within B158DRAFT_1397at 1441.538 kb on - strand, within B158DRAFT_1397at 1441.550 kb on - strand, within B158DRAFT_1397at 1441.550 kb on - strand, within B158DRAFT_1397at 1441.577 kb on + strand, within B158DRAFT_1397at 1441.582 kb on + strand, within B158DRAFT_1397at 1441.582 kb on + strand, within B158DRAFT_1397at 1441.587 kb on + strand, within B158DRAFT_1397at 1441.587 kb on + strand, within B158DRAFT_1397at 1441.595 kb on - strand, within B158DRAFT_1397at 1441.595 kb on - strand, within B158DRAFT_1397at 1441.595 kb on - strand, within B158DRAFT_1397at 1441.595 kb on - strand, within B158DRAFT_1397at 1441.628 kb on + strand, within B158DRAFT_1397at 1441.643 kb on + strand, within B158DRAFT_1397at 1441.643 kb on + strand, within B158DRAFT_1397at 1441.643 kb on + strand, within B158DRAFT_1397at 1441.684 kb on + strand, within B158DRAFT_1397at 1441.693 kb on + strand, within B158DRAFT_1397at 1441.693 kb on + strand, within B158DRAFT_1397at 1441.693 kb on + strand, within B158DRAFT_1397at 1441.693 kb on + strand, within B158DRAFT_1397at 1441.731 kb on - strand, within B158DRAFT_1397at 1441.733 kb on + strand, within B158DRAFT_1397at 1441.741 kb on - strand, within B158DRAFT_1397at 1441.785 kb on + strand, within B158DRAFT_1397at 1441.785 kb on + strand, within B158DRAFT_1397at 1441.785 kb on + strand, within B158DRAFT_1397at 1441.785 kb on + strand, within B158DRAFT_1397at 1441.793 kb on - strand, within B158DRAFT_1397at 1441.794 kb on + strand, within B158DRAFT_1397at 1441.814 kb on - strand, within B158DRAFT_1397at 1441.828 kb on + strand, within B158DRAFT_1397at 1441.830 kb on + strand, within B158DRAFT_1397at 1441.838 kb on - strand, within B158DRAFT_1397at 1441.883 kb on - strand, within B158DRAFT_1397at 1441.885 kb on + strand, within B158DRAFT_1397at 1441.885 kb on + strand, within B158DRAFT_1397at 1441.911 kb on + strand, within B158DRAFT_1397at 1441.911 kb on + strand, within B158DRAFT_1397at 1441.911 kb on + strand, within B158DRAFT_1397at 1441.911 kb on + strand, within B158DRAFT_1397at 1441.911 kb on + strand, within B158DRAFT_1397at 1441.911 kb on + strand, within B158DRAFT_1397

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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1,438,743 + -0.8
1,438,810 - +1.5
1,438,812 + +1.9
1,438,812 + +1.8
1,438,820 - +1.5
1,438,918 + B158DRAFT_1395 0.20 +1.0
1,439,036 - B158DRAFT_1395 0.36 +1.3
1,439,036 - B158DRAFT_1395 0.36 +1.5
1,439,056 - B158DRAFT_1395 0.39 +1.5
1,439,068 - B158DRAFT_1395 0.40 +1.9
1,439,127 + B158DRAFT_1395 0.48 +1.7
1,439,142 - B158DRAFT_1395 0.50 +1.2
1,439,144 + B158DRAFT_1395 0.51 +2.2
1,439,183 + B158DRAFT_1395 0.56 +1.9
1,439,184 + B158DRAFT_1395 0.56 +1.6
1,439,191 - B158DRAFT_1395 0.57 +1.6
1,439,191 - B158DRAFT_1395 0.57 +1.7
1,439,191 - B158DRAFT_1395 0.57 +1.6
1,439,263 + B158DRAFT_1395 0.67 +0.9
1,439,353 + B158DRAFT_1395 0.79 +1.4
1,439,410 + B158DRAFT_1395 0.87 +1.8
1,439,412 + B158DRAFT_1395 0.87 +1.2
1,439,420 - B158DRAFT_1395 0.88 +1.5
