Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1270 and B158DRAFT_1271 are separated by 344 nucleotides B158DRAFT_1271 and B158DRAFT_1272 are separated by 105 nucleotides B158DRAFT_1272 and B158DRAFT_1273 are separated by 22 nucleotides
B158DRAFT_1270: B158DRAFT_1270 - Outer membrane receptor proteins, mostly Fe transport, at 1,311,751 to 1,313,817
_1270
B158DRAFT_1271: B158DRAFT_1271 - hypothetical protein, at 1,314,162 to 1,314,695
_1271
B158DRAFT_1272: B158DRAFT_1272 - two component transcriptional regulator, LuxR family, at 1,314,801 to 1,315,439
_1272
B158DRAFT_1273: B158DRAFT_1273 - Excinuclease ABC subunit C, at 1,315,462 to 1,317,300
_1273
Position (kb)
1314
1315
1316 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1313.861 kb on + strand at 1313.861 kb on + strand at 1313.861 kb on + strand at 1313.861 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.867 kb on + strand at 1313.874 kb on - strand at 1313.874 kb on - strand at 1313.875 kb on - strand at 1313.930 kb on - strand at 1314.025 kb on + strand at 1314.025 kb on + strand at 1314.090 kb on + strand at 1314.090 kb on + strand at 1314.137 kb on + strand at 1314.139 kb on - strand at 1314.199 kb on - strand at 1314.222 kb on - strand, within B158DRAFT_1271 at 1314.225 kb on + strand, within B158DRAFT_1271 at 1314.231 kb on + strand, within B158DRAFT_1271 at 1314.368 kb on + strand, within B158DRAFT_1271 at 1314.405 kb on - strand, within B158DRAFT_1271 at 1314.481 kb on + strand, within B158DRAFT_1271 at 1314.485 kb on + strand, within B158DRAFT_1271 at 1314.529 kb on + strand, within B158DRAFT_1271 at 1314.535 kb on + strand, within B158DRAFT_1271 at 1314.553 kb on - strand, within B158DRAFT_1271 at 1314.569 kb on + strand, within B158DRAFT_1271 at 1314.577 kb on - strand, within B158DRAFT_1271 at 1314.625 kb on + strand, within B158DRAFT_1271 at 1314.637 kb on + strand, within B158DRAFT_1271 at 1314.712 kb on - strand at 1314.721 kb on - strand at 1314.792 kb on - strand at 1314.826 kb on - strand at 1314.846 kb on + strand at 1314.846 kb on + strand at 1314.846 kb on + strand at 1314.854 kb on - strand at 1314.854 kb on - strand at 1314.854 kb on - strand at 1314.854 kb on - strand at 1314.933 kb on + strand, within B158DRAFT_1272 at 1314.934 kb on - strand, within B158DRAFT_1272 at 1314.940 kb on + strand, within B158DRAFT_1272 at 1315.005 kb on + strand, within B158DRAFT_1272 at 1315.021 kb on - strand, within B158DRAFT_1272 at 1315.032 kb on - strand, within B158DRAFT_1272 at 1315.049 kb on + strand, within B158DRAFT_1272 at 1315.054 kb on + strand, within B158DRAFT_1272 at 1315.054 kb on + strand, within B158DRAFT_1272 at 1315.057 kb on - strand, within B158DRAFT_1272 at 1315.061 kb on + strand, within B158DRAFT_1272 at 1315.062 kb on - strand, within B158DRAFT_1272 at 1315.066 kb on + strand, within B158DRAFT_1272 at 1315.069 kb on - strand, within B158DRAFT_1272 at 1315.074 kb on - strand, within B158DRAFT_1272 at 1315.076 kb on + strand, within B158DRAFT_1272 at 1315.097 kb on + strand, within B158DRAFT_1272 at 1315.114 kb on - strand, within B158DRAFT_1272 at 1315.133 kb on + strand, within B158DRAFT_1272 at 1315.133 kb on + strand, within B158DRAFT_1272 at 1315.133 kb on + strand, within B158DRAFT_1272 at 1315.133 kb on + strand, within B158DRAFT_1272 at 1315.133 kb on + strand, within B158DRAFT_1272 at 1315.133 kb on + strand, within B158DRAFT_1272 at 1315.133 kb