Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0715 and B158DRAFT_0716 are separated by 92 nucleotides B158DRAFT_0716 and B158DRAFT_0717 are separated by 122 nucleotides B158DRAFT_0717 and B158DRAFT_0718 are separated by 435 nucleotides
B158DRAFT_0715: B158DRAFT_0715 - Signal transduction histidine kinase, nitrogen specific, at 713,534 to 714,595
_0715
B158DRAFT_0716: B158DRAFT_0716 - hypothetical protein, at 714,688 to 715,239
_0716
B158DRAFT_0717: B158DRAFT_0717 - glutamine synthetase, type I, at 715,362 to 716,771
_0717
B158DRAFT_0718: B158DRAFT_0718 - Outer membrane receptor proteins, mostly Fe transport, at 717,207 to 719,888
_0718
Position (kb) 715
716
717 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 714.478 kb on + strand, within B158DRAFT_0715 at 714.478 kb on + strand, within B158DRAFT_0715 at 714.486 kb on - strand, within B158DRAFT_0715 at 714.548 kb on - strand at 714.548 kb on - strand at 714.561 kb on + strand at 714.566 kb on - strand at 714.569 kb on - strand at 714.628 kb on - strand at 714.677 kb on - strand at 714.694 kb on + strand at 714.694 kb on + strand at 714.694 kb on + strand at 714.694 kb on + strand at 714.694 kb on + strand at 714.699 kb on + strand at 714.699 kb on + strand at 714.699 kb on + strand at 714.699 kb on + strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.702 kb on - strand at 714.707 kb on - strand at 714.707 kb on - strand at 714.715 kb on - strand at 714.724 kb on + strand at 714.739 kb on + strand at 714.789 kb on + strand, within B158DRAFT_0716 at 714.789 kb on + strand, within B158DRAFT_0716 at 714.809 kb on - strand, within B158DRAFT_0716 at 714.849 kb on + strand, within B158DRAFT_0716 at 714.849 kb on + strand, within B158DRAFT_0716 at 714.857 kb on - strand, within B158DRAFT_0716 at 714.887 kb on + strand, within B158DRAFT_0716 at 714.900 kb on + strand, within B158DRAFT_0716 at 714.900 kb on + strand, within B158DRAFT_0716 at 714.900 kb on + strand, within B158DRAFT_0716 at 714.900 kb on + strand, within B158DRAFT_0716 at 714.900 kb on + strand, within B158DRAFT_0716 at 714.908 kb on - strand, within B158DRAFT_0716 at 714.908 kb on - strand, within B158DRAFT_0716 at 714.908 kb on - strand, within B158DRAFT_0716 at 714.908 kb on - strand, within B158DRAFT_0716 at 714.910 kb on - strand, within B158DRAFT_0716 at 715.013 kb on + strand, within B158DRAFT_0716 at 715.180 kb on + strand, within B158DRAFT_0716 at 715.252 kb on + strand at 715.252 kb on + strand at 715.260 kb on - strand at 715.278 kb on + strand at 715.278 kb on + strand at 715.286 kb on - strand at 715.286 kb on - strand at 715.286 kb on - strand at 716.777 kb on - strand at 716.841 kb on + strand at 716.841 kb on + strand at 716.841 kb on + strand at 716.841 kb on + strand at 716.849 kb on - strand at 716.849 kb on - strand at 716.849 kb on - strand at 716.849 kb on - strand at 717.006 kb on + strand at 717.014 kb on - strand at 717.015 kb on - strand at 717.094 kb on + strand at 717.114 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 714,478 + B158DRAFT_0715 0.89 -2.0 714,478 + B158DRAFT_0715 0.89 -1.4 714,486 - B158DRAFT_0715 0.90 -3.0 714,548 - +0.4 714,548 - -0.8 714,561 + -1.8 714,566 - -0.3 714,569 - -0.6 714,628 - -0.1 714,677 - -0.2 714,694 + +0.2 714,694 + -0.3 714,694 + -0.3 714,694 + -0.6 714,694 + +0.4 714,699 + -0.3 714,699 + +0.2 714,699 + +0.5 714,699 + -0.5 714,702 - +0.1 714,702 - -0.7 714,702 - +0.1 714,702 - +0.1 714,702 - -0.4 714,702 - +0.2 714,702 - -0.0 714,702 - +0.3 714,702 - +0.1 714,702 - -0.0 714,707 - +0.8 714,707 - -0.7 714,715 - +0.1 714,724 + -0.3 714,739 + -0.3 714,789 + B158DRAFT_0716 0.18 +1.8 714,789 + B158DRAFT_0716 0.18 -0.3 714,809 - B158DRAFT_0716 0.22 +0.2 714,849 + B158DRAFT_0716 0.29 -0.1 714,849 + B158DRAFT_0716 0.29 -0.0 714,857 - B158DRAFT_0716 0.31 -0.1 714,887 + B158DRAFT_0716 0.36 -1.7 714,900 + B158DRAFT_0716 0.38 -0.5 714,900 + B158DRAFT_0716 0.38 +0.0 714,900 + B158DRAFT_0716 0.38 +0.4 714,900 + B158DRAFT_0716 0.38 +0.6 714,900 + B158DRAFT_0716 0.38 +0.4 714,908 - B158DRAFT_0716 0.40 -1.0 714,908 - B158DRAFT_0716 0.40 +0.2 714,908 - B158DRAFT_0716 0.40 -0.3 714,908 - B158DRAFT_0716 0.40 +0.6 714,910 - B158DRAFT_0716 0.40 +0.9 715,013 + B158DRAFT_0716 0.59 +0.4 715,180 + B158DRAFT_0716 0.89 +0.4 715,252 + +0.3 715,252 + +0.1 715,260 - +0.2 715,278 + +0.1 715,278 + +0.1 715,286 - +0.0 715,286 - +0.1 715,286 - -1.1 716,777 - -0.2 716,841 + -0.8 716,841 + -1.5 716,841 + -0.3 716,841 + -1.0 716,849 - -1.5 716,849 - -1.1 716,849 - -0.8 716,849 - -0.7 717,006 + +0.8 717,014 - +0.3 717,015 - +1.0 717,094 + +0.1 717,114 + +1.1
Or see this region's nucleotide sequence