1,439,420 - B158DRAFT_1395 0.88 +2.0
1,439,438 + +0.7
1,439,534 + +0.5
1,439,542 - -0.2
1,439,565 + +0.2
1,439,611 - +0.0
1,439,661 - -1.2
1,439,738 - -0.1
1,439,745 + +0.3
1,439,753 - -0.5
1,439,753 - -0.3
1,439,919 + B158DRAFT_1396 0.17 +0.5
1,439,919 + B158DRAFT_1396 0.17 -0.5
1,439,919 + B158DRAFT_1396 0.17 -0.6
1,439,919 + B158DRAFT_1396 0.17 +0.0
1,439,919 + B158DRAFT_1396 0.17 +0.1
1,439,919 + B158DRAFT_1396 0.17 -0.3
1,439,919 + B158DRAFT_1396 0.17 +0.1
1,439,927 - B158DRAFT_1396 0.17 -0.1
1,439,927 - B158DRAFT_1396 0.17 -2.0
1,439,927 - B158DRAFT_1396 0.17 -0.7
1,439,927 - B158DRAFT_1396 0.17 -0.2
1,439,927 - B158DRAFT_1396 0.17 +0.5
1,439,927 - B158DRAFT_1396 0.17 +0.0
1,439,929 + B158DRAFT_1396 0.17 -0.2
1,439,929 + B158DRAFT_1396 0.17 +0.2
1,439,929 + B158DRAFT_1396 0.17 -0.6
1,439,929 + B158DRAFT_1396 0.17 -0.3
1,439,929 + B158DRAFT_1396 0.17 -0.1
1,439,929 + B158DRAFT_1396 0.17 -0.4
1,439,937 - B158DRAFT_1396 0.18 -0.4
1,439,941 + B158DRAFT_1396 0.18 -0.7
1,439,942 - B158DRAFT_1396 0.18 -0.2
1,439,968 + B158DRAFT_1396 0.21 -0.1
1,439,976 - B158DRAFT_1396 0.21 -0.2
1,439,976 - B158DRAFT_1396 0.21 -0.2
1,440,030 + B158DRAFT_1396 0.26 -0.8
1,440,040 + B158DRAFT_1396 0.26 -0.3
1,440,064 + B158DRAFT_1396 0.28 +0.5
1,440,118 + B158DRAFT_1396 0.33 -0.4
1,440,126 - B158DRAFT_1396 0.33 -0.8
1,440,227 + B158DRAFT_1396 0.42 +1.1
1,440,227 + B158DRAFT_1396 0.42 +0.1
1,440,237 + B158DRAFT_1396 0.42 +0.8
1,440,237 + B158DRAFT_1396 0.42 +0.5
1,440,237 - B158DRAFT_1396 0.42 -0.7
1,440,245 - B158DRAFT_1396 0.43 -0.4
1,440,245 - B158DRAFT_1396 0.43 +0.7
1,440,245 - B158DRAFT_1396 0.43 -0.1
1,440,250 - B158DRAFT_1396 0.43 -0.7
1,440,270 + B158DRAFT_1396 0.45 -1.4
1,440,278 - B158DRAFT_1396 0.46 +0.1
1,440,278 - B158DRAFT_1396 0.46 +0.3
1,440,288 - B158DRAFT_1396 0.47 -0.3
1,440,291 + B158DRAFT_1396 0.47 -0.6
1,440,291 + B158DRAFT_1396 0.47 +0.1
1,440,299 - B158DRAFT_1396 0.47 +0.6
1,440,306 - B158DRAFT_1396 0.48 -0.3
1,440,306 - B158DRAFT_1396 0.48 -2.1
1,440,306 - B158DRAFT_1396 0.48 +0.2
1,440,374 - B158DRAFT_1396 0.54 -0.7
1,440,396 + B158DRAFT_1396 0.55 -0.9
1,440,403 - B158DRAFT_1396 0.56 +0.5
1,440,404 - B158DRAFT_1396 0.56 -0.0
1,440,404 - B158DRAFT_1396 0.56 -0.4
1,440,404 - B158DRAFT_1396 0.56 +0.3
1,440,404 - B158DRAFT_1396 0.56 -1.9
1,440,433 - B158DRAFT_1396 0.58 +0.1
1,440,495 - B158DRAFT_1396 0.63 +0.2
1,440,559 + B158DRAFT_1396 0.69 -0.6
1,440,562 - B158DRAFT_1396 0.69 +0.4
1,440,657 + B158DRAFT_1396 0.76 -1.3
1,440,657 + B158DRAFT_1396 0.76 +0.2
1,440,694 - B158DRAFT_1396 0.79 +0.4
1,440,721 + B158DRAFT_1396 0.82 +0.3
1,440,745 + B158DRAFT_1396 0.84 +0.5
1,440,758 + B158DRAFT_1396 0.85 -0.1
1,440,766 - B158DRAFT_1396 0.85 +0.5
1,440,789 - B158DRAFT_1396 0.87 -0.2
1,440,834 + -0.6
1,440,873 + +0.2
1,440,911 + -0.3
1,440,931 + -0.2
1,440,939 - +0.1
1,440,939 - +0.1
1,440,939 - -0.3
1,441,055 - +0.1
1,441,145 - -0.3
1,441,204 + -0.3
1,441,221 + -0.6
1,441,221 + -0.6
1,441,229 - +0.1
1,441,268 + +0.2