on + strand, within B158DRAFT_1272 at 1315.141 kb on - strand, within B158DRAFT_1272 at 1315.141 kb on - strand, within B158DRAFT_1272 at 1315.141 kb on - strand, within B158DRAFT_1272 at 1315.141 kb on - strand, within B158DRAFT_1272 at 1315.141 kb on - strand, within B158DRAFT_1272 at 1315.141 kb on - strand, within B158DRAFT_1272 at 1315.174 kb on - strand, within B158DRAFT_1272 at 1315.296 kb on + strand, within B158DRAFT_1272 at 1315.319 kb on + strand, within B158DRAFT_1272 at 1315.351 kb on - strand, within B158DRAFT_1272 at 1315.440 kb on + strand at 1315.450 kb on + strand at 1315.458 kb on + strand at 1315.458 kb on - strand at 1315.458 kb on - strand at 1315.458 kb on - strand at 1315.464 kb on - strand at 1315.464 kb on - strand at 1315.482 kb on - strand at 1315.575 kb on - strand at 1315.644 kb on + strand at 1315.689 kb on - strand, within B158DRAFT_1273 at 1315.712 kb on + strand, within B158DRAFT_1273 at 1315.785 kb on + strand, within B158DRAFT_1273 at 1315.793 kb on - strand, within B158DRAFT_1273 at 1315.793 kb on - strand, within B158DRAFT_1273 at 1315.793 kb on - strand, within B158DRAFT_1273 at 1315.869 kb on + strand, within B158DRAFT_1273 at 1315.890 kb on - strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.006 kb on + strand, within B158DRAFT_1273 at 1316.009 kb on - strand, within B158DRAFT_1273 at 1316.014 kb on - strand, within B158DRAFT_1273 at 1316.014 kb on - strand, within B158DRAFT_1273 at 1316.014 kb on - strand, within B158DRAFT_1273 at 1316.014 kb on - strand, within B158DRAFT_1273 at 1316.046 kb on + strand, within B158DRAFT_1273 at 1316.082 kb on + strand, within B158DRAFT_1273 at 1316.082 kb on + strand, within B158DRAFT_1273 at 1316.090 kb on - strand, within B158DRAFT_1273 at 1316.090 kb on - strand, within B158DRAFT_1273 at 1316.090 kb on - strand, within B158DRAFT_1273 at 1316.200 kb on + strand, within B158DRAFT_1273 at 1316.208 kb on - strand, within B158DRAFT_1273 at 1316.242 kb on - strand, within B158DRAFT_1273 at 1316.253 kb on + strand, within B158DRAFT_1273 at 1316.253 kb on + strand, within B158DRAFT_1273 at 1316.253 kb on + strand, within B158DRAFT_1273 at 1316.253 kb on + strand, within B158DRAFT_1273 at 1316.261 kb on + strand, within B158DRAFT_1273 at 1316.261 kb on - strand, within B158DRAFT_1273 at 1316.271 kb on + strand, within B158DRAFT_1273 at 1316.271 kb on + strand, within B158DRAFT_1273 at 1316.281 kb on + strand, within B158DRAFT_1273 at 1316.311 kb on - strand, within B158DRAFT_1273 at 1316.346 kb on - strand, within B158DRAFT_1273 at 1316.354 kb on - strand, within B158DRAFT_1273
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 1,313,861 + +0.2 1,313,861 + +0.2 1,313,861 + +0.2 1,313,861 + -0.1 1,313,866 + -0.1 1,313,866 + +0.2 1,313,866 + +0.4 1,313,866 + +0.2 1,313,866 + +0.5 1,313,867 + +0.8 1,313,874 - +0.3 1,313,874 - +0.2 1,313,875 - +0.2 1,313,930 - -0.3 1,314,025 + -0.2 1,314,025 + +0.3 1,314,090 + +0.5 1,314,090 + -0.0 1,314,137 + +0.6 1,314,139 - +1.0 1,314,199 - -0.1 1,314,222 - B158DRAFT_1271 0.11 -0.4 1,314,225 + B158DRAFT_1271 0.12 -1.3 1,314,231 + B158DRAFT_1271 0.13 +0.1 1,314,368 + B158DRAFT_1271 0.39 +0.7 1,314,405 - B158DRAFT_1271 0.46 -0.4 1,314,481 + B158DRAFT_1271 0.60 -0.2 1,314,485 + B158DRAFT_1271 0.60 +0.0 1,314,529 + B158DRAFT_1271 0.69 -0.3 1,314,535 + B158DRAFT_1271 0.70 -0.3 1,314,553 - B158DRAFT_1271 0.73 +0.1 1,314,569 + B158DRAFT_1271 0.76 -0.1 1,314,577 - B158DRAFT_1271 0.78 +0.5 1,314,625 + B158DRAFT_1271 0.87 +0.4 1,314,637 + B158DRAFT_1271 0.89 +0.4 1,314,712 - +0.3 1,314,721 - -0.8 1,314,792 - -0.3 1,314,826 - -2.0 1,314,846 + -3.2 1,314,846 + -3.0 1,314,846 + -2.4 1,314,854 - -1.6 1,314,854 - -2.7 1,314,854 - -2.1 1,314,854 - -2.4 1,314,933 + B158DRAFT_1272 0.21 -2.4 1,314,934 - B158DRAFT_1272 0.21 -2.4 1,314,940 + B158DRAFT_1272 0.22 +0.2 1,315,005 + B158DRAFT_1272 0.32 -3.2 1,315,021 - B158DRAFT_1272 0.34 -1.5 1,315,032 - B158DRAFT_1272 0.36 -2.2 1,315,049 + B158DRAFT_1272 0.39 -2.4 1,315,054 + B158DRAFT_1272 0.40 -2.2 1,315,054 + B158DRAFT_1272 0.40 -2.7 1,315,057 - B158DRAFT_1272 0.40 -1.3 1,315,061 + B158DRAFT_1272 0.41 -2.3 1,315,062 - B158DRAFT_1272 0.41 -0.1 1,315,066 + B158DRAFT_1272 0.41 -2.9 1,315,069 - B158DRAFT_1272 0.42 -1.7 1,315,074 - B158DRAFT_1272 0.43 -2.9 1,315,076 + B158DRAFT_1272 0.43 -2.6 1,315,097 + B158DRAFT_1272 0.46 -2.0 1,315,114 - B158DRAFT_1272 0.49 -1.8 1,315,133 + B158DRAFT_1272 0.52 -2.1 1,315,133 + B158DRAFT_1272 0.52 -3.7 1,315,133 + B158DRAFT_1272 0.52 -3.5 1,315,133 + B158DRAFT_1272 0.52 -2.8 1,315,133 + B158DRAFT_1272 0.52 -2.7 1,315,133 + B158DRAFT_1272 0.52 -0.5 1,315,133 + B158DRAFT_1272 0.52 -2.7 1,315,141 - B158DRAFT_1272 0.53 -2.7 1,315,141 - B158DRAFT_1272 0.53 -2.9 1,315,141 - B158DRAFT_1272 0.53 -3.3 1,315,141 - B158DRAFT_1272 0.53 -1.6 1,315,141 - B158DRAFT_1272 0.53 -2.6 1,315,141 - B158DRAFT_1272 0.53 -2.9 1,315,174 - B158DRAFT_1272 0.58 -2.8 1,315,296 + B158DRAFT_1272 0.77 -2.9 1,315,319 + B158DRAFT_1272 0.81 -1.3 1,315,351 - B158DRAFT_1272 0.86 -3.4 1,315,440 + -0.2 1,315,450 + -0.1 1,315,458 + -0.5 1,315,458 - -0.3 1,315,458 - -0.6 1,315,458 - -0.1 1,315,464 - +0.1 1,315,464 - -1.8 1,315,482 - -2.1 1,315,575 - +0.1 1,315,644 + -0.4 1,315,689 - B158DRAFT_1273 0.12 -0.1 1,315,712 + B158DRAFT_1273 0.14 -0.4 1,315,785 + B158DRAFT_1273 0.18 -0.3 1,315,793 - B158DRAFT_1273 0.18 -0.0 1,315,793 - B158DRAFT_1273 0.18 -0.2 1,315,793 - B158DRAFT_1273 0.18 -0.4 1,315,869 + B158DRAFT_1273 0.22 -0.5 1,315,890 - B158DRAFT_1273 0.23 -0.8 1,316,006 + B158DRAFT_1273 0.30 -0.2 1,316,006 + B158DRAFT_1273 0.30 +0.1 1,316,006 + B158DRAFT_1273 0.30 -0.1 1,316,006 + B158DRAFT_1273 0.30 +0.1 1,316,006 + B158DRAFT_1273 0.30 +0.2 1,316,006 + B158DRAFT_1273 0.30 +0.2 1,316,006 + B158DRAFT_1273 0.30 -1.4 1,316,006 + B158DRAFT_1273 0.30 -0.2 1,316,006 + B158DRAFT_1273 0.30 -0.4 1,316,009 - B158DRAFT_1273 0.30 +0.1 1,316,014 - B158DRAFT_1273 0.30 +0.7 1,316,014 - B158DRAFT_1273 0.30 -1.0 1,316,014 - B158DRAFT_1273 0.30 +0.3 1,316,014 - B158DRAFT_1273 0.30 -0.1 1,316,046 + B158DRAFT_1273 0.32 -0.4 1,316,082 + B158DRAFT_1273 0.34 +0.5 1,316,082 + B158DRAFT_1273 0.34 -0.4 1,316,090 - B158DRAFT_1273 0.34 -0.0 1,316,090 - B158DRAFT_1273 0.34 +0.5 1,316,090 - B158DRAFT_1273 0.34 +0.3 1,316,200 + B158DRAFT_1273 0.40 -0.1 1,316,208 - B158DRAFT_1273 0.41 +0.4 1,316,242 - B158DRAFT_1273 0.42 -0.1 1,316,253 + B158DRAFT_1273 0.43 -0.3 1,316,253 + B158DRAFT_1273 0.43 +0.1 1,316,253 + B158DRAFT_1273 0.43 +0.1 1,316,253 + B158DRAFT_1273 0.43 +0.0 1,316,261 + B158DRAFT_1273 0.43 +0.0 1,316,261 - B158DRAFT_1273 0.43 +0.5 1,316,271 + B158DRAFT_1273 0.44 +0.0 1,316,271 + B158DRAFT_1273 0.44 -0.3 1,316,281 + B158DRAFT_1273 0.45 +0.3 1,316,311 - B158DRAFT_1273 0.46 -0.3 1,316,346 - B158DRAFT_1273 0.48 -0.3 1,316,354 - B158DRAFT_1273 0.49 -0.7
Or see this region's nucleotide sequence