Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0713

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0712 and B158DRAFT_0713 are separated by 17 nucleotidesB158DRAFT_0713 and B158DRAFT_0714 are separated by 0 nucleotidesB158DRAFT_0714 and B158DRAFT_0715 overlap by 4 nucleotides B158DRAFT_0712: B158DRAFT_0712 - Glycerol-3-phosphate dehydrogenase, at 711,439 to 712,449 _0712 B158DRAFT_0713: B158DRAFT_0713 - rRNA methylase, putative, group 2, at 712,467 to 712,928 _0713 B158DRAFT_0714: B158DRAFT_0714 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 712,929 to 713,537 _0714 B158DRAFT_0715: B158DRAFT_0715 - Signal transduction histidine kinase, nitrogen specific, at 713,534 to 714,595 _0715 Position (kb) 712 713Strain fitness (log2 ratio) -3 -2 -1 0 1at 712.446 kb on - strandat 712.446 kb on - strandat 712.447 kb on - strandat 712.477 kb on + strandat 712.536 kb on + strand, within B158DRAFT_0713at 712.543 kb on - strand, within B158DRAFT_0713at 712.543 kb on - strand, within B158DRAFT_0713at 712.585 kb on + strand, within B158DRAFT_0713at 712.616 kb on - strand, within B158DRAFT_0713at 712.725 kb on + strand, within B158DRAFT_0713at 712.753 kb on + strand, within B158DRAFT_0713at 712.778 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.779 kb on + strand, within B158DRAFT_0713at 712.787 kb on - strand, within B158DRAFT_0713at 712.938 kb on + strandat 712.961 kb on - strandat 712.961 kb on - strandat 712.969 kb on - strandat 713.090 kb on - strand, within B158DRAFT_0714at 713.104 kb on + strand, within B158DRAFT_0714at 713.109 kb on + strand, within B158DRAFT_0714at 713.158 kb on + strand, within B158DRAFT_0714at 713.175 kb on + strand, within B158DRAFT_0714at 713.175 kb on + strand, within B158DRAFT_0714at 713.183 kb on - strand, within B158DRAFT_0714at 713.207 kb on + strand, within B158DRAFT_0714at 713.214 kb on + strand, within B158DRAFT_0714at 713.215 kb on - strand, within B158DRAFT_0714at 713.249 kb on + strand, within B158DRAFT_0714at 713.249 kb on + strand, within B158DRAFT_0714at 713.342 kb on + strand, within B158DRAFT_0714at 713.342 kb on + strand, within B158DRAFT_0714at 713.342 kb on + strand, within B158DRAFT_0714at 713.365 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.401 kb on + strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.409 kb on - strand, within B158DRAFT_0714at 713.412 kb on + strand, within B158DRAFT_0714at 713.439 kb on + strand, within B158DRAFT_0714at 713.446 kb on + strand, within B158DRAFT_0714at 713.446 kb on + strand, within B158DRAFT_0714at 713.454 kb on - strand, within B158DRAFT_0714at 713.466 kb on - strand, within B158DRAFT_0714at 713.475 kb on + strand, within B158DRAFT_0714at 713.483 kb on - strandat 713.646 kb on - strand, within B158DRAFT_0715at 713.736 kb on + strand, within B158DRAFT_0715at 713.764 kb on + strand, within B158DRAFT_0715at 713.772 kb on - strand, within B158DRAFT_0715at 713.874 kb on + strand, within B158DRAFT_0715at 713.874 kb on + strand, within B158DRAFT_0715at 713.876 kb on + strand, within B158DRAFT_0715at 713.882 kb on - strand, within B158DRAFT_0715at 713.882 kb on - strand, within B158DRAFT_0715at 713.882 kb on - strand, within B158DRAFT_0715at 713.882 kb on - strand, within B158DRAFT_0715at 713.882 kb on - strand, within B158DRAFT_0715at 713.882 kb on - strand, within B158DRAFT_0715at 713.882 kb on - strand, within B158DRAFT_0715