1,441,340 - B158DRAFT_1397 0.10 +0.5
1,441,393 - B158DRAFT_1397 0.12 +0.1
1,441,393 - B158DRAFT_1397 0.12 -0.5
1,441,395 + B158DRAFT_1397 0.13 -0.6
1,441,395 + B158DRAFT_1397 0.13 -0.3
1,441,395 + B158DRAFT_1397 0.13 +0.2
1,441,395 + B158DRAFT_1397 0.13 +0.3
1,441,395 + B158DRAFT_1397 0.13 -0.2
1,441,395 + B158DRAFT_1397 0.13 -0.6
1,441,395 + B158DRAFT_1397 0.13 -0.5
1,441,395 + B158DRAFT_1397 0.13 -0.5
1,441,395 + B158DRAFT_1397 0.13 -2.4
1,441,403 - B158DRAFT_1397 0.13 -0.4
1,441,403 - B158DRAFT_1397 0.13 -0.4
1,441,403 - B158DRAFT_1397 0.13 -1.4
1,441,403 - B158DRAFT_1397 0.13 +0.5
1,441,403 - B158DRAFT_1397 0.13 -2.2
1,441,403 - B158DRAFT_1397 0.13 -0.1
1,441,403 - B158DRAFT_1397 0.13 +0.5
1,441,403 - B158DRAFT_1397 0.13 +1.3
1,441,403 - B158DRAFT_1397 0.13 -0.6
1,441,405 + B158DRAFT_1397 0.13 +0.3
1,441,405 + B158DRAFT_1397 0.13 +0.9
1,441,405 + B158DRAFT_1397 0.13 -1.6
1,441,405 + B158DRAFT_1397 0.13 -0.4
1,441,405 + B158DRAFT_1397 0.13 -0.2
1,441,405 + B158DRAFT_1397 0.13 -0.1
1,441,405 + B158DRAFT_1397 0.13 -0.8
1,441,405 + B158DRAFT_1397 0.13 -1.1
1,441,405 + B158DRAFT_1397 0.13 -0.3
1,441,413 - B158DRAFT_1397 0.13 -1.0
1,441,413 - B158DRAFT_1397 0.13 -0.5
1,441,413 - B158DRAFT_1397 0.13 -1.1
1,441,413 - B158DRAFT_1397 0.13 -0.2
1,441,413 - B158DRAFT_1397 0.13 -0.9
1,441,530 + B158DRAFT_1397 0.19 -0.5
1,441,538 - B158DRAFT_1397 0.19 -0.4
1,441,538 - B158DRAFT_1397 0.19 +0.2
1,441,550 - B158DRAFT_1397 0.19 -0.1
1,441,550 - B158DRAFT_1397 0.19 -0.8
1,441,577 + B158DRAFT_1397 0.21 +0.1
1,441,582 + B158DRAFT_1397 0.21 +0.7
1,441,582 + B158DRAFT_1397 0.21 +0.2
1,441,587 + B158DRAFT_1397 0.21 -0.4
1,441,587 + B158DRAFT_1397 0.21 +0.7
1,441,595 - B158DRAFT_1397 0.21 +0.1
1,441,595 - B158DRAFT_1397 0.21 +0.3
1,441,595 - B158DRAFT_1397 0.21 +0.2
1,441,595 - B158DRAFT_1397 0.21 -0.3
1,441,628 + B158DRAFT_1397 0.23 +0.0
1,441,643 + B158DRAFT_1397 0.24 -0.3
1,441,643 + B158DRAFT_1397 0.24 -0.4
1,441,643 + B158DRAFT_1397 0.24 -0.5
1,441,684 + B158DRAFT_1397 0.25 -0.3
1,441,693 + B158DRAFT_1397 0.26 -0.0
1,441,693 + B158DRAFT_1397 0.26 -0.1
1,441,693 + B158DRAFT_1397 0.26 -0.3
1,441,693 + B158DRAFT_1397 0.26 -0.0
1,441,731 - B158DRAFT_1397 0.28 -0.8
1,441,733 + B158DRAFT_1397 0.28 -0.1
1,441,741 - B158DRAFT_1397 0.28 -0.3
1,441,785 + B158DRAFT_1397 0.30 -0.1
1,441,785 + B158DRAFT_1397 0.30 -1.3
1,441,785 + B158DRAFT_1397 0.30 +0.1
1,441,785 + B158DRAFT_1397 0.30 -0.2
1,441,793 - B158DRAFT_1397 0.30 -0.3
1,441,794 + B158DRAFT_1397 0.30 -1.6
1,441,814 - B158DRAFT_1397 0.31 +0.2
1,441,828 + B158DRAFT_1397 0.32 -1.1
1,441,830 + B158DRAFT_1397 0.32 -0.1
1,441,838 - B158DRAFT_1397 0.32 -0.4
1,441,883 - B158DRAFT_1397 0.34 -0.8
1,441,885 + B158DRAFT_1397 0.34 -1.6
1,441,885 + B158DRAFT_1397 0.34 -0.7
1,441,911 + B158DRAFT_1397 0.36 -0.1
1,441,911 + B158DRAFT_1397 0.36 -0.1
1,441,911 + B158DRAFT_1397 0.36 -0.7
1,441,911 + B158DRAFT_1397 0.36 -0.2
1,441,911 + B158DRAFT_1397 0.36 +1.0
1,441,911 + B158DRAFT_1397 0.36 -0.1

Or see this region's nucleotide sequence