Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0887 and B158DRAFT_0888 are separated by 61 nucleotides B158DRAFT_0888 and B158DRAFT_0889 are separated by 84 nucleotides B158DRAFT_0889 and B158DRAFT_0890 are separated by 194 nucleotides
B158DRAFT_0887: B158DRAFT_0887 - single-strand binding protein, at 907,310 to 907,771
_0887
B158DRAFT_0888: B158DRAFT_0888 - Integral membrane protein, interacts with FtsH, at 907,833 to 908,537
_0888
B158DRAFT_0889: B158DRAFT_0889 - Small-conductance mechanosensitive channel, at 908,622 to 909,707
_0889
B158DRAFT_0890: B158DRAFT_0890 - Phosphate-selective porin, at 909,902 to 911,038
_0890
Position (kb) 908
909
910 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 907.765 kb on + strand at 907.805 kb on + strand at 907.849 kb on + strand at 907.875 kb on + strand at 907.949 kb on + strand, within B158DRAFT_0888 at 907.957 kb on - strand, within B158DRAFT_0888 at 907.957 kb on - strand, within B158DRAFT_0888 at 907.962 kb on - strand, within B158DRAFT_0888 at 908.009 kb on + strand, within B158DRAFT_0888 at 908.152 kb on + strand, within B158DRAFT_0888 at 908.199 kb on - strand, within B158DRAFT_0888 at 908.243 kb on - strand, within B158DRAFT_0888 at 908.260 kb on + strand, within B158DRAFT_0888 at 908.280 kb on - strand, within B158DRAFT_0888 at 908.325 kb on + strand, within B158DRAFT_0888 at 908.325 kb on + strand, within B158DRAFT_0888 at 908.325 kb on + strand, within B158DRAFT_0888 at 908.333 kb on - strand, within B158DRAFT_0888 at 908.333 kb on - strand, within B158DRAFT_0888 at 908.333 kb on - strand, within B158DRAFT_0888 at 908.333 kb on - strand, within B158DRAFT_0888 at 908.379 kb on - strand, within B158DRAFT_0888 at 908.379 kb on - strand, within B158DRAFT_0888 at 908.516 kb on + strand at 908.535 kb on - strand at 908.595 kb on + strand at 908.595 kb on + strand at 908.595 kb on + strand at 908.603 kb on - strand at 908.677 kb on + strand at 908.685 kb on - strand at 908.727 kb on - strand at 908.822 kb on - strand, within B158DRAFT_0889 at 908.863 kb on - strand, within B158DRAFT_0889 at 908.877 kb on + strand, within B158DRAFT_0889 at 908.998 kb on - strand, within B158DRAFT_0889 at 909.000 kb on + strand, within B158DRAFT_0889 at 909.028 kb on - strand, within B158DRAFT_0889 at 909.043 kb on + strand, within B158DRAFT_0889 at 909.063 kb on + strand, within B158DRAFT_0889 at 909.071 kb on - strand, within B158DRAFT_0889 at 909.118 kb on + strand, within B158DRAFT_0889 at 909.145 kb on + strand, within B158DRAFT_0889 at 909.161 kb on - strand, within B158DRAFT_0889 at 909.244 kb on + strand, within B158DRAFT_0889 at 909.325 kb on - strand, within B158DRAFT_0889 at 909.346 kb on + strand, within B158DRAFT_0889 at 909.354 kb on - strand, within B158DRAFT_0889 at 909.354 kb on - strand, within B158DRAFT_0889 at 909.354 kb on - strand, within B158DRAFT_0889 at 909.370 kb on + strand, within B158DRAFT_0889 at 909.378 kb on - strand, within B158DRAFT_0889 at 909.435 kb on + strand, within B158DRAFT_0889 at 909.435 kb on + strand, within B158DRAFT_0889 at 909.435 kb on + strand, within B158DRAFT_0889 at 909.435 kb on + strand, within B158DRAFT_0889 at 909.443 kb on - strand, within B158DRAFT_0889 at 909.443 kb on - strand, within B158DRAFT_0889 at 909.443 kb on - strand, within B158DRAFT_0889 at 909.448 kb on - strand, within B158DRAFT_0889 at 909.664 kb on + strand at 909.664 kb on + strand at 909.664 kb on + strand at 909.664 kb on + strand at 909.664 kb on + strand at 909.667 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.672 kb on - strand at 909.677 kb on - strand at 909.678 kb on + strand at 909.764 kb on - strand at 909.764 kb on - strand at 909.801 kb on + strand at 909.801 kb on + strand at 909.809 kb on - strand at 909.809 kb on - strand at 910.056 kb on - strand, within B158DRAFT_0890 at 910.107 kb on + strand, within B158DRAFT_0890 at 910.161 kb on + strand, within B158DRAFT_0890 at 910.166 kb on + strand, within B158DRAFT_0890 at 910.174 kb on - strand, within B158DRAFT_0890 at 910.275 kb on - strand, within B158DRAFT_0890 at 910.456 kb on + strand, within B158DRAFT_0890
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 907,765 + -0.6 907,805 + -0.3 907,849 + -0.2 907,875 + -2.3 907,949 + B158DRAFT_0888 0.16 -0.4 907,957 - B158DRAFT_0888 0.18 -1.0 907,957 - B158DRAFT_0888 0.18 +0.3 907,962 - B158DRAFT_0888 0.18 -0.5 908,009 + B158DRAFT_0888 0.25 -0.2 908,152 + B158DRAFT_0888 0.45 -0.7 908,199 - B158DRAFT_0888 0.52 -0.2 908,243 - B158DRAFT_0888 0.58 -0.5 908,260 + B158DRAFT_0888 0.61 -0.4 908,280 - B158DRAFT_0888 0.63 -0.4 908,325 + B158DRAFT_0888 0.70 +0.1 908,325 + B158DRAFT_0888 0.70 +0.4 908,325 + B158DRAFT_0888 0.70 +0.5 908,333 - B158DRAFT_0888 0.71 -1.2 908,333 - B158DRAFT_0888 0.71 +0.2 908,333 - B158DRAFT_0888 0.71 +0.1 908,333 - B158DRAFT_0888 0.71 +0.2 908,379 - B158DRAFT_0888 0.77 -0.4 908,379 - B158DRAFT_0888 0.77 +0.1 908,516 + -0.1 908,535 - -0.6 908,595 + +0.1 908,595 + -0.0 908,595 + -0.9 908,603 - -0.1 908,677 + +0.1 908,685 - -0.2 908,727 - +0.0 908,822 - B158DRAFT_0889 0.18 -0.4 908,863 - B158DRAFT_0889 0.22 -0.6 908,877 + B158DRAFT_0889 0.23 -0.0 908,998 - B158DRAFT_0889 0.35 -0.2 909,000 + B158DRAFT_0889 0.35 +0.2 909,028 - B158DRAFT_0889 0.37 -0.2 909,043 + B158DRAFT_0889 0.39 -0.4 909,063 + B158DRAFT_0889 0.41 -0.1 909,071 - B158DRAFT_0889 0.41 -0.2 909,118 + B158DRAFT_0889 0.46 -0.4 909,145 + B158DRAFT_0889 0.48 -0.3 909,161 - B158DRAFT_0889 0.50 -0.5 909,244 + B158DRAFT_0889 0.57 -0.2 909,325 - B158DRAFT_0889 0.65 +0.1 909,346 + B158DRAFT_0889 0.67 +1.2 909,354 - B158DRAFT_0889 0.67 -0.2 909,354 - B158DRAFT_0889 0.67 -0.3 909,354 - B158DRAFT_0889 0.67 -0.4 909,370 + B158DRAFT_0889 0.69 +0.1 909,378 - B158DRAFT_0889 0.70 +0.2 909,435 + B158DRAFT_0889 0.75 -0.1 909,435 + B158DRAFT_0889 0.75 +0.3 909,435 + B158DRAFT_0889 0.75 -0.0 909,435 + B158DRAFT_0889 0.75 +0.2 909,443 - B158DRAFT_0889 0.76 +0.1 909,443 - B158DRAFT_0889 0.76 +0.2 909,443 - B158DRAFT_0889 0.76 +0.1 909,448 - B158DRAFT_0889 0.76 -0.7 909,664 + -0.0 909,664 + +0.0 909,664 + -0.0 909,664 + +0.2 909,664 + +0.4 909,667 - -0.6 909,672 - +0.2 909,672 - -0.2 909,672 - -0.2 909,672 - -0.1 909,672 - -0.9 909,672 - +0.2 909,672 - -0.6 909,672 - -0.2 909,672 - -1.1 909,677 - +0.7 909,678 + -0.1 909,764 - -1.0 909,764 - +0.1 909,801 + +0.2 909,801 + -0.4 909,809 - -0.4 909,809 - -0.6 910,056 - B158DRAFT_0890 0.14 -2.6 910,107 + B158DRAFT_0890 0.18 -2.8 910,161 + B158DRAFT_0890 0.23 -1.7 910,166 + B158DRAFT_0890 0.23 -4.7 910,174 - B158DRAFT_0890 0.24 -3.7 910,275 - B158DRAFT_0890 0.33 -2.4 910,456 + B158DRAFT_0890 0.49 -1.9
Or see this region's nucleotide sequence