Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0750

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0748 and B158DRAFT_0749 are separated by 170 nucleotidesB158DRAFT_0749 and B158DRAFT_0750 are separated by 168 nucleotidesB158DRAFT_0750 and B158DRAFT_0751 are separated by 207 nucleotidesB158DRAFT_0751 and B158DRAFT_0752 are separated by 318 nucleotides B158DRAFT_0748: B158DRAFT_0748 - ATP-dependent protease HslVU, peptidase subunit, at 752,628 to 753,167 _0748 B158DRAFT_0749: B158DRAFT_0749 - Cell division protein, at 753,338 to 753,898 _0749 B158DRAFT_0750: B158DRAFT_0750 - replication restart DNA helicase PriA, at 754,067 to 756,259 _0750 B158DRAFT_0751: B158DRAFT_0751 - hypothetical protein, at 756,467 to 756,778 _0751 B158DRAFT_0752: B158DRAFT_0752 - hypothetical protein, at 757,097 to 757,627 _0752 Position (kb) 754 755 756 757Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 753.103 kb on + strand, within B158DRAFT_0748at 753.103 kb on + strand, within B158DRAFT_0748at 753.113 kb on + strand, within B158DRAFT_0748at 753.185 kb on + strandat 753.185 kb on + strandat 753.185 kb on + strandat 753.185 kb on + strandat 753.193 kb on - strandat 753.193 kb on - strandat 753.193 kb on - strandat 753.193 kb on - strandat 753.210 kb on + strandat 753.218 kb on - strandat 753.313 kb on + strandat 753.313 kb on + strandat 753.313 kb on + strandat 753.875 kb on - strandat 753.906 kb on - strandat 753.908 kb on - strandat 754.023 kb on + strandat 754.031 kb on - strandat 754.050 kb on + strandat 754.116 kb on - strandat 754.208 kb on + strandat 754.208 kb on + strandat 754.237 kb on - strandat 754.246 kb on + strandat 754.246 kb on + strandat 754.246 kb on + strandat 754.246 kb on + strandat 754.306 kb on + strand, within B158DRAFT_0750at 754.330 kb on - strand, within B158DRAFT_0750at 754.378 kb on - strand, within B158DRAFT_0750at 754.395 kb on - strand, within B158DRAFT_0750at 754.433 kb on - strand, within B158DRAFT_0750at 754.450 kb on + strand, within B158DRAFT_0750at 754.458 kb on - strand, within B158DRAFT_0750at 754.548 kb on + strand, within B158DRAFT_0750at 754.556 kb on - strand, within B158DRAFT_0750at 754.584 kb on - strand, within B158DRAFT_0750at 754.606 kb on + strand, within B158DRAFT_0750at 754.623 kb on + strand, within B158DRAFT_0750at 754.623 kb on + strand, within B158DRAFT_0750at 754.624 kb on - strand, within B158DRAFT_0750at 754.641 kb on - strand, within B158DRAFT_0750at 754.688 kb on + strand, within B158DRAFT_0750at 754.696 kb on - strand, within B158DRAFT_0750at 754.696 kb on - strand, within B158DRAFT_0750at 754.713 kb on + strand, within B158DRAFT_0750at 754.721 kb on - strand, within B158DRAFT_0750at 754.760 kb on + strand, within B158DRAFT_0750at 754.768 kb on - strand, within B158DRAFT_0750at 754.768 kb on - strand, within B158DRAFT_0750at 754.785 kb on + strand, within B158DRAFT_0750at 754.800 kb on - strand, within B158DRAFT_0750at 754.800 kb on - strand, within B158DRAFT_0750at 754.815 kb on + strand, within B158DRAFT_0750at 754.823 kb on - strand, within B158DRAFT_0750at 754.907 kb on - strand, within B158DRAFT_0750at 754.907 kb on - strand, within B158DRAFT_0750at 754.914 kb on - strand, within B158DRAFT_0750at 755.071 kb on + strand, within B158DRAFT_0750at 755.079 kb on - strand, within B158DRAFT_0750at 755.142 kb on + strand, within B158DRAFT_0750at 755.150 kb on - strand, within B158DRAFT_0750at 755.152 kb on + strand, within B158DRAFT_0750at 755.190 kb on - strand, within B158DRAFT_0750at 755.192 kb on + strand, within B158DRAFT_0750at 755.192 kb on + strand, within B158DRAFT_0750at 755.192 kb on + strand, within B158DRAFT_0750at 755.192 kb on + strand, within B158DRAFT_0750at 755.200 kb on - strand, within B158DRAFT_0750at 755.200 kb on - strand, within B158DRAFT_0750at 755.262 kb on + strand, within B158DRAFT_0750at 755.272 kb on + strand, within B158DRAFT_0750at 755.293 kb on - strand, within B158DRAFT_0750at 755.373 kb on - strand, within B158DRAFT_0750at 755.474 kb on + strand, within B158DRAFT_0750at 755.528 kb on + strand, within B158DRAFT_0750at 755.529 kb on + strand, within B158DRAFT_0750at 755.529 kb on + strand, within B158DRAFT_0750at 755.537 kb on - strand, within B158DRAFT_0750at 755.578 kb on + strand, within B158DRAFT_0750at 755.601 kb on + strand, within B158DRAFT_0750at 755.601 kb on + strand, within B158DRAFT_0750at 755.645 kb on + strand, within B158DRAFT_0750at 755.663 kb on - strand, within B158DRAFT_0750at 755.663 kb on - strand, within B158DRAFT_0750at 755.663 kb on - strand, within B158DRAFT_0750at 755.824 kb on + strand, within B158DRAFT_0750at 755.830 kb on - strand, within B158DRAFT_0750at 755.878 kb on + strand, within B158DRAFT_0750at 755.901 kb on - strand, within B158DRAFT_0750at 755.918 kb on - strand, within B158DRAFT_0750at 755.920 kb on - strand, within B158DRAFT_0750at 755.925 kb on + strand, within B158DRAFT_0750at 755.939 kb on - strand, within B158DRAFT_0750at 756.136 kb on - strandat 756.136 kb on - strandat 756.174 kb on + strandat 756.174 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.243 kb on + strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.251 kb on - strandat 756.256 kb on - strandat 756.305 kb on - strandat 756.404 kb on + strandat 756.412 kb on - strandat 756.448 kb on + strandat 756.502 kb on + strand, within B158DRAFT_0751at 756.531 kb on + strand, within B158DRAFT_0751at 756.533 kb on + strand, within B158DRAFT_0751at 756.541 kb on - strand, within B158DRAFT_0751at 756.573 kb on - strand, within B158DRAFT_0751at 756.580 kb on - strand, within B158DRAFT_0751at 756.731 kb on + strand, within B158DRAFT_0751at 756.739 kb on - strand, within B158DRAFT_0751at 756.739 kb on - strand, within B158DRAFT_0751at 756.739 kb on - strand, within B158DRAFT_0751at 756.766 kb on + strandat 756.866 kb on + strandat 756.866 kb on + strandat 757.162 kb on + strand, within B158DRAFT_0752at 757.165 kb on - strand, within B158DRAFT_0752at 757.165 kb on - strand, within B158DRAFT_0752at 757.187 kb on + strand, within B158DRAFT_0752at 757.192 kb on + strand, within B158DRAFT_0752

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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753,103 + B158DRAFT_0748 0.88 -0.7
753,103 + B158DRAFT_0748 0.88 -0.5
753,113 + B158DRAFT_0748 0.90 -0.0
753,185 + -0.5
753,185 + -0.6
753,185 + -0.2
753,185 + +0.1
753,193 - -0.9
753,193 - -0.6
753,193 - -2.9
753,193 - -0.6
753,210 + -0.3
753,218 - -0.6
753,313 + -0.8
753,313 + +0.6
753,313 + +0.2
753,875 - -1.8
753,906 - +0.0
753,908 - +0.1
754,023 + +0.1
754,031 - -0.2
754,050 + +0.0
754,116 - -2.5
754,208 + +0.2
754,208 + -1.8
754,237 - -3.3
