Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1267 and B158DRAFT_1268 are separated by 41 nucleotides B158DRAFT_1268 and B158DRAFT_1269 are separated by 11 nucleotides
B158DRAFT_1267: B158DRAFT_1267 - Superfamily II DNA/RNA helicases, SNF2 family, at 1,302,034 to 1,304,916
_1267
B158DRAFT_1268: B158DRAFT_1268 - Adenine specific DNA methylase Mod, at 1,304,958 to 1,308,023
_1268
B158DRAFT_1269: B158DRAFT_1269 - Type III restriction enzyme, res subunit., at 1,308,035 to 1,311,379
_1269
Position (kb)
1304
1305
1306
1307
1308
1309 Strain fitness (log2 ratio)
-1
0
1 at 1304.143 kb on - strand, within B158DRAFT_1267 at 1304.145 kb on + strand, within B158DRAFT_1267 at 1304.192 kb on - strand, within B158DRAFT_1267 at 1304.208 kb on + strand, within B158DRAFT_1267 at 1304.216 kb on - strand, within B158DRAFT_1267 at 1304.340 kb on + strand, within B158DRAFT_1267 at 1304.340 kb on + strand, within B158DRAFT_1267 at 1304.340 kb on + strand, within B158DRAFT_1267 at 1304.460 kb on - strand, within B158DRAFT_1267 at 1304.653 kb on + strand at 1304.668 kb on - strand at 1304.758 kb on + strand at 1304.835 kb on + strand at 1304.973 kb on - strand at 1305.078 kb on + strand at 1305.086 kb on - strand at 1305.194 kb on + strand at 1305.202 kb on - strand at 1305.350 kb on + strand, within B158DRAFT_1268 at 1305.468 kb on - strand, within B158DRAFT_1268 at 1305.498 kb on - strand, within B158DRAFT_1268 at 1305.600 kb on + strand, within B158DRAFT_1268 at 1305.643 kb on + strand, within B158DRAFT_1268 at 1305.766 kb on - strand, within B158DRAFT_1268 at 1305.852 kb on + strand, within B158DRAFT_1268 at 1306.138 kb on + strand, within B158DRAFT_1268 at 1306.138 kb on + strand, within B158DRAFT_1268 at 1306.138 kb on + strand, within B158DRAFT_1268 at 1306.553 kb on + strand, within B158DRAFT_1268 at 1306.720 kb on - strand, within B158DRAFT_1268 at 1306.733 kb on + strand, within B158DRAFT_1268 at 1306.805 kb on + strand, within B158DRAFT_1268 at 1306.840 kb on - strand, within B158DRAFT_1268 at 1306.933 kb on - strand, within B158DRAFT_1268 at 1307.175 kb on + strand, within B158DRAFT_1268 at 1307.183 kb on - strand, within B158DRAFT_1268 at 1307.254 kb on + strand, within B158DRAFT_1268 at 1307.368 kb on - strand, within B158DRAFT_1268 at 1307.368 kb on - strand, within B158DRAFT_1268 at 1307.375 kb on - strand, within B158DRAFT_1268 at 1307.539 kb on - strand, within B158DRAFT_1268 at 1307.544 kb on - strand, within B158DRAFT_1268 at 1307.554 kb on + strand, within B158DRAFT_1268 at 1307.581 kb on - strand, within B158DRAFT_1268 at 1307.756 kb on + strand at 1307.878 kb on + strand at 1308.006 kb on + strand at 1308.164 kb on + strand at 1308.555 kb on + strand, within B158DRAFT_1269 at 1308.673 kb on - strand, within B158DRAFT_1269 at 1308.858 kb on - strand, within B158DRAFT_1269 at 1308.860 kb on + strand, within B158DRAFT_1269 at 1308.868 kb on - strand, within B158DRAFT_1269 at 1308.868 kb on - strand, within B158DRAFT_1269
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 1,304,143 - B158DRAFT_1267 0.73 +0.2 1,304,145 + B158DRAFT_1267 0.73 +0.5 1,304,192 - B158DRAFT_1267 0.75 -0.0 1,304,208 + B158DRAFT_1267 0.75 -0.2 1,304,216 - B158DRAFT_1267 0.76 -0.5 1,304,340 + B158DRAFT_1267 0.80 +0.0 1,304,340 + B158DRAFT_1267 0.80 +0.2 1,304,340 + B158DRAFT_1267 0.80 +0.1 1,304,460 - B158DRAFT_1267 0.84 -0.8 1,304,653 + +0.6 1,304,668 - -0.2 1,304,758 + -0.0 1,304,835 + -0.7 1,304,973 - -0.1 1,305,078 + -0.5 1,305,086 - -0.2 1,305,194 + +0.8 1,305,202 - -0.3 1,305,350 + B158DRAFT_1268 0.13 +0.0 1,305,468 - B158DRAFT_1268 0.17 -0.0 1,305,498 - B158DRAFT_1268 0.18 +0.2 1,305,600 + B158DRAFT_1268 0.21 -0.0 1,305,643 + B158DRAFT_1268 0.22 -0.5 1,305,766 - B158DRAFT_1268 0.26 +1.0 1,305,852 + B158DRAFT_1268 0.29 +0.1 1,306,138 + B158DRAFT_1268 0.38 -0.2 1,306,138 + B158DRAFT_1268 0.38 -0.6 1,306,138 + B158DRAFT_1268 0.38 +0.0 1,306,553 + B158DRAFT_1268 0.52 -0.0 1,306,720 - B158DRAFT_1268 0.57 -0.3 1,306,733 + B158DRAFT_1268 0.58 -1.0 1,306,805 + B158DRAFT_1268 0.60 +0.4 1,306,840 - B158DRAFT_1268 0.61 +0.0 1,306,933 - B158DRAFT_1268 0.64 +0.2 1,307,175 + B158DRAFT_1268 0.72 -0.2 1,307,183 - B158DRAFT_1268 0.73 -0.1 1,307,254 + B158DRAFT_1268 0.75 -0.2 1,307,368 - B158DRAFT_1268 0.79 -0.6 1,307,368 - B158DRAFT_1268 0.79 +0.1 1,307,375 - B158DRAFT_1268 0.79 +0.6 1,307,539 - B158DRAFT_1268 0.84 -1.2 1,307,544 - B158DRAFT_1268 0.84 -0.3 1,307,554 + B158DRAFT_1268 0.85 -0.1 1,307,581 - B158DRAFT_1268 0.86 -0.2 1,307,756 + -0.1 1,307,878 + +0.0 1,308,006 + -0.1 1,308,164 + -0.0 1,308,555 + B158DRAFT_1269 0.16 -0.2 1,308,673 - B158DRAFT_1269 0.19 +0.2 1,308,858 - B158DRAFT_1269 0.25 +0.1 1,308,860 + B158DRAFT_1269 0.25 -0.9 1,308,868 - B158DRAFT_1269 0.25 -0.3 1,308,868 - B158DRAFT_1269 0.25 +1.3
Or see this region's nucleotide sequence