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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712,446 - -0.7
712,446 - -0.0
712,447 - -1.2
712,477 + +0.1
712,536 + B158DRAFT_0713 0.15 -0.1
712,543 - B158DRAFT_0713 0.16 +0.2
712,543 - B158DRAFT_0713 0.16 -0.2
712,585 + B158DRAFT_0713 0.26 +0.0
712,616 - B158DRAFT_0713 0.32 -0.5
712,725 + B158DRAFT_0713 0.56 -2.5
712,753 + B158DRAFT_0713 0.62 +0.3
712,778 + B158DRAFT_0713 0.67 -0.0
712,779 + B158DRAFT_0713 0.68 +0.0
712,779 + B158DRAFT_0713 0.68 -0.6
712,779 + B158DRAFT_0713 0.68 +0.5
712,779 + B158DRAFT_0713 0.68 +1.3
712,779 + B158DRAFT_0713 0.68 +0.1
712,787 - B158DRAFT_0713 0.69 -0.4
712,938 + -0.5
712,961 - -1.2
712,961 - -1.2
712,969 - -2.3
713,090 - B158DRAFT_0714 0.26 -3.3
713,104 + B158DRAFT_0714 0.29 -0.2
713,109 + B158DRAFT_0714 0.30 -3.0
713,158 + B158DRAFT_0714 0.38 -1.5
713,175 + B158DRAFT_0714 0.40 -1.9
713,175 + B158DRAFT_0714 0.40 -0.0
713,183 - B158DRAFT_0714 0.42 -2.7
713,207 + B158DRAFT_0714 0.46 -0.2
713,214 + B158DRAFT_0714 0.47 -2.7
713,215 - B158DRAFT_0714 0.47 -2.4
713,249 + B158DRAFT_0714 0.53 -1.8
713,249 + B158DRAFT_0714 0.53 -1.8
713,342 + B158DRAFT_0714 0.68 -1.9
713,342 + B158DRAFT_0714 0.68 -1.1
713,342 + B158DRAFT_0714 0.68 -2.3
713,365 + B158DRAFT_0714 0.72 -1.9
713,401 + B158DRAFT_0714 0.78 -2.9
713,401 + B158DRAFT_0714 0.78 -1.8
713,401 + B158DRAFT_0714 0.78 -1.2
713,401 + B158DRAFT_0714 0.78 -2.3
713,401 + B158DRAFT_0714 0.78 -1.6
713,409 - B158DRAFT_0714 0.79 -1.6
713,409 - B158DRAFT_0714 0.79 -1.9
713,409 - B158DRAFT_0714 0.79 -1.2
713,409 - B158DRAFT_0714 0.79 -2.8
713,409 - B158DRAFT_0714 0.79 -2.7
713,409 - B158DRAFT_0714 0.79 -3.0
713,412 + B158DRAFT_0714 0.79 -1.7
713,439 + B158DRAFT_0714 0.84 -1.9
713,446 + B158DRAFT_0714 0.85 -1.9
713,446 + B158DRAFT_0714 0.85 -1.7
713,454 - B158DRAFT_0714 0.86 -3.5
713,466 - B158DRAFT_0714 0.88 -3.4
713,475 + B158DRAFT_0714 0.90 -1.5
713,483 - -1.2
713,646 - B158DRAFT_0715 0.11 -0.8
713,736 + B158DRAFT_0715 0.19 -1.4
713,764 + B158DRAFT_0715 0.22 -3.0
713,772 - B158DRAFT_0715 0.22 -0.8
713,874 + B158DRAFT_0715 0.32 -0.0
713,874 + B158DRAFT_0715 0.32 -1.0
713,876 + B158DRAFT_0715 0.32 -1.8
713,882 - B158DRAFT_0715 0.33 -2.5
713,882 - B158DRAFT_0715 0.33 -0.4
713,882 - B158DRAFT_0715 0.33 -1.4
713,882 - B158DRAFT_0715 0.33 -1.1
713,882 - B158DRAFT_0715 0.33 -2.0
713,882 - B158DRAFT_0715 0.33 -0.6
713,882 - B158DRAFT_0715 0.33 -1.3

Or see this region's nucleotide sequence