754,246 + -2.9
754,246 + -1.5
754,246 + -3.3
754,246 + -1.5
754,306 + B158DRAFT_0750 0.11 -2.4
754,330 - B158DRAFT_0750 0.12 -0.8
754,378 - B158DRAFT_0750 0.14 -1.5
754,395 - B158DRAFT_0750 0.15 -2.2
754,433 - B158DRAFT_0750 0.17 -2.4
754,450 + B158DRAFT_0750 0.17 -2.5
754,458 - B158DRAFT_0750 0.18 -2.2
754,548 + B158DRAFT_0750 0.22 -1.1
754,556 - B158DRAFT_0750 0.22 -1.7
754,584 - B158DRAFT_0750 0.24 -2.4
754,606 + B158DRAFT_0750 0.25 -0.2
754,623 + B158DRAFT_0750 0.25 -1.5
754,623 + B158DRAFT_0750 0.25 -2.9
754,624 - B158DRAFT_0750 0.25 -0.8
754,641 - B158DRAFT_0750 0.26 -2.9
754,688 + B158DRAFT_0750 0.28 -2.0
754,696 - B158DRAFT_0750 0.29 -1.2
754,696 - B158DRAFT_0750 0.29 -2.2
754,713 + B158DRAFT_0750 0.29 -1.8
754,721 - B158DRAFT_0750 0.30 -2.5
754,760 + B158DRAFT_0750 0.32 -1.0
754,768 - B158DRAFT_0750 0.32 -1.8
754,768 - B158DRAFT_0750 0.32 -2.1
754,785 + B158DRAFT_0750 0.33 -1.5
754,800 - B158DRAFT_0750 0.33 -2.0
754,800 - B158DRAFT_0750 0.33 -1.8
754,815 + B158DRAFT_0750 0.34 -2.8
754,823 - B158DRAFT_0750 0.34 -1.5
754,907 - B158DRAFT_0750 0.38 -0.0
754,907 - B158DRAFT_0750 0.38 -2.0
754,914 - B158DRAFT_0750 0.39 -3.1
755,071 + B158DRAFT_0750 0.46 -2.2
755,079 - B158DRAFT_0750 0.46 -1.8
755,142 + B158DRAFT_0750 0.49 -1.8
755,150 - B158DRAFT_0750 0.49 -1.8
755,152 + B158DRAFT_0750 0.49 -2.0
755,190 - B158DRAFT_0750 0.51 -1.5
755,192 + B158DRAFT_0750 0.51 -4.2
755,192 + B158DRAFT_0750 0.51 -1.8
755,192 + B158DRAFT_0750 0.51 -0.8
755,192 + B158DRAFT_0750 0.51 -3.9
755,200 - B158DRAFT_0750 0.52 -2.7
755,200 - B158DRAFT_0750 0.52 -3.5
755,262 + B158DRAFT_0750 0.54 -1.5
755,272 + B158DRAFT_0750 0.55 -1.5
755,293 - B158DRAFT_0750 0.56 -1.5
755,373 - B158DRAFT_0750 0.60 -3.5
755,474 + B158DRAFT_0750 0.64 -3.3
755,528 + B158DRAFT_0750 0.67 -2.8
755,529 + B158DRAFT_0750 0.67 -0.8
755,529 + B158DRAFT_0750 0.67 -2.2
755,537 - B158DRAFT_0750 0.67 -2.8
755,578 + B158DRAFT_0750 0.69 -2.2
755,601 + B158DRAFT_0750 0.70 -2.4
755,601 + B158DRAFT_0750 0.70 -2.0
755,645 + B158DRAFT_0750 0.72 -1.5
755,663 - B158DRAFT_0750 0.73 +0.6
755,663 - B158DRAFT_0750 0.73 -3.6
755,663 - B158DRAFT_0750 0.73 +0.1
755,824 + B158DRAFT_0750 0.80 -2.2
755,830 - B158DRAFT_0750 0.80 -1.5
755,878 + B158DRAFT_0750 0.83 -2.2
755,901 - B158DRAFT_0750 0.84 -3.0
755,918 - B158DRAFT_0750 0.84 -2.7
755,920 - B158DRAFT_0750 0.84 -0.2
755,925 + B158DRAFT_0750 0.85 -1.8
755,939 - B158DRAFT_0750 0.85 -2.4
756,136 - -3.5
756,136 - -1.8
756,174 + -2.6
756,174 + -2.8
756,243 + -3.2
756,243 + -1.8
756,243 + -1.8
756,243 + -2.4
756,243 + -1.2
756,251 - -0.0
756,251 - -0.3
756,251 - +0.6
756,251 - +0.3
756,251 - +0.1
756,251 - -0.1
756,251 - -0.5
756,256 - -0.4
756,305 - -0.0
756,404 + -0.5
756,412 - -0.2
756,448 + -0.8
756,502 + B158DRAFT_0751 0.11 -0.3
756,531 + B158DRAFT_0751 0.21 -0.4
756,533 + B158DRAFT_0751 0.21 -0.5
756,541 - B158DRAFT_0751 0.24 -0.5
756,573 - B158DRAFT_0751 0.34 -0.6
756,580 - B158DRAFT_0751 0.36 -0.5
756,731 + B158DRAFT_0751 0.85 -0.3
756,739 - B158DRAFT_0751 0.87 -0.6
756,739 - B158DRAFT_0751 0.87 +0.3
756,739 - B158DRAFT_0751 0.87 +0.2
756,766 + -0.1
756,866 + -0.4
756,866 + -0.4
757,162 + B158DRAFT_0752 0.12 -0.3
757,165 - B158DRAFT_0752 0.13 -0.5
757,165 - B158DRAFT_0752 0.13 -0.4
757,187 + B158DRAFT_0752 0.17 +0.3
757,192 + B158DRAFT_0752 0.18 -0.3

Or see this region's nucleotide sequence